Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30307
(502 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 106 9e-24
SB_30841| Best HMM Match : HLH (HMM E-Value=1.5) 45 4e-05
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.033
SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033) 35 0.043
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 31 0.53
SB_57157| Best HMM Match : Seryl_tRNA_N (HMM E-Value=1.2) 30 1.2
SB_41264| Best HMM Match : TIL_assoc (HMM E-Value=0.87) 30 1.2
SB_29026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_2793| Best HMM Match : UBX (HMM E-Value=0.32) 29 2.2
SB_38767| Best HMM Match : Filamin (HMM E-Value=0.034) 29 2.8
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_21673| Best HMM Match : Troponin (HMM E-Value=0.34) 28 3.8
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 28 3.8
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44) 28 5.0
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 28 5.0
SB_55529| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_51209| Best HMM Match : UBX (HMM E-Value=0.5) 27 6.6
SB_46364| Best HMM Match : DUF22 (HMM E-Value=3.1) 27 6.6
SB_34357| Best HMM Match : UBX (HMM E-Value=0.28) 27 6.6
SB_43472| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 27 6.6
SB_23681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_17814| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_5006| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 27 8.7
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 27 8.7
SB_41935| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 106 bits (255), Expect = 9e-24
Identities = 59/165 (35%), Positives = 84/165 (50%)
Frame = +3
Query: 3 KEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAE 182
++EE + RKNHQR LD++Q R++KK E D NE+EI L+++ KAN E
Sbjct: 1615 RDEEIDTLRKNHQRQLDALQASLDSEVKSKNEHARLRKKFETDCNEMEINLENSMKANQE 1674
Query: 183 AQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEESRTLLEQADRA 362
QK K+ Q Q+KDLQ + +ERR+ L ELE+ R LEQADRA
Sbjct: 1675 LQKTTKKLQQQVKDLQLMVEEEQRGRDDARESAARAERRSAELAAELEDLRNQLEQADRA 1734
Query: 363 RRQAEQELSDAHEXXXXXXXXXXXXXXXXXXXXXELQTLHSDLDE 497
RR A+QE +DA + ++ T+ +LD+
Sbjct: 1735 RRTADQERADAVDRLAEVSNQVNNLQQGKRKLEGQVNTMQEELDD 1779
Score = 43.2 bits (97), Expect = 1e-04
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Frame = +3
Query: 114 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISE 293
KKLE + ELE LD+ K +AE+QK K+ + ++K++Q L ++
Sbjct: 1849 KKLEQRVKELERELDNEAKRSAESQKLAKKNERRMKEIQ-------FQADEDQKNLARAQ 1901
Query: 294 RRANALQNELEESRTLLEQADR------AR-RQAEQELSDAHE 401
++ + N+L++ RT +E+A+ AR R+A+ EL +A E
Sbjct: 1902 ENSDRMNNKLKKMRTAVEEAEALAAANLARFRKAQTELEEAEE 1944
Score = 31.9 bits (69), Expect = 0.31
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 105 RMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTAL 239
R K L +++N+L L K+ E +K KR + + ++LQTAL
Sbjct: 1536 RENKSLASEVNDLADQLGEGGKSVVELEKLRKRLEMEKEELQTAL 1580
Score = 30.7 bits (66), Expect = 0.71
Identities = 22/92 (23%), Positives = 40/92 (43%)
Frame = +3
Query: 111 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 290
K+KL A + E+E AL+ A A A+K R ++++D L
Sbjct: 1426 KRKLAAKLQEMEEALNTAQTKAASAEKTRSRLNSELEDALIDLEKAQTNNANLEKKQKKI 1485
