BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30301 (516 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 7.5 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.5 AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 7.5 X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 10.0 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 10.0 >AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. Length = 145 Score = 21.0 bits (42), Expect = 7.5 Identities = 7/16 (43%), Positives = 8/16 (50%) Frame = -3 Query: 58 SVREEVGVERHCYTCR 11 SV G + CY CR Sbjct: 80 SVASTTGFSKECYCCR 95 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 21.0 bits (42), Expect = 7.5 Identities = 10/40 (25%), Positives = 15/40 (37%) Frame = +2 Query: 158 GPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSP 277 GP R H + P HD T + + + + SP Sbjct: 1066 GPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRISWMSP 1105 >AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta protein precursor protein. Length = 145 Score = 21.0 bits (42), Expect = 7.5 Identities = 7/16 (43%), Positives = 8/16 (50%) Frame = -3 Query: 58 SVREEVGVERHCYTCR 11 SV G + CY CR Sbjct: 80 SVASTTGFSKECYCCR 95 >X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor protein. Length = 144 Score = 20.6 bits (41), Expect = 10.0 Identities = 16/64 (25%), Positives = 24/64 (37%) Frame = +2 Query: 29 SLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRA 208 +L+P P + PE E +N P P ++RRE P + P + Sbjct: 22 NLDPPTRPTRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQP 81 Query: 209 PPNH 220 P H Sbjct: 82 RPPH 85 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 20.6 bits (41), Expect = 10.0 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = +1 Query: 151 GAWPHRELPASSPQPSNEGTS 213 G PH + P SPQ + +S Sbjct: 433 GKLPHDDQPPLSPQSDSSSSS 453 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 140,261 Number of Sequences: 438 Number of extensions: 3297 Number of successful extensions: 5 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 14354847 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -