Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30308
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 45 3e-05
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 36 0.016
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 35 0.037
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 34 0.049
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 34 0.049
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 34 0.049
At5g39420.1 68418.m04775 protein kinase family protein contains ... 34 0.065
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 34 0.065
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 34 0.065
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 34 0.065
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 34 0.065
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 34 0.065
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 33 0.15
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 33 0.15
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 32 0.20
At2g20510.1 68415.m02395 mitochondrial import inner membrane tra... 31 0.35
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 31 0.61
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 31 0.61
At2g28620.1 68415.m03479 kinesin motor protein-related 31 0.61
At4g27595.1 68417.m03964 protein transport protein-related low s... 30 0.80
At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont... 30 0.80
At3g09550.1 68416.m01134 ankyrin repeat family protein contains ... 30 0.80
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 30 0.80
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 30 0.80
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 30 0.80
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 30 0.80
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 30 1.1
At2g48160.1 68415.m06031 PWWP domain-containing protein 30 1.1
At1g68790.1 68414.m07863 expressed protein 30 1.1
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 29 1.4
At3g50370.1 68416.m05508 expressed protein 29 1.4
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 1.4
At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 29 1.4
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 29 1.9
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 29 1.9
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 29 1.9
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 1.9
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 29 2.5
At3g58840.1 68416.m06558 expressed protein 28 3.2
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 28 3.2
At5g61920.1 68418.m07773 hypothetical protein 28 4.3
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 28 4.3
At5g40450.1 68418.m04905 expressed protein 28 4.3
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 4.3
At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 28 4.3
At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 28 4.3
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 28 4.3
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 28 4.3
At1g26650.1 68414.m03245 expressed protein 28 4.3
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 28 4.3
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 28 4.3
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 28 4.3
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 27 5.7
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 27 5.7
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 27 5.7
At3g50100.1 68416.m05477 exonuclease family protein contains exo... 27 5.7
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 7.5
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 7.5
At5g51370.1 68418.m06369 F-box family protein similar to unknown... 27 7.5
At5g33380.1 68418.m03963 hypothetical protein 27 7.5
At4g18880.1 68417.m02784 heat shock transcription factor 21 (HSF... 27 7.5
At3g56150.1 68416.m06241 eukaryotic translation initiation facto... 27 7.5
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 27 7.5
At2g35070.1 68415.m04302 expressed protein 27 7.5
At2g01680.1 68415.m00095 ankyrin repeat family protein contains ... 27 7.5