Query: 291 ERRANALQNELEESRTLLEQADRARRQAEQEL 386
+ + N + +LEE + L+ + + R E+
Sbjct: 1486 DIQINEWRVKLEEVQADLDNSQKEARNYSTEM 1517
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/93 (18%), Positives = 37/93 (39%)
Frame = +3
Query: 105 RMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLG 284
+ +KK++ INE + L+ +QK + Y ++ ++ A
Sbjct: 1480 KKQKKIDIQINEWRVKLEEVQADLDNSQKEARNYSTEMYKIKAAFDEQSEQVEALKRENK 1539
Query: 285 ISERRANALQNELEESRTLLEQADRARRQAEQE 383
N L ++L E + + ++ R++ E E
Sbjct: 1540 SLASEVNDLADQLGEGGKSVVELEKLRKRLEME 1572
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/97 (20%), Positives = 38/97 (39%)
Frame = +3
Query: 111 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 290
K L D + A A + NAE + +AQ+KD+ L
Sbjct: 875 KNLLFQDFQREQDACADAEERNAELEGRKADLEAQVKDMLEQLEDEEEASAELSSVKHKL 934
Query: 291 ERRANALQNELEESRTLLEQADRARRQAEQELSDAHE 401
E + L+ ++EE L++ + +Q ++ + +E
Sbjct: 935 EGEISDLKQDIEELDATLKKVEEEGKQKDKNIEQLNE 971
>SB_30841| Best HMM Match : HLH (HMM E-Value=1.5)
Length = 189
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +3
Query: 288 SERRANALQNELEESRTLLEQADRARRQAEQELSDAHEXXXXXXXXXXXXXXXXXXXXXE 467
+ERR+ L ELE+ R LEQADRARR A+QE +DA + +
Sbjct: 14 AERRSAELAAELEDLRNQLEQADRARRTADQERADAVDRLAEVSNQVNNLQQGKRKLEGQ 73
Query: 468 LQTLHSDLDE 497
+ T+ +LD+
Sbjct: 74 VNTMQEELDD 83
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Frame = +3
Query: 3 KEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMKKKLEADINELEIALDHAN---KA 173
K E E RK Q L+ + + K+ LE + E++ ++ +
Sbjct: 1396 KLAESERLRKLAQTELEGVMESKDDFGKNVHELEKAKRSLEQQLAEMKQTMEELEDELQV 1455
Query: 174 NAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEESRTLLEQA 353
+ + +K+YQ Q+KD+Q L +E + L+ + + + L A
Sbjct: 1456 KEDGLRQLKKYQQQLKDIQRDLDDARASRDEIAEHAKENEHKLKQLEADFIQMQEDLSAA 1515
Query: 354 DRARRQAEQELSDAHE 401
+R+R+ E+E + E
Sbjct: 1516 ERSRKVLERERDELAE 1531
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 111 KKKLEADINELEIAL-DHANKANAEAQKNIKRYQAQIKDLQTAL 239
KK LE +NEL+ AL D K+ A++ K+ A I DL+ L
Sbjct: 1032 KKTLEEKLNELDQALIDEEEKSKGLAKQKAKQ-DAMIADLEERL 1074
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 35.1 bits (77), Expect = 0.033
Identities = 23/96 (23%), Positives = 42/96 (43%)
Frame = +3
Query: 105 RMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLG 284
+M++K +A I+++E L+ K + N+K QAQ K L+ L L
Sbjct: 312 KMRQKSKASIHDIENILNDKEKNLTDVMNNLKEEQAQRKQLEKQLVDSSKKFEKENQILM 371
Query: 285 ISERRANALQNELEESRTLLEQADRARRQAEQELSD 392
++ L+ E S+ +E+ + +EL D
Sbjct: 372 EADELIKTLKLEKSSSKQQIEEQKNVCLKTIRELED 407
>SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033)
Length = 311
Score = 34.7 bits (76), Expect = 0.043
Identities = 21/93 (22%), Positives = 39/93 (41%)
Frame = +3
Query: 105 RMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLG 284
RMK+ LE D+ E E +DH E + I + +++ L+ + +
Sbjct: 206 RMKEDLEEDLQEKENQMDHWKVLEEELRNGINEREKELEMLRCSTEEDQEKLISLNTEME 265
Query: 285 ISERRANALQNELEESRTLLEQADRARRQAEQE 383
+ A + +E T ++A+ R QA +E
Sbjct: 266 SLNKSLRAATEKQKELETTAKKAEEEREQARRE 298
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 33.1 bits (72), Expect = 0.13
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 153 LDHANKANAEAQKNIKRYQAQIKDLQTA---LXXXXXXXXXXXXXLGISERRANALQNEL 323
L H K + Q+++K+ AQ+ DL+ L L +S + EL
