Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30302
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.92 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.92 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.92 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.92 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.92 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   3.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   3.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -1

Query: 213  HHPS-SSWTHPSLPSWFPFACTS 148
            H PS SSW  P+ PS+ P + T+
Sbjct: 1159 HKPSTSSWQKPTKPSYRPPSTTN 1181


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 235 PPYCLSKSPPIKFLD 191
           PPY   +SPP+ FL+
Sbjct: 442 PPYLFFESPPVVFLN 456


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 235 PPYCLSKSPPIKFLD 191
           PPY   +SPP+ FL+
Sbjct: 442 PPYLFFESPPVVFLN 456


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 235 PPYCLSKSPPIKFLD 191
           PPY   +SPP+ FL+
Sbjct: 442 PPYLFFESPPVVFLN 456


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 235 PPYCLSKSPPIKFLD 191
           PPY   +SPP+ FL+
Sbjct: 442 PPYLFFESPPVVFLN 456


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -2

Query: 110 HCVNTAPANGRCHC 69
           HCVN      RC C
Sbjct: 43  HCVNLPGVGHRCQC 56


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 214 SPPIKFLDASFTSFMVSFCVYIVI 143
           +PPIKF++ S T    +  +Y V+
Sbjct: 41  APPIKFINKSSTDKFGNGAIYEVL 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,998
Number of Sequences: 336
Number of extensions: 2606
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)