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 27 7.5
At1g12210.1 68414.m01413 disease resistance protein (CC-NBS-LRR ... 27 7.5
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 27 9.9
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 27 9.9
At1g33910.1 68414.m04203 avirulence-responsive family protein / ... 27 9.9
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 27 9.9
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 44.8 bits (101), Expect = 3e-05
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +3
Query: 129 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGS--ESVLQQLNAFAKSLQGALGD 302
K IE K KT E + ++ K+ + +D + + K G +S ++ L G +
Sbjct: 226 KAIEAKDKTAEKTGEYKDYTVEKATEGKDVTVS-KLGELKDSAVETAKRAMGFLSGKTEE 284
Query: 303 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 482
A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q++++ + +
Sbjct: 285 AKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESGA 344
Query: 483 SNVQETNEKLA 515
+ET + A
Sbjct: 345 QKAEETKDSAA 355
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 35.9 bits (79), Expect = 0.016
Identities = 22/76 (28%), Positives = 43/76 (56%)
Frame = +3
Query: 270 FAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTV 449
F+K ++G D+N + ++ +++ ++ AEEL+ D++ EKL Q
Sbjct: 51 FSKKIRGE-ADSNPEFQKTVKEFKER----AEELQGVKEDLKVRTKQTTEKLYKQGQGVW 105
Query: 450 QESQKLAKKVSSNVQE 497
E++ +AKKVSS+V++
Sbjct: 106 TEAESVAKKVSSSVKD 121
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 34.7 bits (76), Expect = 0.037
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 120 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGAL 296
D IE TK+ +KT EQ+FN + KSK + +D + +S +
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDI 106
Query: 297 GDANGKAKEALEQSRQNIERTAEEL 371
D + + + A++ + +E AE+L
Sbjct: 107 SDVSDEYRTAMKDFGKRLENLAEDL 131
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 34.3 bits (75), Expect = 0.049
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = +3
Query: 162 KTLEQQFNSLTKSKD-AQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEAL--- 329
+ ++ + + K+KD A D + KD +E ++N A + KAK+
Sbjct: 121 RAADKAYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADKAYETKEKAKDKAYDV 180
Query: 330 -EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 506
E+++ E T E++ + A ++EK + + T + + A + + +ET +
Sbjct: 181 KEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAADKAEETKD 240
Query: 507 K 509
K
Sbjct: 241 K 241
Score = 30.7 bits (66), Expect = 0.61
Identities = 28/118 (23%), Positives = 48/118 (40%)
Frame = +3
Query: 159 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQS 338
HKT E+ K K A D + KD +E ++N A + KAK+
Sbjct: 87 HKTKEE-----AKDK-AYDMKERTKDYAEQTKNKVNEGASRAADKAYETKEKAKDKAYDV 140
Query: 339 RQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 512
++ + AEE A V + A+ +K + ++ + +K +ET EK+
Sbjct: 141 KEKTKDYAEE---AKDKVNEGASRAADKAYETKEKAKDKAYDVKEKTKDFAEETKEKV 195
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 34.3 bits (75), Expect = 0.049
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = +3
Query: 162 KTLEQQFNSLTKSKD-AQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEAL--- 329
+ ++ + + K+KD A D + KD +E ++N A + KAK+
Sbjct: 85 RAADKAYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADKAYETKEKAKDKAYDV 144
Query: 330 -EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 506
E+++ E T E++ + A ++EK + + T + + A + + +ET +
Sbjct: 145 KEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAADKAEETKD 204
Query: 507 K 509
K
Sbjct: 205 K 205
Score = 30.7 bits (66), Expect = 0.61
Identities = 28/118 (23%), Positives = 48/118 (40%)
Frame = +3
Query: 159 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQS 338
HKT E+ K K A D + KD +E ++N A + KAK+
Sbjct: 51 HKTKEE-----AKDK-AYDMKERTKDYAEQTKNKVNEGASRAADKAYETKEKAKDKAYDV 104
Query: 339 RQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 512
++ + AEE A V + A+ +K + ++ + +K +ET EK+
Sbjct: 105 KEKTKDYAEE---AKDKVNEGASRAADKAYETKEKAKDKAYDVKEKTKDFAEETKEKV 159
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 34.3 bits (75), Expect = 0.049
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 QGALGDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 461