Sbjct: 1077 LAHYEKVARQQQEDLKKRIAQLTDLEVEAEKLRKRKQDSEETAQELRLSREQLQNTHAEL 1136
Query: 324 EESRTLLEQADRARRQAEQELSDAH 398
E+R L + R ++ QEL DAH
Sbjct: 1137 MEARRELLRYQRKEQELVQELDDAH 1161
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 32.3 bits (70), Expect = 0.23
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +3
Query: 108 MKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGI 287
++ KL+ +N E D + E ++ IK ++KD+++ L +
Sbjct: 547 LQAKLDDALNSREAKSDWDSNRIYELEEKIKDLSKKLKDVESDLAERDRQIQNLSLEK-V 605
Query: 288 SERRANA---LQNELEESRTLLEQADRARRQAEQEL 386
+E R + L+NELEE R ++++ + ++ E+E+
Sbjct: 606 NESRDDEITELENELEEQREIIKENEEKLKEKEKEI 641
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 31.5 bits (68), Expect = 0.40
Identities = 26/95 (27%), Positives = 41/95 (43%)
Frame = +3
Query: 108 MKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGI 287
+KK +EA + E NK + + +K Y+ ++K+ +T
Sbjct: 2527 IKKAVEAKLEAAEDRSSRQNKESVALRTQLKSYKRRLKEYET------------------ 2568
Query: 288 SERRANALQNELEESRTLLEQADRARRQAEQELSD 392
SE R L+ E + R LLEQ R+ +ELSD
Sbjct: 2569 SESRIPKLRTEFDRERELLEQQINNYRRQIEELSD 2603
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 31.1 bits (67), Expect = 0.53
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +3
Query: 129 DINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANA 308
D+N L+ AL A + Q+ +K Q + LQ L ++
Sbjct: 318 DLNNLQTALSAATDNRRQVQEQLKEKQQLVISLQHDLNQVSSKEA--------ESQQVRN 369
Query: 309 LQNELEESRTLLEQADRARRQAEQELSDAHE 401
LQN+LEE++ LE ++ + E L + E
Sbjct: 370 LQNQLEETKRQLENREKTVLELESGLKEKKE 400
>SB_57157| Best HMM Match : Seryl_tRNA_N (HMM E-Value=1.2)
Length = 334
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 309 LQNELEESRTLLEQADRARRQAEQELSDAH 398
+Q E E R + A+R R+ + ELS+AH
Sbjct: 204 IQEEYETQRAIANSAERINRRLKDELSEAH 233
>SB_41264| Best HMM Match : TIL_assoc (HMM E-Value=0.87)
Length = 770
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 232 PLSRRSSAPVTMPANSSASRSVAPMLFRTNWKSPAHS 342
PL S +PVT S A +S L R NW S H+
Sbjct: 308 PLMGTSGSPVTNDGTSRADKSFPTELSRHNWPSIGHA 344
>SB_29026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +3
Query: 279 LGISERRANALQNELE---ESRTLLEQADRARRQAEQELSDAHE 401
+G SE R + +LE ES + ++ DR R + EQEL+ A E
Sbjct: 221 IGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQELTXAEE 264
>SB_2793| Best HMM Match : UBX (HMM E-Value=0.32)
Length = 311
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 291 ERRANALQN--ELEESRTLLEQADRARRQAEQELSDAHE 401
ER+AN + +LEES + ++ DR R + EQEL+ E
Sbjct: 63 ERKANFKEQLEQLEESSKIDKEKDRLRLEEEQELTKQEE 101
>SB_38767| Best HMM Match : Filamin (HMM E-Value=0.034)
Length = 265
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 353 RPRPSPGRAGTQRRPRATQRALRTERFPLCRQEETRVRAANPALRPR 493
R RP G+AG R + T R PL + TRV+A NP R +
Sbjct: 91 RWRPKHGKAGFSSRKH---QQTPTSRLPLITGDYTRVQAQNPLGRQK 134
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = +3
Query: 114 KKLEADINELEIALDHANKA--NAEA--QKNIKRYQAQIKDLQTALXXXXXXXXXXXXXL 281
++L ++ + +A A +A NA A +K ++ + ++++L+
Sbjct: 246 ERLHQELQNILLAEKEAREAETNARALQEKLLEEEKKRLEELERLKEEKDKMLEEELKKR 305
Query: 282 GISERRANALQNELEESRTLLEQADRARRQAEQELSDAHE 401
E + LEE R LE ++ R+ A+Q + +AH+
Sbjct: 306 ETLEEKQKLQDKILEEERKRLENLEKERQAAQQAMQEAHD 345
