Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30304
         (326 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p pro...    41   3e-04
AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA...    41   3e-04
AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB...    41   3e-04
BT024948-1|ABE01178.1|  224|Drosophila melanogaster IP16013p pro...    29   1.0  

>BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p
           protein.
          Length = 512

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
 Frame = +1

Query: 79  GRVYASPMARRLAEIKHIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------------ 222
           GRVYASPMA+RLAE + +R                                         
Sbjct: 223 GRVYASPMAKRLAEAQQLRLQGKGSGVHGSIKSGDLAGQKAAAKPAAAAPAKAPRAAGAR 282

Query: 223 FVDLPLSGMRETIAKRLTVAKQSIPHYQLSV 315
           + D+P++ MR  IAKRL  +K  +PHY ++V
Sbjct: 283 YEDIPVTNMRAVIAKRLLESKTQLPHYYVTV 313


>AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA,
           isoform A protein.
          Length = 421

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
 Frame = +1

Query: 79  GRVYASPMARRLAEIKHIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------------ 222
           GRVYASPMA+RLAE + +R                                         
Sbjct: 132 GRVYASPMAKRLAEAQQLRLQGKGSGVHGSIKSGDLAGQKAAAKPAAAAPAKAPRAAGAR 191

Query: 223 FVDLPLSGMRETIAKRLTVAKQSIPHYQLSV 315
           + D+P++ MR  IAKRL  +K  +PHY ++V
Sbjct: 192 YEDIPVTNMRAVIAKRLLESKTQLPHYYVTV 222


>AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB,
           isoform B protein.
          Length = 512

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
 Frame = +1

Query: 79  GRVYASPMARRLAEIKHIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------------ 222
           GRVYASPMA+RLAE + +R                                         
Sbjct: 223 GRVYASPMAKRLAEAQQLRLQGKGSGVHGSIKSGDLAGQKAAAKPAAAAPAKAPRAAGAR 282

Query: 223 FVDLPLSGMRETIAKRLTVAKQSIPHYQLSV 315
           + D+P++ MR  IAKRL  +K  +PHY ++V
Sbjct: 283 YEDIPVTNMRAVIAKRLLESKTQLPHYYVTV 313


>BT024948-1|ABE01178.1|  224|Drosophila melanogaster IP16013p
           protein.
          Length = 224

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 241 SGMRETIAKRLTVAKQSIPHYQLSV 315
           + MR  IAKRL  +K  +PHY ++V
Sbjct: 1   TNMRAVIAKRLLESKTQLPHYYVTV 25


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,833,732
Number of Sequences: 53049
Number of extensions: 85559
Number of successful extensions: 410
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 693319869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)