Q G A G ++ E+ R +TA+ + KAH + + QAA Q + +Q
Sbjct: 18 QEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQ 77
Query: 462 KLAKKVSSNVQETNEK 509
+K S Q +K
Sbjct: 78 SAKEKTSQTAQTAQQK 93
Score = 31.5 bits (68), Expect = 0.35
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +3
Query: 297 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAK 473
G+ GKA+E Q+ + AEE R K + E Q+A T Q +Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 474 KVSSNVQETNEK 509
K Q EK
Sbjct: 71 KAHETAQSAKEK 82
>At5g39420.1 68418.m04775 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 644
Score = 33.9 bits (74), Expect = 0.065
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +3
Query: 120 DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALG 299
D +++ H + + + ++ SL S DFS+ +D + L+ L +S+ G L
Sbjct: 555 DVIEEVPSHESKLSR-IGERHGSLDGS--GLDFSQREEDSPKKTLEHLQFGKQSISGPLI 611
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKN 401
+GK E L+++ NI + +RK+H E++
Sbjct: 612 FKSGKIDEILQRNESNIR---QAVRKSHLQREQD 642
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 276 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 449
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 450 QESQKLAKKVSSN-VQETNEK 509
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 276 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 449
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 704 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 763
Query: 450 QESQKLAKKVSSN-VQETNEK 509
E +LAK+ +N V T +K
Sbjct: 764 GEKVQLAKEEGANDVLSTPDK 784
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 276 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 449
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 450 QESQKLAKKVSSN-VQETNEK 509
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 276 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 449
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 450 QESQKLAKKVSSN-VQETNEK 509
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 33.9 bits (74), Expect = 0.065
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Frame = +3
Query: 129 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGS-ESVLQQLNAFAKSLQGALGDA 305
K E + K L + +TK + + + A K+ E+++ ++A Q AL +
Sbjct: 318 KSYEASIRHLQKDLSAAKSEVTKVESSMVEALAAKNSEIETLVSAMDALKN--QAALNEG 375
Query: 306 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ---AAVQNTVQESQKLAKK 476
+ +AL + ER AEE R AH + A +L+ + Q++A +
Sbjct: 376 KLSSLQALREELATTERRAEEERSAHNATKMAAMERERELEHRAVDASTALVRIQRIADE 435
Query: 477 VSSNVQETNEKLA 515
++ V + +K+A
Sbjct: 436 RTAKVADFEQKVA 448
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 32.7 bits (71), Expect = 0.15
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 204 DAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAH 383
D D K DG + L QLNA ++L+ + D K + E+ E+ +E +
Sbjct: 30 DGGDEPKLRSDGGDIELDQLNAKIRALESQIDDKT-KELKGREELVTEKEKLLQERQDKV 88
Query: 384 PDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 494
+E ++LR+K + + ++Q A ++ V+
Sbjct: 89 ASLETEVSSLRKKGSSDSVELLSKAQARATELEKQVE 125
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 32.7 bits (71), Expect = 0.15
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 204 DAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAH 383
D D K DG + L QLNA ++L+ + D K + E+ E+ +E +
Sbjct: 30 DGGDEPKLRSDGGDIELDQLNAKIRALESQIDDKT-KELKGREELVTEKEKLLQERQDKV 88
Query: 384 PDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 494
+E ++LR+K + + ++Q A ++ V+
Sbjct: 89 ASLETEVSSLRKKGSSDSVELLSKAQARATELEKQVE 125
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 32.3 bits (70), Expect = 0.20
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 321 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-QKLAKKVSSNV 491
EAL+ S Q + AE LRKA + E + L +L+ A + Q ES Q+L +K+S++
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056
Query: 492 QE 497
E
Sbjct: 1057 SE 1058
>At2g20510.1 68415.m02395 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 472
Score = 31.5 bits (68), Expect = 0.35
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +3
Query: 255 QQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 434
++ + F + + G+A+ + E++ + ++ EE + D++ EKL
