Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30304
         (326 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...    46   6e-06
Z81044-2|CAB02813.1|  337|Caenorhabditis elegans Hypothetical pr...    41   2e-04

>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score = 46.0 bits (104), Expect = 6e-06
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +1

Query: 223 FVDLPLSGMRETIAKRLTVAKQSIPHYQLS 312
           + D+PLS MR+TIAKRLT +K +IPHY L+
Sbjct: 275 YTDIPLSNMRKTIAKRLTESKSTIPHYYLT 304


>Z81044-2|CAB02813.1|  337|Caenorhabditis elegans Hypothetical
           protein C30H6.7 protein.
          Length = 337

 Score = 41.1 bits (92), Expect = 2e-04
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +1

Query: 229 DLPLSGMRETIAKRLTVAKQSIPHYQLSVTV 321
           D+PLS +R TIAKRLT +KQ IPH    V V
Sbjct: 102 DIPLSNIRATIAKRLTASKQQIPHEYQGVDV 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,740,129
Number of Sequences: 27780
Number of extensions: 37512
Number of successful extensions: 133
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)