Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30310
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   6.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   6.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -1

Query: 417 LRAPPEELSPPRALPAPVPQSRASVF*G--PSHRTFVAGKDLITKDM 283
           ++A PE++S  R  P P        F G    +R F A     T+D+
Sbjct: 513 IKADPEKISAIRNFPVPQKTKHVRAFLGLCNFYRKFCARYSAATQDL 559


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 265 EDITTRHIFSYKILSCDE 318
           E+  TRH+   +I+ CD+
Sbjct: 250 EEYVTRHLIDGRIIGCDQ 267


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/65 (20%), Positives = 31/65 (47%)
 Frame = -3

Query: 223 AVIVFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVF 44
           +++   +  ++  FS +TV+  +   +++ C+L +K      LV    TF      +L +
Sbjct: 63  SIVAMVMGTIVNAFSCYTVLAPVLCKRQQYCQLMSKLLGNHQLVYNCHTFGRFLAPNLTY 122

Query: 43  VFLCL 29
           + + L
Sbjct: 123 LLVAL 127



 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -3

Query: 205 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 86
           ++ VL ++ DF+     +  K  + ++     T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 179 AEVTKDCMDPEDDDGMIPY 235
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 179 AEVTKDCMDPEDDDGMIPY 235
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = -3

Query: 214 VFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVFVFL 35
           +F   A+ CDF    VV ++   +KR   ++ K   + ++V     F  ++  +++FV L
Sbjct: 74  IFFFFAICCDFIALIVVNIVHVFRKR--RVNYKDSNIGLVV--ANAFFLLWTPAVIFVVL 129


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 172 TVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 62
           T  K L   K+ V  L      +F+L   + TF +IF
Sbjct: 80  TKAKNLLYSKQIVTILKKTKSNIFILKESVDTFNDIF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,665
Number of Sequences: 336
Number of extensions: 1967
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)