Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30296
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16) 139 1e-33
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 118 4e-27
SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14) 114 5e-26
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 7e-15
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 69 2e-12
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 69 2e-12
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 69 3e-12
SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096) 58 4e-09
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 7e-09
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 51 5e-07
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 50 1e-06
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 49 3e-06
SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 48 3e-06
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 45 3e-05
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 44 6e-05
SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 38 0.005
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 36 0.020
SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 35 0.035
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 33 0.11
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 33 0.14
SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14) 33 0.18
SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 32 0.32
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_2494| Best HMM Match : M (HMM E-Value=0.0056) 30 0.98
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 29 2.3
SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_48953| Best HMM Match : NIF3 (HMM E-Value=1.7e-12) 28 5.3
SB_3682| Best HMM Match : efhand (HMM E-Value=7.4e-05) 28 5.3
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 27 6.9
SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14) 27 6.9
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 27 6.9
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 27 6.9
SB_36048| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_34777| Best HMM Match : VWA (HMM E-Value=0) 27 9.2
>SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16)
Length = 168
Score = 139 bits (336), Expect = 1e-33
Identities = 67/128 (52%), Positives = 95/128 (74%), Gaps = 3/128 (2%)
Frame = +1
Query: 142 QSSRGSRK-AKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLA 318
+ +GS+K A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I KNDL+A FDSLG+L
Sbjct: 4 KGKKGSKKKAQRATSNVFAMFEQSQIQEFKEAFNMIDQNRDGFIDKNDLKAVFDSLGKLV 63
Query: 319 SEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLR 492
+++ +++M+ EASGPINFT LTLF ++S G+D +DV+ NAF +FD EGK ID E+L+
Sbjct: 64 NDEYVEDMLNEASGPINFTMFLTLFGEKIS-GTDPEDVIRNAFGSFDLEGKGSIDEEKLK 122
Query: 493 HALMTWGD 516
M+ D
Sbjct: 123 RLCMSMSD 130
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 118 bits (283), Expect = 4e-27
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Frame = +1
Query: 160 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 339
++A R SNVF+MF Q Q+ EFKEAF ++D + DG I K DL SLG+ ++ L+E
Sbjct: 12 KRAHRATSNVFAMFDQSQIQEFKEAFNMIDQNHDGFIDKEDLHDMLASLGKDPTDGYLEE 71
Query: 340 MVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWG 513
MV E+ GPINFT LTLF +++ G+D +DV+ NAF FDE+ G+I + L+ A+M+ G
Sbjct: 72 MVKESPGPINFTMFLTLFGEKLN-GTDPEDVIRNAFACFDEDGNGRIHEDLLKEAMMSMG 130
Query: 514 D 516
D
Sbjct: 131 D 131
>SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14)
Length = 133
Score = 114 bits (274), Expect = 5e-26
Identities = 58/122 (47%), Positives = 85/122 (69%), Gaps = 3/122 (2%)
Frame = +1
Query: 160 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 339
++A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I K DL+ + SLG+ +++ LD+
Sbjct: 12 KRAQRATSNVFAMFDQTQIQEFKEAFNMIDQNRDGFIDKEDLKDMYASLGKSPNDQFLDD 71
Query: 340 MVGEASG-PINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTW 510
M+ EASG INFT LTLF +++ G+D +DV+ NAF FDEE G+I ++L L +
Sbjct: 72 MIEEASGSTINFTMFLTLFGEKLN-GTDPEDVIKNAFGCFDEEGDGRIHEDKLCDMLTSV 130
Query: 511 GD 516
GD
Sbjct: 131 GD 132
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 77.4 bits (182), Expect = 7e-15
Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Frame = +1
Query: 202 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 369
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 370 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGD 516
F + LT+ A +M +D ++ + AF+ FD++G I + LRH + G+
Sbjct: 66 FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 115
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 354
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 69.3 bits (162), Expect = 2e-12
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Frame = +1
Query: 223 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLTL 390
FKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+F + LT+
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 61
Query: 391 FANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGD 516
A +M +D ++ + AF+ FD++G I + LRH + G+
Sbjct: 62 MARKMK-NTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 104
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQ 378
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA G +N+ +
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYDE 130
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 69.3 bits (162), Expect = 2e-12
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Frame = +1
Query: 223 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLTL 390
FKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+F + LT+
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 61
Query: 391 FANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGD 516
A +M +D ++ + AF+ FD++G I + LRH + G+
Sbjct: 62 MARKMK-NTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 104
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQ 378
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA G +N+ +
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYDE 130
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 68.5 bits (160), Expect = 3e-12
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Frame = +1
Query: 181 SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA-- 354
S+V S++QVAE KEAF L D D G I ++L SLG+ +E+EL +M+ E
Sbjct: 278 SSVREKLSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMIAEVDQ 337
Query: 355 --SGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDE--EGKIDSERLRHALMTWGD 516
+G I+F + L + A ++ +D ++ + +AFK FD+ +G I S L+ + G+
Sbjct: 338 DDNGEIDFPEFLQMVAKKIK-ETDTEEEIQDAFKVFDKNGDGMISSSELKLVMSNLGE 394
Score = 40.7 bits (91), Expect = 7e-04
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 354
E ++AF++ D + DG+I ++L+ +LG ++ E+DEM+ EA
Sbjct: 364 EIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMIREA 408
>SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096)
Length = 322
Score = 58.0 bits (134), Expect = 4e-09
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +1
Query: 277 NDLRATFDSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTF 456
+DLR T SLG+ + +E+D+M+ E NFT L++F RM+ +D +D+++ AF
Sbjct: 178 DDLRGTLSSLGQKPTFEEIDDMM-EGKPSFNFTSFLSMFGLRMA-NTDPEDIILRAFSCL 235
Query: 457 DE--EGKIDSERLRHALMTWG 513
D+ +GK+ ++ LR L T G
Sbjct: 236 DDGGDGKLSAKMLRELLTTMG 256
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 57.2 bits (132), Expect = 7e-09
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Frame = +1
Query: 217 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLL 384
A++KEAF + D D G + +L +LG +E+E+ EMV E +G ++F + +
Sbjct: 148 AQYKEAFHMYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMVNEVDYDGNGVLDFNEFV 207
Query: 385 TLFANRMSGGSDEDDVVINAFKTF--DEEGKIDSERLRHAL 501
L N+ +E D +INAF F D++G I++ LR L
Sbjct: 208 DLMENQKKPDEEEQD-LINAFHVFDSDDKGYIEASELRDLL 247
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 51.2 bits (117), Expect = 5e-07
Identities = 28/89 (31%), Positives = 53/89 (59%)
Frame = +1
Query: 202 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQL 381
S+ Q+AE+KEAF + D+D++G I ++L + +LG+ +E + +M+ A + T+
Sbjct: 5 SKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQNPTEDMIRDMIASA----DRTEF 60
Query: 382 LTLFANRMSGGSDEDDVVINAFKTFDEEG 468
L++ SG + E + AFK+ D++G
Sbjct: 61 LSMMCTVQSGKTQE---IRMAFKSMDKDG 86
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 354
E + AF+ MD D DG I DL+ T S+ +L M+ +A
Sbjct: 74 EIRMAFKSMDKDGDGFITFGDLKKTMQECDENLSDDDLKRMIIDA 118
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 50.4 bits (115), Expect = 9e-07
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +1
Query: 202 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPIN 369
+++Q+ EFK AF D + DG I +L S+G ++EL M+ +A SG I+
Sbjct: 10 TEEQIREFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDID 69
Query: 370 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEG 468
+ + L A++ + E D + AF FD++G
Sbjct: 70 LPEFIELMASKSKNDTTESD-LREAFSLFDKDG 101
Score = 47.6 bits (108), Expect = 6e-06
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLT 387
EFK AF D + DG I +L S+G ++EL M+ +A SG I+ + +
Sbjct: 145 EFKNAFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIE 204
Query: 388 LFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWG 513
L A++ + E D + AF FD++G I ++ ++ L G
Sbjct: 205 LMASKSKNDTTESD-LREAFSLFDKDGNGLISAQEMKFVLTCMG 247
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 217 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 384
++ +EAF L D D +G+I +++ F +G +EKE E+V +A G IN+ +
Sbjct: 88 SDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKEAVELVKQADMDGDGHINYEEFK 147
Query: 385 TLF 393
F
Sbjct: 148 NAF 150
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 217 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 354
++ +EAF L D D +G+I +++ +G +EKE E+V +A
Sbjct: 217 SDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELVKQA 262
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Frame = +1
Query: 301 SLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEG 468
SLG+ +E EL +M+ E +G I+F + LT+ A +M G D D+ + AF+ FD++G
Sbjct: 3 SLGQNPTEAELQDMINEVDADGNGIIDFPEFLTMMAKKM-GEQDSDEEIREAFRVFDKDG 61
Query: 469 K--IDSERLRHALMTWGD 516
I + LRH + G+
Sbjct: 62 NGFISAAELRHVMTNLGE 79
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Frame = +1
Query: 196 MFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGP 363
M Q E +EAF++ D D +G I +LR +LG +++E++EM+ EA G
Sbjct: 41 MGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEADIDGDGQ 100
Query: 364 INFT-----QLLTLFAN 399
+N+ LT FAN
Sbjct: 101 VNYEGGVSYMFLTSFAN 117
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Frame = +1
Query: 202 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV---------GEA 354
++ QV E KEAF + D + DG I +L+ SLG +E EL +M+ +
Sbjct: 207 TESQVREIKEAFLVFDDNGDGCITATELKKLVTSLGYNITEAELMDMMNQIAFLFVDSDG 266
Query: 355 SGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWG 513
+G I+F + L L + +D DD + F+ FD + I E ++ L G
Sbjct: 267 NGAIDFPEFLQLMTKNLQ-DADPDDTMQETFRVFDRDNNNSIGVEEVQRVLKLLG 320
>SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21)
Length = 202
Score = 48.4 bits (110), Expect = 3e-06
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EASGPINFTQLLT 387
++++AF+ D D G I +L SLG +E EL +M+ + +G +NF + +
Sbjct: 51 KYRDAFEHFDKDSSGSITTRELGGIMRSLGENPTEIELQDMINSVDCDGNGLMNFDEFVK 110
Query: 388 LFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHAL 501
L + DE+D ++ AF+ FD +G+ + S LR L
Sbjct: 111 LMITKNQFMMDEED-MLEAFRMFDRDGRGYVMSSDLRFVL 149
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 45.2 bits (102), Expect = 3e-05
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +1
Query: 136 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG-- 309
D +RGS+ +R ++Q E KEAF L D DKD I ++L+ +LG
Sbjct: 9 DYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALGFD 61
Query: 310 --RLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKID 477
+ K + + E++G I+F + + M D + V AF+ FD++ GKI
Sbjct: 62 VKKADVLKIMKDYDRESTGKISFDDFNEVMTDWML-DRDPQEEVFKAFRLFDDDDSGKIS 120
Query: 478 SERLRHALMTWGD 516
LR G+
Sbjct: 121 LRNLRRVARELGE 133
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = +1
Query: 217 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 384
AE +EAF++ D + DG I + +LR+ SLG S+ E+ EM+ EA G INF + +
Sbjct: 73 AEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREADLDGDGVINFQEFV 132
Query: 385 TL 390
+
Sbjct: 133 QM 134
>SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 41.1 bits (92), Expect = 5e-04
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 202 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSL-GRLASEKELDEMVGEASGPINFTQ 378
SQ+Q +AFQL D G + K+DL+ F L G S E+ E++ +++ +
Sbjct: 6 SQEQKTNILQAFQLADKTSKGYLDKHDLKVAFVYLFGYKPSSYEVQELMNKSNDDTSSGM 65
Query: 379 LLTLF---ANRMSGGSDEDDVVINAFKTFDEE 465
+ F A+ + D DD + F+ FD E
Sbjct: 66 TIDTFLRIASTKTLAQDPDDHIRQVFQAFDME 97
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 37.9 bits (84), Expect = 0.005
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Frame = +1
Query: 175 TGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE- 351
T +FS++Q+ EF++AF + + D I + SLG E E+ E + E
Sbjct: 213 TDQEAAKLFSREQIEEFEDAFSVYNKDGSDNIKTTLVFNLIRSLGHNPPEHEVWEYLNEL 272
Query: 352 ---ASGPINFTQLLTLFANRMSGGSDEDDV--VINAFKTFDEEGKIDSERLRHAL 501
A+ + F + L A ++ + E ++ +N F T D+ G I E L A+
Sbjct: 273 GLTANSKLKFRDFVKLMAVIITEQNTEKEINSALNVFDT-DQRGYITVEELVEAI 326
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 214 VAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 351
++++++AF+ D D +G I +L A SLG+ +E EL +MV E
Sbjct: 47 ISKYRDAFKFFDKDGNGHITTRELGAIMRSLGQNPTENELQDMVNE 92
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 36.3 bits (80), Expect = 0.015
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Frame = +1
Query: 202 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASE-----KELDEMVG----EA 354
+++Q+ EF+ +F D D+ G + N+ + SLG E +E + ++G
Sbjct: 512 TEEQMKEFRASFNFFDKDQTGKLEPNEFKQCLVSLGYNIKEGDKGDREFERLLGIVDPNG 571
Query: 355 SGPINFTQLLTLFANRMSGGSDEDDVVINAFKTF-DEEGKIDSERLRHAL 501
+G + F Q F R + SD + V+ +F+ ++ I +E LR L
Sbjct: 572 TGKVTF-QAFVDFMTRETADSDTAEQVMESFRILAGDKPFITAEELRREL 620
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 223 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 351
+++AF+ D D +G I +L A SLG+ +E EL +MV E
Sbjct: 2 YRDAFKFFDKDGNGHITTRELGAIMRSLGQNPTENELQDMVNE 44
>SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +1
Query: 199 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSL--GRLASEKELDEMVGEA----SG 360
F K + +AF + D DK G + L+A F+S+ E+E+ ++ A G
Sbjct: 801 FYHKTDTDILDAFHVFDRDKMGYFDLDKLKAAFESMPDSDTIDEEEMASLIAIADSNQDG 860
Query: 361 PINFTQLLTLFANRMSGGSDEDDV 432
+ F + + G D DDV
Sbjct: 861 KVYFQDSYNRYVDNQDNGDDNDDV 884
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 223 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE-MVG 348
F E F++ D + +G+IG +LR SLG S++E+D MVG
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNLMVG 49
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +1
Query: 193 SMFSQKQVA---EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEM---VGEA 354
S + +KQ EF E ++ D D G + +LR+ SLG S++E+ + V ++
Sbjct: 578 SAYQKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEEVTTLFAPVDDS 637
Query: 355 SGPINF 372
SG IN+
Sbjct: 638 SGHINY 643
Score = 32.7 bits (71), Expect = 0.18
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLG---RLASEKELDEMVG-EASGPINFTQLLT 387
E++EAF L D DG I + + SLG A K++++ V + ++F + L
Sbjct: 515 EYREAFSLFDRVGDGKIECDQIGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLP 574
Query: 388 LFAN----RMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGD 516
++ + + +G +DE + + FD + G + + LR LM+ G+
Sbjct: 575 IYTSAYQKKQTGSADE---FVEGLRVFDRDGTGTVLAAELRSVLMSLGE 620
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 226 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAS----GPINFTQLLTLF 393
K+AF + D +KDG I + D R +S +E++ E++ + G I++ + L F
Sbjct: 462 KQAFLVFDDNKDGRITRRDFRRILESFCFRMTEEQFHELMAKIDPMNRGYISYLEFLDRF 521
Query: 394 ANRMSGGSD 420
+R S D
Sbjct: 522 EHRESPVED 530
>SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14)
Length = 227
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 226 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAS----GPINFTQLLTLF 393
K+AF + D +KDG I + D R +S +E++ E++ + G I++ + L F
Sbjct: 162 KQAFLVFDDNKDGRITRRDFRRILESFCFRMTEEQFHELMAKIDPMNRGYISYLEFLDRF 221
Query: 394 ANRMS 408
+R S
Sbjct: 222 EHRES 226
>SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 136 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 309
D +RGS+ +R ++Q E KEAF L D DKD I ++L+ +LG
Sbjct: 9 DYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP 363
+ +AF+++D DK G + +L G +++E++EM+ A P
Sbjct: 63 QLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDP 110
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +1
Query: 220 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV 345
+F ++ ++ D+D G+I + +LR +LG ++ E+D ++
Sbjct: 87 DFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLI 128
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +1
Query: 178 GSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAS 357
G ++ S S++ + + AF++ D D G + K ++ S+ RLA E+ ++ + +
Sbjct: 91 GLSIISRGSKE--TKLRWAFEIYDSDGSGEVSKKEMLEIVRSIFRLAGEEVTAKLPRDEN 148
Query: 358 GPINFTQLLTLFANRMSGGS 417
P FT L L + GS
Sbjct: 149 TPEKFTSKLFLKLDGDKSGS 168
>SB_2494| Best HMM Match : M (HMM E-Value=0.0056)
Length = 737
Score = 30.3 bits (65), Expect = 0.98
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +1
Query: 202 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQL 381
+Q++ FK + D DK + + + S+ + S++E+ + S T+
Sbjct: 549 AQREQDHFKSIYDACDKDKRNLNEQLITKTEELSMNVITSKEEIMRLQSRLSEEKKITES 608
Query: 382 LTLFANRMSGGSDEDDVVINAFKTF-DEEGKIDSERLRHALMTW 510
L NR+ DE +V ++ K EG D+E++RH LMT+
Sbjct: 609 L----NRVIAKKDE--MVNDSLKNIRTSEG--DAEKMRHELMTY 644
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 190 FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG--EASGP 363
+S Q + EF E + D++ DG + LR SLG + + D +V + G
Sbjct: 72 YSKKPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPDQADAIVALQDNHGT 131
Query: 364 INFTQLL 384
I + +L+
Sbjct: 132 IEYEKLV 138
>SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 136 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGI 267
D + + GS K T ++ FS+K+ + +A HD DG+
Sbjct: 196 DLREAYGSSTTKETSASQRVEFSRKKKGSYTDAIPSSTHDNDGM 239
>SB_48953| Best HMM Match : NIF3 (HMM E-Value=1.7e-12)
Length = 288
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 340 MVGEASGPINFTQLLTLFANRMSGGSDEDDVVINA-FKTFDEEGKIDSERLRHALMTWGD 516
M+GE P+N T+ L N+M G ++N K G S +++AL D
Sbjct: 166 MIGEFETPMNETEFLAFVKNKMQCGGIRHSALLNKNIKKVAVLGGSGSYAIKNALQAGAD 225
>SB_3682| Best HMM Match : efhand (HMM E-Value=7.4e-05)
Length = 340
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +1
Query: 262 GIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLL 384
G++ + LRA D+LGR+A+ +E+ E + E +SG ++F + L
Sbjct: 164 GVLCRILLRAIPDTLGRMATTEEIKEAMLEVDVDSSGTVDFFEFL 208
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 259 DGIIGKNDLRATFDSLGRLASEKELDEMV 345
+G + ND++ F + G S+KE+DE +
Sbjct: 2942 NGTLSYNDIKEYFKACGHQPSQKEIDEAI 2970
>SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14)
Length = 148
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 205 QKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINF 372
QK+ F DHD G I +++R +E E++ M+ A G ++F
Sbjct: 79 QKEQKCLSRVFNEFDHDSKGYILPSNIRRVLIKFNIDPNESEIEHMMEAADTNEDGKVDF 138
Query: 373 TQLLTLFA 396
+ + +F+
Sbjct: 139 EEFMHIFS 146
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 385 TLFANRMSGGSDEDDVVINAFKTF--DEEGKIDSERLRHALMTWGD 516
T+ A + D + ++ AFK F DE GKI + L+ G+
Sbjct: 45 TIDAKELKSEKDSKEEILKAFKLFDDDETGKISFKNLKRVAKELGE 90
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +1
Query: 280 DLRATFDSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDD 429
DL+ FD L S E G PIN T L L N S +++ D
Sbjct: 154 DLKTMFDQARALESAMRSSESYGAPQIPINATGLPALPCNSTSLSAEQPD 203
>SB_36048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 RMASSARTTCAPPSTP-WAGSRPRRSSM 337
R + +T+CAPP+ P G RP RS M
Sbjct: 202 RGSPKTKTSCAPPAPPRRIGRRPGRSRM 229
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 394 ANRMSGGSDEDDVVINAFKTFDEEGKIDSE 483
+N G D+D ++INA K F E D E
Sbjct: 98 SNNDQGADDDDVLLINALKRFKRENVDDDE 127
>SB_34777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1268
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 283 LRATFDSLGRLASEKELDEMVGEASGPINFTQLLTLFANRM 405
++ T LG+LA+ KEL E+ E FT L RM
Sbjct: 177 VKVTAIGLGKLANVKELIEIASEPKSSHVFTAFLDTLPERM 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.133 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,636,463
Number of Sequences: 59808
Number of extensions: 206466
Number of successful extensions: 924
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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