Sbjct: 43 RRFSVFTEFSKNIRGEAHSNPE--FERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQ 100
Query: 435 VQNTVQESQKLAKKVSSNVQE 497
E++ AKKVSS+V++
Sbjct: 101 ADGVWTEAESAAKKVSSSVKD 121
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 30.7 bits (66), Expect = 0.61
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Frame = +3
Query: 171 EQQFNSLTKSK-DAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQN 347
E+Q +L + K D +D + + ++ ++ + KE Q N
Sbjct: 815 ERQVENLERQKTDLEDELDRLRVSEMEAVSKVTILEARVEEREKEIGSLIKETNAQRAHN 874
Query: 348 I---ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 473
+ E+ +E RKAH + A AL +LQAA + Q+LA+
Sbjct: 875 VKSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 919
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 30.7 bits (66), Expect = 0.61
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Frame = +3
Query: 99 MVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDA---QDFSKAWKDGSESVL-QQLN 266
+ R + + D+ H +E + + + + K Q+ + KD +S QQL
Sbjct: 234 IARLNGKSYMADLSHEIRENETAFQIKQQEILEMKGLYTRQEMLQMKKDMEKSFENQQLR 293
Query: 267 AFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL---QAAV 437
+ ++ L + KE LEQ + + EL K +VEK ++ + ++L QA
Sbjct: 294 QMMERVETELRET----KERLEQQLKEEKSARLELEKRAKEVEKRSSDVVKELNDEQAKR 349
Query: 438 QNTVQESQKLAKKVSSNVQETNEKLA 515
+ +++ K+ + V+ N++LA
Sbjct: 350 LESESRAKEAVKQSNGVVENLNKELA 375
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 120 DFFKDIEHHTKEFHKTLEQQFNSLTK-SKDAQD-----FSKAWKDGSESVLQQLNAFAKS 281
D K + +F KTL+ N LTK ++DAQ+ S K ES+ + +
Sbjct: 713 DSAKSVSTVMLDFFKTLDTHANKLTKLAEDAQNVNEQKLSAFTKKFEESIANEEKQMLEK 772
Query: 282 LQGALGDANGKAKEALEQSRQNIER 356
+ L +N + KE ++ + Q+I +
Sbjct: 773 VAELLASSNARKKELVQIAVQDIRQ 797
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 30.3 bits (65), Expect = 0.80
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 300 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 470
D K KE+L E QNI + AEELR D K E+L AA ++ V++ KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 471 KKVSSNVQETNE 506
S VQE E
Sbjct: 703 ----STVQEAEE 710
>At4g21020.1 68417.m03041 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to SP|P23283 Desiccation-related
protein {Craterostigma plantagineum}; contains Pfam
profile PF02987: Late embryogenesis abundant protein
Length = 266
Score = 30.3 bits (65), Expect = 0.80
Identities = 26/132 (19%), Positives = 57/132 (43%)
Frame = +3
Query: 111 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQG 290
+A D D + +K++ + + + K K + SKA E+ Q + ++ +
Sbjct: 54 NARDSRADSAYGSKKWREDTGEYYAQAAKDKANEGASKAADKAYETKEQAKDKAYETKE- 112
Query: 291 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 470
A A A E+++ ERT +++ + A +EK + ++T+ +++ A
Sbjct: 113 ---KAKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKA 169
Query: 471 KKVSSNVQETNE 506
+ V+E E
Sbjct: 170 RHAKEKVKEYGE 181
>At3g09550.1 68416.m01134 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 436
Score = 30.3 bits (65), Expect = 0.80
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +3
Query: 159 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQS 338
HKT LT S++ + + +LN L+ + + LEQ+
Sbjct: 177 HKTAYDIAEGLTHSEETAEIKEILSRCGALKANELNQPRDELRKTVTEIKKDVHTQLEQT 236
Query: 339 RQ---NIERTAEELRKAHPDVEKNAT 407
R+ N++ A+ELRK H NAT
Sbjct: 237 RKTNKNVDGIAKELRKLHRAGINNAT 262
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 30.3 bits (65), Expect = 0.80
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Frame = +3
Query: 174 QQFNSLTKSKDAQDFSKAWKDGSESVL-----QQLNAFAKSLQGALGDANGKAKEALEQS 338
+ N K + Q K+ + SES L QL + L+G +G + + + AL++
Sbjct: 310 ESVNEKLKQEFDQAQEKSLQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRL 369
Query: 339 RQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 506
+ IER ++ E ++ L EKL+ +N ++E +KLA + +S V +T +
Sbjct: 370 EEAIERFNQK--------ETESSDLVEKLKTH-ENQIEEYKKLAHE-ASGVADTRK 415
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +3
Query: 324 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETN 503
ALE ++ E + D+ K T+ EKLQ+ + + +E+ ++ S +E
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQ 535
Query: 504 EKLA 515
+A
Sbjct: 536 SVIA 539