>SB_21673| Best HMM Match : Troponin (HMM E-Value=0.34)
Length = 337
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 108 MKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQT 233
++++ IN+ I L A + NA + I R ++Q+K +T
Sbjct: 274 LRREFSRQINDFRIKLQKAEQENARQEGVIMRLESQVKRYKT 315
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/87 (18%), Positives = 35/87 (40%)
Frame = +3
Query: 141 LEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNE 320
+E+ D + AEAQ+ + Y+A + D + ++ + L+ E
Sbjct: 1073 MEMQRDELERRYAEAQQALMDYKANVGDAEQTKKECQNKVMDAQHERNFAQAQYKKLEAE 1132
Query: 321 LEESRTLLEQADRARRQAEQELSDAHE 401
E + L + R E ++++ H+
Sbjct: 1133 YAELQRALAAVTQDRNSLESKIAELHD 1159
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/85 (23%), Positives = 32/85 (37%)
Frame = +3
Query: 138 ELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQN 317
ELE ALD ANK R + LQ L L + LQ
Sbjct: 814 ELEKALDEANKELKPLSDKYDRASRDLDILQKTLDDTQSRLANAEMTLDAETSKKKQLQE 873
Query: 318 ELEESRTLLEQADRARRQAEQELSD 392
+L+++ L + D + +++L +
Sbjct: 874 DLDDAMEDLHEKDTELNKTKRKLQE 898
>SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44)
Length = 534
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 120 LEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTA 236
L +I L + L N +++++ + + IKDLQTA
Sbjct: 262 LREEIARLRVKLSRTGMTNGPSREDVTQMEELIKDLQTA 300
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/91 (21%), Positives = 37/91 (40%)
Frame = +3
Query: 111 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 290
+++LEA+I EL ++ ++Q + + Q Q+K+L++
Sbjct: 1692 EERLEAEIAELANTVETLRTELEQSQVRLSKLQTQVKELKSEKKELQRKVDELTSEAQRR 1751
Query: 291 ERRANALQNELEESRTLLEQADRARRQAEQE 383
+ E E + L Q A+ AEQE
Sbjct: 1752 RNLSFEADKECEMLKEELHQLKNAQSMAEQE 1782
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +3
Query: 105 RMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLG 284
R K++L + ++L++ D +A+ Q + RY+ IKDL+ L
Sbjct: 1706 REKEQLCNERDDLQVKYDKLYQAD---QVDDARYEDTIKDLKNKLQRQVFLLEEKQMEFS 1762
Query: 285 ISERRANALQNELEESRTLLEQA 353
+R+ L ELEE+ L + A
Sbjct: 1763 AKQRKLERLGVELEEALELEKDA 1785
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 114 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQT 233
K+ E +I ELE+ + + NA Q+N+ QI+ +T
Sbjct: 511 KQYEENITELEMKVSRLSTENARFQENLSASTKQIEHWKT 550
>SB_55529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 284 HLGASRQCSSERTGRVPHTLGAGRPRPSPGRAGTQRRPRATQRALRT 424
H +R C E+ VP+ R R + G G Q R +Q+A+ +
Sbjct: 12 HFPDARVCPREKLNSVPNNQRGPRGRIATGNIGKQIDSRYSQKAINS 58
>SB_51209| Best HMM Match : UBX (HMM E-Value=0.5)
Length = 272
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 279 LGISERRANALQNEL---EESRTLLEQADRARRQAEQELSDAHE 401
+G SE R + +L EES + ++ DR R + EQEL+ E
Sbjct: 38 IGTSEERKAIFKEQLKQLEESSRIDKEKDRLRLEEEQELTKQEE 81
>SB_46364| Best HMM Match : DUF22 (HMM E-Value=3.1)
Length = 205
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 279 LGISERRANALQNELE---ESRTLLEQADRARRQAEQELSDAHE 401
+G SE R + +LE ES + ++ DR R + EQEL+ E
Sbjct: 35 IGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQELTKQEE 78
>SB_34357| Best HMM Match : UBX (HMM E-Value=0.28)
Length = 219
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 279 LGISERRANALQNE---LEESRTLLEQADRARRQAEQELSDAHE 401
+G SE R + + LEES + ++ DR R + EQEL+ E
Sbjct: 38 IGTSEERKAIFKEQREQLEESSRIDKEKDRLRLEEEQELTKQEE 81
>SB_43472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 279 LGISERRANALQNE---LEESRTLLEQADRARRQAEQELSDAHE 401
+G SE R + + LEES + ++ DR R + EQEL+ E
Sbjct: 58 IGTSEERKAIFKEQREQLEESSRIDKEKDRLRLEEEQELTKQEE 101
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 27.5 bits (58), Expect = 6.6
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = +3
Query: 120 LEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERR 299
LEA+ LE+ LD + +A+ ++R QA+ TAL +E +
Sbjct: 1008 LEANKRHLEVELDRKTQQVRQAESTLQRRQAE----HTALVVSKDTAQQQADE---AEAK 1060
Query: 300 ANALQNELEESRTLLEQADRARRQAEQELSDAH 398
AL+ E E LE+ + A ++L + H
Sbjct: 1061 LAALRKEYENVIGELEKTQADLKTASEQLMEMH 1093
>SB_23681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 279 LGISERRANALQNELE---ESRTLLEQADRARRQAEQELSDAHE 401
+G SE R + +LE ES + ++ DR R + EQEL+ E
Sbjct: 96 IGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQELTKQEE 139
>SB_17814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 111 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTAL 239
+K L + ELE LD K A A K+ + ++DL+ L
Sbjct: 35 RKALLKQLRELESELDEERKLRASAVNARKKQELDLRDLEDQL 77
>SB_5006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 657
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 288 SERRANALQNELEESRTLLEQADRARRQAEQELSDAHE 401
+E R L +ELE + + +Q ++AR AEQ + E
Sbjct: 204 NEERVQTLTSELESTILIKQQQEKARLAAEQLVKQERE 241
>SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 769
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 279 LGISERRANALQNEL---EESRTLLEQADRARRQAEQELSDAHE 401
+G SE R + +L EES + ++ DR R + EQEL+ E
Sbjct: 231 IGTSEERKAIFKEQLKQLEESSRIDKEKDRLRLEEEQELTKQEE 274
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +3
Query: 132 INELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANAL 311
I+ LE+ ++ + N + + I Q+K+ +TA + + R L
Sbjct: 2491 ISRLEVNYENIKERNKDLKDEIAELMIQVKEAKTAAKSNEQDKKDLENEIISLKGRIKKL 2550
Query: 312 QNELEESRTLLE----QADRARRQAEQELSD 392
+ LEE R L E Q + R++ + + D
Sbjct: 2551 EIALEEERRLKENLKSQVNDYRKRGDDQSKD 2581
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 105 RMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQI 218
+++ LE+DINE E ++ + A E Q+ K + Q+
Sbjct: 803 KLRAHLESDINEKEKEIERKDNALKEFQEKNKELECQL 840
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 6 EEEFENTRKNHQRALDSMQ--XXXXXXXXXXXXXXRMKKKLEADINELEIALDHANKANA 179
EE+ EN K H+ LD +Q ++K +++ + NE++ L+H +A
Sbjct: 2043 EEDMENLNKEHKLKLDELQEAHRLDQKSEVAAIEKKLKTQMKKNQNEMKKLLNH-KEALL 2101
Query: 180 EAQKNI 197
+AQ +
Sbjct: 2102 QAQSAV 2107
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 277 SSASRSVAPMLFRTNWKSPAHSWSRPTAP 363
SS SRS + R+ +SP SWSR +P
Sbjct: 414 SSRSRSYSRSASRSYSRSPVRSWSRSHSP 442
>SB_41935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 350 GRPRPSPGRAGTQRRPRATQRALRTERFPLCRQEETRVR 466
GRP P PG+ G Q P R +R+ L +++ R +
Sbjct: 205 GRPVPVPGKRGLQDTPSEELIIARIKRYALDDRKKGRTK 243
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.122 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,350,842
Number of Sequences: 59808
Number of extensions: 155720
Number of successful extensions: 789
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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