Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30309
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...   223   6e-59
Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical pr...   101   2e-22
AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical ...    99   9e-22
Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical pr...    97   9e-21
Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score =  223 bits (545), Expect = 6e-59
 Identities = 108/155 (69%), Positives = 128/155 (82%), Gaps = 1/155 (0%)
 Frame = +3

Query: 51  MAARIIRKIVPATRAGAAQYSTG-VRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEV 227
           M  + I+K   +T   + +YS+G VR+VTLIPG GIGPEI+ +VQKIFEAA  PI W+ V
Sbjct: 1   MLGKCIKK-ASSTVGQSIRYSSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPV 59

Query: 228 DVTAVRGPDGKFGIPQKAIDSVNANKIGLKGPLMTPVGKGYRSLNLALRKEFDLYANVRP 407
           DVT V+G DG F IP + I+ ++ANK+GLKGPL TP+GKG+RSLNLA+RKEF LYANVRP
Sbjct: 60  DVTPVKGRDGVFRIPSRCIELMHANKVGLKGPLETPIGKGHRSLNLAVRKEFSLYANVRP 119

Query: 408 CKSLEGIKTLYDNVDVVTIRENTEGEYSGIEHEIV 512
           C+SLEG KTLYDNVDVVTIRENTEGEYSGIEHEIV
Sbjct: 120 CRSLEGHKTLYDNVDVVTIRENTEGEYSGIEHEIV 154


>Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical
           protein F35G12.2 protein.
          Length = 396

 Score =  101 bits (243), Expect = 2e-22
 Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
 Frame = +3

Query: 102 AQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKA 281
           A+Y  G   VT++PG GIGPE+   V++I  A + P+++E V++T+            +A
Sbjct: 46  ARYG-GRHNVTVLPGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDASEDLA---EA 101

Query: 282 IDSVNANKIGLKGPLMTPVGK-GYRSLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVV 458
           I ++  N + LKG + T      + S NL LR++ +LYANV  C ++  + + +  +D+V
Sbjct: 102 ITAIKRNGVALKGNIETKFDNPSFVSRNLELRRQLNLYANVLHCSTIPTVPSRHTGIDMV 161

Query: 459 TIRENTEGEYSGIEHEIVD 515
            IRENTEGEYSG EHE V+
Sbjct: 162 IIRENTEGEYSGNEHEAVN 180


>AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical
           protein C30F12.7 protein.
          Length = 373

 Score =   99 bits (238), Expect = 9e-22
 Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
 Frame = +3

Query: 78  VPATRAGAAQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDG 257
           +P  R   A+Y  G   V  +PG GIGPE+   ++ IF     P+ +EEV V++    DG
Sbjct: 22  IPGHRLPLAKYG-GRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVSSSL-LDG 79

Query: 258 KFGIPQKAIDSVNANKIGLKGPLMTPVGKG-YRSLNLALRKEFDLYANVRPCKSLEGIKT 434
                  AI+    N + +KG + T      + S N+ LR + DLYAN+  C ++  + T
Sbjct: 80  DMDAAMLAIER---NGVAIKGNIETKHDDPQFNSRNVELRTKLDLYANILHCVTIPTVPT 136

Query: 435 LYDNVDVVTIRENTEGEYSGIEHEIV 512
            +  +D+V IRENTEGEYSG+EHE V
Sbjct: 137 RHSGIDIVLIRENTEGEYSGLEHEAV 162


>Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical
           protein C37E2.1 protein.
          Length = 379

 Score = 96.7 bits (230), Expect = 9e-21
 Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 6/135 (4%)
 Frame = +3

Query: 126 KVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKAIDSVNA-N 302
           KVT+IPG G+GPE+   VQ I +   +PIE+EE+ ++ V     +    + A++S+   N
Sbjct: 44  KVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYT--RSSSIENAVESIGRNN 101

Query: 303 KIGLKGPL----MTPVGKGYRSLNLALRKEFDLYANVRPCKSLEGIKTLY-DNVDVVTIR 467
            + LKG +    +       + LN+ LR+  DL+ANV   K+L+GIKT +   +D V +R
Sbjct: 102 NVALKGAIEESAVLHTEGELQGLNMRLRRSLDLFANVVHIKTLDGIKTRHGKQLDFVIVR 161

Query: 468 ENTEGEYSGIEHEIV 512
           E TEGEYS +EHE+V
Sbjct: 162 EQTEGEYSSLEHELV 176


>Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical
           protein B0035.1b protein.
          Length = 341

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 322 GPFKPILLAFTESIAFWGIPNLPSGP 245
           GP  P  + F +   F G+P +PSGP
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPPMPSGP 133


>Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical
           protein B0035.1a protein.
          Length = 298

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 322 GPFKPILLAFTESIAFWGIPNLPSGP 245
           GP  P  + F +   F G+P +PSGP
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPPMPSGP 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,800,748
Number of Sequences: 27780
Number of extensions: 243937
Number of successful extensions: 818
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)