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 30.3 bits (65), Expect = 0.80
Identities = 26/107 (24%), Positives = 45/107 (42%)
Frame = +3
Query: 153 EFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALE 332
E +T + + +K KDA++ + ++ + AKSL + KAKE E
Sbjct: 524 EIDRTRSEIASVQSKEKDAREKMVELPKQLQQAAEEADE-AKSLAEVAREELRKAKEEAE 582
Query: 333 QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 473
Q++ L A ++E A E+L A ++ES+ K
Sbjct: 583 QAKAGASTMESRLFAAQKEIE--AAKASERLALAAIKALEESESTLK 627
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 30.3 bits (65), Expect = 0.80
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +3
Query: 234 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 413
D ESV + + +S+ DA K +E ++ + + KAH E+ +
Sbjct: 214 DAKESVADKAHDAKESVAQKAHDAKEKVREKAHDVKETVAQ------KAHESKERAKDRV 267
Query: 414 REKLQAAVQNTVQESQKLAKKVSSNVQE 497
REK Q + +S+ ++V + +E
Sbjct: 268 REKAQELKETATHKSKNAWERVKNGARE 295
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 30.3 bits (65), Expect = 0.80
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 330 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN---TVQESQKLAKKVSSNVQET 500
E+ + + R AEE + +++ A R KL+ V N TV + +KLAKK+S +E
Sbjct: 557 EEEIEEMIREAEEFAEEDKIMKEKIDA-RNKLETYVYNMKSTVADKEKLAKKISDEDKEK 615
Query: 501 NE 506
E
Sbjct: 616 ME 617
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 336 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 488
S N+ RT ++ HP+ + + +RE + + ++E+ +L + V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 2 PVRISSALSLSTVHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 160
P+R++ LS ST+H+ G + S ++L S P++DG+ + R H PH P
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 29.9 bits (64), Expect = 1.1
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = +3
Query: 138 EHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKDGSESVLQ-QLNAFAKSLQGALGDANG 311
E EF + L E++ + K D Q KA D + +L +SL L G
Sbjct: 331 EKELHEFEENLIEREQMEIGKLLDDQ---KAVLDSRRREFEMELEQMRRSLDEEL---EG 384
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQNTVQESQKLAKKVS 482
K E +EQ + I E+L K +EK +++K L A ++ TV+E +K K
Sbjct: 385 KKAE-IEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLK-TVKEKEKALKAEE 442
Query: 483 SNVQETNEKL 512
+ NE+L
Sbjct: 443 KKLHMENERL 452
>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 723
Score = 29.5 bits (63), Expect = 1.4
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Frame = +3
Query: 246 SVLQQLNAFAKSLQGALGDANGKAKEALEQS------RQN-IERTAEELRKAHPDVEKNA 404
+V LN L+G L ++KE LEQ+ R N ++ EELR+ ++E
Sbjct: 423 AVKDYLNKKVNDLEGELETTKQRSKENLEQAIMSERERFNQMQWDMEELRQKSYEMEMKL 482
Query: 405 TALRE---KLQAAVQNTVQESQKLAKKVSSNVQETNE 506
+ + + VQ+T+ E L+K++ + Q+ +
Sbjct: 483 KSREDGSSHAEPTVQSTISEKHVLSKELDARKQQLED 519
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 330 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESQKLAKK 476
EQ R R AEELRK+ + EK+ + E + QAA Q ++ +K++++
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580
>At3g22790.1 68416.m02873 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 29.5 bits (63), Expect = 1.4
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +3
Query: 174 QQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQ----SR 341
Q NS K K + + K G E Q+LN+ + LQ +L +AN + + LE
Sbjct: 1103 QNINSGLKQK-VETLEEILK-GKEVDSQELNSKLEKLQESLEEAN-ELNDLLEHQILVKE 1159
Query: 342 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 512
+ + + A EL +A ++ A E +A + +++ K ++K+ N+++ N +L
Sbjct: 1160 ETLRQKAIELLEAEEMLKATHNANAELCEAVEE--LRKDCKESRKLKGNLEKRNSEL 1214
>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 178
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 282 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 461
L G++ ++ +KE E SR + R ++EK +RE++QA + +E++
Sbjct: 28 LSGSMSFSSQMSKEDEEMSRTALSA----FRAKEEEIEKKKMEIRERVQAQLGRVEEETK 83
Query: 462 KLA 470
+LA
Sbjct: 84 RLA 86
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 491
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 492 QETNEKL 512
+ E L
Sbjct: 246 EFNQEPL 252
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 491
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 492 QETNEKL 512
+ E L
Sbjct: 246 EFNQEPL 252
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 29.1 bits (62), Expect = 1.9
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 255 QQLNAFAKSLQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 431
QQL+ KSL+ + D A+E LEQ + +EE K + VEK A + L
Sbjct: 214 QQLDKQRKSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEK-AQDDSKSLDE 272
Query: 432 AVQNTVQESQKLAK-KVSSNVQET 500
+++ +E Q L K K + Q+T
Sbjct: 273 SLKELTKELQTLYKEKETVEAQQT 296
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/67 (22%), Positives = 37/67 (55%)
Frame = +3
Query: 315 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 494
AKE +E+ R +E + + + + N TAL++ +++A +N E++K + + + +
Sbjct: 970 AKEEIEKLRGEVESSKSHMLQYKSIAQVNETALKQ-MESAHENFRLEAEKRQRSLEAELV 1028
Query: 495 ETNEKLA 515
E+++
Sbjct: 1029 SLRERVS 1035
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/96 (17%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +3
Query: 231 KDGSESVLQQLNAFA-KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNAT 407
KD S + +L A + + A+G +GK +E +++ + + E++ +A + +
Sbjct: 285 KDAGVSKIGELKDSAVDTAKRAMGFLSGKTEETKQKAVETKDTAKEKMDEAGEEARRKME 344
Query: 408 ALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLA 515
+R + + ++ +++Q+ + + ET + +A
Sbjct: 345 EMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVA 380
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE----KLQAAVQNTVQESQKLAKKV 479
KAKE +++R+ ++TAE++ + + AT ++ K+ + V +++ +
Sbjct: 251 KAKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFL 310
Query: 480 SSNVQETNEK 509
S +ET +K
Sbjct: 311 SGKTEETKQK 320
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 485
KA + + + E+ AE LRK +VEK L K+ V+E ++ +KK+ S
Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVL---EVREMEEKSKKLRS 182
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 273 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 452
AKSL A + KAKE ++++ + +L ++ ++E A+ EKL A +Q
Sbjct: 512 AKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEME--ASRASEKLALAAIKALQ 569
Query: 453 ESQ 461
E++
Sbjct: 570 ETE 572
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 321 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ--AAVQNTVQESQKLAKKVSSNVQ 494
E+LE S Q +ER EE ++ + E+ + EKL ++ + + K +K+ S +
Sbjct: 170 ESLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIS 229
Query: 495 ETNEK 509
K
Sbjct: 230 TARNK 234
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 27.9 bits (59), Expect = 4.3
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Frame = +3
Query: 165 TLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSR- 341
TLE Q + L K +DAQ K S+ +L ++ K K+ EQ R
Sbjct: 636 TLETQVSVLKKKQDAQAQLMRQKQKSDDAAIKLQDEIHRIKSQKVQLQQKIKQESEQFRA 695
Query: 342 ------QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 479
+ + + +E R+ ++ K AL +K + +Q +E+ ++ K++
Sbjct: 696 WKASREKEVMQLKKEGRRNEYEMHK-LMALNQKQKLVLQRKTEEASQVTKRL 746
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 479
D+NG E ++Q NI EE+ A P + ++ + + +++ + S++ +K V
Sbjct: 824 DSNGAEAEQIDQ---NITNETEEILVAKPVSLLDVKSVEQMQKPKLESPSEVSEETSKTV 880
Query: 480 SSNVQETNEK 509
++E E+
Sbjct: 881 DEKIEEKPEE 890
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 378 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 274
P PRPC+R + P + RALPG W
Sbjct: 61 PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95
>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 192
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 309 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 470
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 195
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 309 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 470
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +3
Query: 261 LNAFAKSLQGALGDANGKAKEALEQ---SRQNIERTAEELRKAHPDVEK----NATALRE 419
L A L+ + + K K+ L++ + I++ E + + D+E+ N++A+ E
Sbjct: 725 LEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSAVSE 784
Query: 420 KLQAAVQNTVQESQKLAKKVS 482
+L A QN+ E+ K ++K S
Sbjct: 785 QLPIARQNSAFENDKFSEKRS 805
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 168 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQN 347
