Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30298
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z83246-2|CAB05841.1| 292|Caenorhabditis elegans Hypothetical pr... 54 6e-08
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 1.5
U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical pr... 28 3.4
U88311-4|AAB42344.1| 537|Caenorhabditis elegans Udp-glucuronosy... 28 3.4
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 28 3.4
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 28 3.4
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 28 3.4
U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related... 28 4.6
AF067216-9|AAC17520.2| 646|Caenorhabditis elegans Hypothetical ... 28 4.6
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73908-3|CAC42305.1| 184|Caenorhabditis elegans Hypothetical pr... 27 6.0
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 27 6.0
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 27 8.0
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 27 8.0
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = +3
Query: 165 GDDVPKK-IPHTLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPKVLITY 341
G+ P+K +P T+E++RE D TM+ EE +E + D DE + Y+ PKV+IT
Sbjct: 128 GESAPQKEVPKTIESMREYDATMV----NEEDDEVEHDEANDEFAPYFNRETSPKVMITM 183
Query: 342 SDNPHSKTRIFGRELTRIIPNSLSRYRQRSSVKRIVQSAIREDVTDVIIINENQRQPN 515
+ T F EL + IPNS R+ +K I++ A + TD+++++E++++PN
Sbjct: 184 TPKAKITTFKFCFELQKCIPNSEIFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPN 241
>Z83246-2|CAB05841.1| 292|Caenorhabditis elegans Hypothetical
protein ZK795.3 protein.
Length = 292
Score = 54.0 bits (124), Expect = 6e-08
Identities = 24/71 (33%), Positives = 44/71 (61%)
Frame = +3
Query: 303 YENSYEPKVLITYSDNPHSKTRIFGRELTRIIPNSLSRYRQRSSVKRIVQSAIREDVTDV 482
+ + +PK++IT S +P S+ ++F +E+ I PN+ R VK++VQ++ +D TD+
Sbjct: 72 WAGAQDPKIVITTSRDPSSRLKMFAKEMKLIFPNAQRINRGHYDVKQVVQASKAQDSTDL 131
Query: 483 IIINENQRQPN 515
II E + P+
Sbjct: 132 IIFTETRGNPD 142
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical protein
H03E18.1 protein.
Length = 1147
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 195 TLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYE--PKVLITYSDNPHSKTR 368
T+ETL + N D++E+E+ KD L E+ E K+ IT S P S +
Sbjct: 879 TIETLLKAKIPESSNVDSQEKEDINKDPRLVEMKKVEAQVLEKLAKMEITESTAPDSTSS 938
Query: 369 IFGREL-TRIIPNSLSRYRQRSSVKRIVQSA 458
+ T + +++ ++S+K + A
Sbjct: 939 TIPENIETESTSSEITKQTAKTSMKSSIPEA 969
>U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical
protein ZK328.4 protein.
Length = 532
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +3
Query: 180 KKIPHTLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPKVLITYSDNPHS 359
+KIP + + + D+ + + EE EE ++D++ +E Y E+S E + I+YSD
Sbjct: 199 RKIPVKKDFVVD-DDYISEESSEEESEEEEEDVDDEE---YRESSPEVEAKISYSDRKQK 254
Query: 360 K 362
K
Sbjct: 255 K 255
>Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 171 DVPKKIPHTLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPKVLITYSDN 350
+ P I E+ E+ A E ++ E ++ S Y S E +V I +N
Sbjct: 717 EAPSTIGSLKRKATEESESSSTPAAKRESIRNKQKKEKEQYSAYPYVSEEEEVAIF--EN 774
Query: 351 PHSKTRIFGRELTRII 398
+ +++GREL R++
Sbjct: 775 SNGNPQVYGRELGRLL 790
>Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 171 DVPKKIPHTLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPKVLITYSDN 350
+ P I E+ E+ A E ++ E ++ S Y S E +V I +N
Sbjct: 717 EAPSTIGSLKRKATEESESSSTPAAKRESIRNKQKKEKEQYSAYPYVSEEEEVAIF--EN 774
Query: 351 PHSKTRIFGRELTRII 398
+ +++GREL R++
Sbjct: 775 SNGNPQVYGRELGRLL 790
>U88311-4|AAB42344.1| 537|Caenorhabditis elegans
Udp-glucuronosyltransferase protein28 protein.
