Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30307
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    35   0.002
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    31   0.022
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    28   0.16 
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         23   7.7  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         23   7.7  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         23   7.7  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         23   7.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.7  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 34.7 bits (76), Expect = 0.002
 Identities = 21/92 (22%), Positives = 41/92 (44%)
 Frame = +3

Query: 111 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 290
           +++L+ ++NEL  A    ++   E  + + + Q  +K LQ  L             +   
Sbjct: 718 REQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVVFEG 777

Query: 291 ERRANALQNELEESRTLLEQADRARRQAEQEL 386
           E     L+ ELE SRT+L +  +   + + +L
Sbjct: 778 ETEETTLREELEHSRTILAKLQKGIEEEQAKL 809



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 18/93 (19%), Positives = 35/93 (37%)
 Frame = +3

Query: 114 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISE 293
           KKL   I E E  + +     A+    I  Y+A I+  +                L   +
Sbjct: 336 KKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKEAYGTVRRTLQDVQ 395

Query: 294 RRANALQNELEESRTLLEQADRARRQAEQELSD 392
            +  A++  +  +   + +  +  RQ EQ+L +
Sbjct: 396 AKQAAIERGMRNASERVTRIQKDARQIEQDLQE 428


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 31.1 bits (67), Expect = 0.022
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
 Frame = +3

Query: 117 KLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTA---LXXXXXXXXXXXXXLGI 287
           +L+++IN+     ++  K  +E  + +KR +  I  ++T+   L             +G 
Sbjct: 416 RLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGT 475

Query: 288 SERRANALQNELEESRTLLEQA-----DRARRQAEQEL 386
           S+ R + LQ+EL+  R  L  A     + ARR+ +QE+
Sbjct: 476 SKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEV 513


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 114 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDL 227
           + LEA + E + A D ++      QKN+ RY  QI ++
Sbjct: 853 RALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEI 890


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = +3

Query: 150 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 329
           A  +A++  AEA  N+K+ Q   K    AL               I++    ++ +E+ +
Sbjct: 55  ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 111

Query: 330 SRTLLEQADRARRQAEQELSDAHE 401
           +R   E+ +   +  EQ L+ A E
Sbjct: 112 AR---EKLNTVSKLTEQALTRARE 132


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = +3

Query: 150 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 329
           A  +A++  AEA  N+K+ Q   K    AL               I++    ++ +E+ +
Sbjct: 55  ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 111

Query: 330 SRTLLEQADRARRQAEQELSDAHE 401
           +R   E+ +   +  EQ L+ A E
Sbjct: 112 AR---EKLNTVSKLTEQALTRARE 132


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = +3

Query: 150 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 329
           A  +A++  AEA  N+K+ Q   K    AL               I++    ++ +E+ +
Sbjct: 55  ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 111

Query: 330 SRTLLEQADRARRQAEQELSDAHE 401
           +R   E+ +   +  EQ L+ A E
Sbjct: 112 AR---EKLNTVSKLTEQALTRARE 132


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = +3

Query: 150 ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 329
           A  +A++  AEA  N+K+ Q   K    AL               I++    ++ +E+ +
Sbjct: 55  ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 111

Query: 330 SRTLLEQADRARRQAEQELSDAHE 401
           +R   E+ +   +  EQ L+ A E
Sbjct: 112 AR---EKLNTVSKLTEQALTRARE 132


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = +3

Query: 150  ALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEE 329
            A  +A++  AEA  N+K+ Q   K    AL               I++    ++ +E+ +
Sbjct: 1194 ARQYADRFKAEADANMKQAQEAHKKASEAL---KKANDAFNQQANITKELDTSISSEIAQ 1250

Query: 330  SRTLLEQADRARRQAEQELSDAHE 401
            +R   E+ +   +  EQ L+ A E
Sbjct: 1251 AR---EKLNTVSKLTEQALTRARE 1271


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.122    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,600
Number of Sequences: 2352
Number of extensions: 4305
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)