Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30309
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.13 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.13 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   3.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 249 PDGKFGIPQKAIDSVNANKIGLKGPLMTPVGKG 347
           P    GIP   +DS  A  +GL  P M P   G
Sbjct: 138 PPAHMGIPPYQLDSKTAGSMGLTRPPMYPFPAG 170


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 249 PDGKFGIPQKAIDSVNANKIGLKGPLMTPVGKG 347
           P    GIP   +DS  A  +GL  P M P   G
Sbjct: 30  PPAHMGIPPYQLDSKTAGSMGLTRPPMYPFPAG 62


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 104 SSAGSGRWHNFPDYSCSHFKNFRKLRRRAVTRG 6
           ++A    W N  DY     + F + R R V RG
Sbjct: 542 AAAAERLWTNPSDYVKQTERRFYRHRERLVARG 574


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
 Frame = +2

Query: 68  QENCASDQSRRCSVQHWRAQ-GY-AHPWTWY 154
           Q+  ASD      V +WR   G   H W W+
Sbjct: 181 QDFTASDLDEEHRVAYWREDIGLNLHHWHWH 211


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 247 PLTAVTSTSSHSIGTLAASKIF*TATVISGPI 152
           P+  VTS   +   +  + K+F +  +ISG I
Sbjct: 211 PVNGVTSEKCNLTFSWYSKKVFYSKIIISGSI 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,854
Number of Sequences: 336
Number of extensions: 2349
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)