L+ + + K++D+ + + + +E+ +LN SLQ + DA G +E + S Q+
Sbjct: 2227 LKSEVPNEKKNRDSDERHDSHGNSTETEADELNQNNSSLQ-QVTDAAGNGQEQAQVSSQS 2285
Query: 348 IERTAEELRKAHPD---VEKNATALREKLQ 428
+A P +E + T L E +Q
Sbjct: 2286 AGERGSSQTQAMPQDMRIEGDETILPEPIQ 2315
>At1g26650.1 68414.m03245 expressed protein
Length = 335
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -2
Query: 299 SERSLETLGEGVELLQHGLGAVLPSLAEVLC 207
S +LE L E V +L++ LGA++ + A ++C
Sbjct: 24 SSNALEILRETVRILRYNLGALMLTTAVLIC 54
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 351 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 512
E+ A D+EK + +++K + VQ VQE ++ ++ + + +KL
Sbjct: 1111 EKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKMELLNMYADKKQKL 1164
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 351 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 512
E+ A D+EK + +++K + VQ VQE ++ ++ + + +KL
Sbjct: 1111 EKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKMELLNMYADKKQKL 1164
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 267 AFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 446
+ +K L+ L + + L+ ++ER + + +VEKN EK + Q
Sbjct: 416 SLSKKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNFAEALEKEKLKCQME 475
Query: 447 VQES-QKLAKKVSSN 488
ES +KL +K+ SN
Sbjct: 476 YMESVKKLEEKLISN 490
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 479
D + K KE E+ R+ +ER E R+ +E+ REK++ + ++ KL K+
Sbjct: 137 DRHEKQKER-EREREKLEREKEREREK---IEREKEREREKMEREIFEREKDRLKLEKER 192
Query: 480 SSNVQETNEKL 512
+ EK+
Sbjct: 193 EIEREREREKI 203
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/90 (33%), Positives = 47/90 (52%)
Frame = +3
Query: 243 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 422
ESV QL A ++ + A D+ GK KEA + EEL KA D++ TA ++
Sbjct: 136 ESVQVQL-AREQTEKLAANDSLGKEKEARLSVEKAQAGLTEELGKAQGDLQ---TA-NQR 190
Query: 423 LQAAVQNTVQESQKLAKKVSSNVQETNEKL 512
+Q +V + KL ++ +S++Q N KL
Sbjct: 191 IQ-----SVNDMYKLLQEYNSSLQLYNSKL 215
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 351 RCSASTVPKPPWPCRSRLRALPGDSW 274
RC+ + P PP PC+S ++ P W
Sbjct: 229 RCNLVSSPDPPMPCKSDNQSCPYYYW 254
>At3g50100.1 68416.m05477 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 406
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 QQLNAFAKSLQGA-LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 422
Q L+ K LQ L NG KE L +N + ++ R++H D+ + T ++K
Sbjct: 11 QVLDELVKLLQSRDLRGENGNWKEFLHVYDKNADSPSDPSRRSHEDLVQFLTTFKKK 67
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 317 GLAVRVSERSLETLGEGVELLQHGLGAVLP 228
G+ +R + E +G V+ +HG G+VLP
Sbjct: 396 GVIIRKEDVKQEKMGNAVKDSKHGFGSVLP 425
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 317 GLAVRVSERSLETLGEGVELLQHGLGAVLP 228
G+ +R + E +G V+ +HG G+VLP
Sbjct: 396 GVIIRKEDVKQEKMGNAVKDSKHGFGSVLP 425
>At5g51370.1 68418.m06369 F-box family protein similar to unknown
protein (emb|CAB82288.1) ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 355
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 262 SCCSTDSEPSFQALLKSCASFDLVSELNCC 173
SC D+ P + LL+SC + + + CC
Sbjct: 286 SCRKIDASPGPEKLLRSCPAMESLQLKRCC 315
>At5g33380.1 68418.m03963 hypothetical protein
Length = 154
Score = 27.1 bits (57), Expect = 7.5
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +3
Query: 234 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 413
DGS+S + L KS +G+A G + + + + ++ EEL A + EK A
Sbjct: 18 DGSQSDTKPLLQRRKSHPPTIGEAGGSSWQDAPEPQVLLKVKIEELYFAPEETEKLLQAA 77
Query: 414 REKLQAAVQNTVQESQKLAKK 476
A Q T Q K AKK
Sbjct: 78 HVLEIARAQKTKQ--TKKAKK 96
>At4g18880.1 68417.m02784 heat shock transcription factor 21 (HSF21)
identical to heat shock transcription factor 21
[Arabidopsis thaliana] GI:3399765; contains Pfam
profile: PF00447 HSF-type DNA-binding domain
Length = 401
Score = 27.1 bits (57), Expect = 7.5
Identities = 32/130 (24%), Positives = 54/130 (41%)
Frame = +3
Query: 120 DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALG 299
DF + H K H+ +SL + AQ + + Q+ K +G L
Sbjct: 90 DFVRGQPHLMKNIHRRKPVHSHSLPNLQ-AQ-LNPLTDSERVRMNNQIERLTKEKEGLLE 147
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 479
+ + + +E R+ E +EL++ +EK R+K + + V E LA +
Sbjct: 148 ELHKQDEE-----REVFEMQVKELKERLQHMEK-----RQKTMVSFVSQVLEKPGLALNL 197
Query: 480 SSNVQETNEK 509
S V ETNE+
Sbjct: 198 SPCVPETNER 207
>At3g56150.1 68416.m06241 eukaryotic translation initiation factor 3
subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly
identical to SP|O49160 Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105)
{Arabidopsis thaliana}
Length = 900
Score = 27.1 bits (57), Expect = 7.5
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +3
Query: 96 AMVRRDAPDFFKD---IEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA---WKDGSESVLQ 257
A + R +FFK I+ HT+E+ + L + L +++ QD+ + +K ++ L+
Sbjct: 358 AFLERVDTEFFKSLQCIDPHTREYVERLRDEPMFLALAQNIQDYFERMGDFKAAAKVALR 417
Query: 258 QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAE 365
++ A Q + DA K E +E+ + E E
Sbjct: 418 RVEAIYYKPQ-EVYDAMRKLAELVEEEEETEEAKEE 452
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +3
Query: 315 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 494
AKEA E + E + DVE A +L K++ ++++ ++ + L+ K +S
Sbjct: 486 AKEAAEDGLKAANGKTEAIESRLKDVEAEAESLILKIK-SLEDVTEKERALSAKHNSKCN 544
Query: 495 ETNEKLA 515
E ++++
Sbjct: 545 ELQDEIS 551
>At2g35070.1 68415.m04302 expressed protein
Length = 158
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 QLNAFAKSLQGALGDANGKAKEALEQSRQ-NIERTAEELRKAHPDVEK 398
Q A ++ GK K + +S + R AEE RK D+EK
Sbjct: 46 QAEALTGAITSGFESVMGKVKADIAKSEEYKSTRVAEEFRKMRADIEK 93
>At2g01680.1 68415.m00095 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 532
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 273 AKSLQGALGDANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNAT 407
A++L+ A+ D + + L E++ + + A+ELRK H + +N T
Sbjct: 304 ARALKRAVSDIKHEVQSQLLQNEKTNRRVSGIAKELRKLHREAVQNTT 351
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 27.1 bits (57), Expect = 7.5
Identities = 28/102 (27%), Positives = 49/102 (48%)
Frame = +3
Query: 129 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDAN 308
KD E + ++ + + S T S + + + KD +++ ++L+A AL AN
Sbjct: 25 KDSEIQPESTMESRDDEIQSPTVSLEVETEKEELKDSMKTLAEKLSA-------AL--AN 75
Query: 309 GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 434
AK+ L +Q++ + AEE E L+EKL+AA
Sbjct: 76 VSAKDDLV--KQHV-KVAEEAVAGWEKAENEVVELKEKLEAA 114
>At1g12210.1 68414.m01413 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 885
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 186 SLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAE 365
SL+ ++ FS+ W S S +Q L+ SLQ A+G N K + Q R N E
Sbjct: 8 SLSCDREVNQFSQ-WLCVSGSYIQNLSENLASLQKAMGVLNAKRDDV--QGRINREEFTG 64
Query: 366 ELRK 377
R+
Sbjct: 65 HRRR 68
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 342 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 497
+ +R A+ R+ + NA +R+K QA ++ ++ KK+SS + +
Sbjct: 345 EEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQ 396
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 243 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 422
E + + A+ L AL AN AK+ L +Q++ + AEE E L+EK
Sbjct: 22 EELKDSMKTLAEKLSAAL--ANVSAKDDLV--KQHV-KVAEEAVAGWEKAENEVVELKEK 76
Query: 423 LQAA 434
L+AA
Sbjct: 77 LEAA 80
>At1g33910.1 68414.m04203 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 301
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/77 (19%), Positives = 35/77 (45%)
Frame = +3
Query: 168 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQN 347
+EQ+ +K + + + K S QQ+N A+ ++ L +++ + L +
Sbjct: 221 MEQEMEVQSKKPENTEVEEMKKQLEISYGQQMNMMAQMVEDTLKESSASHERMLLALKDK 280
Query: 348 IERTAEELRKAHPDVEK 398
+ER+ E H + ++
Sbjct: 281 VERSYLENEDMHNETKR 297
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/85 (23%), Positives = 42/85 (49%)
Frame = +3
Query: 237 GSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALR 416
G +V ++ K L+ LG + KE E++++ R EE+R+ + EK L+
Sbjct: 155 GLRTVKEENEKRMKELESKLGAL--EVKELDEKNKKF--RAEEEMREKIDNKEKEVHDLK 210
Query: 417 EKLQAAVQNTVQESQKLAKKVSSNV 491
EK+++ + + +L K ++ +
Sbjct: 211 EKIKSLESDVAKGKTELQKWITEKM 235
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,732,965
Number of Sequences: 28952
Number of extensions: 152325
Number of successful extensions: 901
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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