Length = 537
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 172 SSPSCFFSNLRFFLSFPRAIL 110
SS S FF N FL FPRA+L
Sbjct: 248 SSASIFFVNANPFLDFPRAVL 268
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 219 DETMLVNADTEEQEEAQKDMELDELSTYYENSYEPKVLITYSDNPHSKTR 368
+E + + EA + LS Y +S+ PK+L ++ PHS R
Sbjct: 919 EEAPVKKSTKRRASEADSKLPDRPLSDTYTSSFTPKLLPVFAQPPHSALR 968
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 219 DETMLVNADTEEQEEAQKDMELDELSTYYENSYEPKVLITYSDNPHSKTR 368
+E + + EA + LS Y +S+ PK+L ++ PHS R
Sbjct: 899 EEAPVKKSTKRRASEADSKLPDRPLSDTYTSSFTPKLLPVFAQPPHSALR 948
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 219 DETMLVNADTEEQEEAQKDMELDELSTYYENSYEPKVLITYSDNPHSKTR 368
+E + + EA + LS Y +S+ PK+L ++ PHS R
Sbjct: 899 EEAPVKKSTKRRASEADSKLPDRPLSDTYTSSFTPKLLPVFAQPPHSALR 948
>U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related
family protein 6 protein.
Length = 982
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 273 DMELDELSTYYENSYEPKVLITYSDNPHSKTRIFGRELTRIIPNSLSRYRQR 428
D E ++L+ ++E++ E V TY+D+P + I + +RI+ L+R R
Sbjct: 249 DEEQEQLAKFWEDTAEKFVRETYADHPTIQCHI---KHSRIVDQGLTRNANR 297
>AF067216-9|AAC17520.2| 646|Caenorhabditis elegans Hypothetical
protein C35E7.4 protein.
Length = 646
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 183 KIPHTLETLREKDETMLVNADTEEQEEAQKDMELDEL 293
+ PH + D T +V A E+ + KD ELDE+
Sbjct: 503 QFPHQFVDVNPGDVTNMVIAQVHEEIDGLKDPELDEI 539
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical
protein T08G11.1b protein.
Length = 3185
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 64 NEFKKHYFSCIKYKSTKWLVERIKK---NAS*KRNKREMMYLRKSLTRW 201
NEFK HY + K+ T L E++++ N S R ++ +RK W
Sbjct: 323 NEFKGHYKAWWKFAYTSILEEKVRRRRNNWSWDRMQKHRQLVRKYQKAW 371
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical
protein T08G11.1a protein.
Length = 3212
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 64 NEFKKHYFSCIKYKSTKWLVERIKK---NAS*KRNKREMMYLRKSLTRW 201
NEFK HY + K+ T L E++++ N S R ++ +RK W
Sbjct: 323 NEFKGHYKAWWKFAYTSILEEKVRRRRNNWSWDRMQKHRQLVRKYQKAW 371
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 213 EKDETMLVNADTEEQEEAQKDMELDE---LSTYYENSYEPKVLITYSDNPHSKT 365
EK+ET NA+ E++EE++K E DE +S+++ + + K + SD+ ++
Sbjct: 25 EKEETTK-NAEKEKEEESEKIAESDEKPTISSFFFSGDDDKAGSSDSDDSEGES 77
>Z73908-3|CAC42305.1| 184|Caenorhabditis elegans Hypothetical
protein F53B2.8 protein.
Length = 184
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 198 LETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPKVLITYSDNPHSKTRIFG 377
LE L + + + + EEQ+ A+KD +L+ + + E L + + PH + G
Sbjct: 82 LEKLEKLELQLTLKRSREEQKRAKKDKKLERKALKIQKKLE--ALRSIKEKPHQGSEAQG 139
Query: 378 RELTR 392
++ R
Sbjct: 140 PKVPR 144
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 180 KKIPHTLETLREKDETMLVNADTEEQEEAQKDMELDEL 293
+K+P LE+L + +T + + E++EE + + ELD +
Sbjct: 185 EKLPQALESLEKALKTCRKSFEDEDREEDEIEEELDSI 222
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 192 HTLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPK 326
H +E +E ++ L+ +EQ+E ++ + DE E EP+
Sbjct: 649 HEIEEHKEPEKLGLIIDPEDEQDETKRFVNHDEFEQSLEEELEPR 693
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 192 HTLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPK 326
H +E +E ++ L+ +EQ+E ++ + DE E EP+
Sbjct: 647 HEIEEHKEPEKLGLIIDPEDEQDETKRFVNHDEFEQSLEEELEPR 691
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 192 HTLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPK 326
H +E +E ++ L+ +EQ+E ++ + DE E EP+
Sbjct: 649 HEIEEHKEPEKLGLIIDPEDEQDETKRFVNHDEFEQSLEEELEPR 693
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 192 HTLETLREKDETMLVNADTEEQEEAQKDMELDELSTYYENSYEPK 326
H +E +E ++ L+ +EQ+E ++ + DE E EP+
Sbjct: 647 HEIEEHKEPEKLGLIIDPEDEQDETKRFVNHDEFEQSLEEELEPR 691
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,366,722
Number of Sequences: 27780
Number of extensions: 206970
Number of successful extensions: 906
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -