Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30294
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0997 + 7884974-7885043,7885689-7885975,7886056-7886311,788... 48 6e-06
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 42 4e-04
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 41 7e-04
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 40 0.001
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 39 0.002
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 36 0.026
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 32 0.24
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 32 0.24
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 30 0.96
11_05_0065 + 18766566-18766576,18767023-18767083,18767170-187672... 30 1.3
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 29 2.9
06_02_0055 + 10986228-10986388,10986717-10986899,10987013-10987652 28 5.1
05_04_0132 + 18303925-18307164 28 5.1
11_08_0033 + 27820563-27823482,27823593-27823996 27 6.8
11_01_0519 + 4066776-4066892,4067042-4067099,4067322-4067608,406... 27 6.8
09_02_0494 + 9875324-9875932 27 6.8
01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,708... 27 6.8
11_08_0029 - 27783907-27784310,27784418-27786616,27786751-27787333 27 8.9
10_05_0069 + 8782535-8782920,8783016-8783281,8783588-8783869,878... 27 8.9
07_01_0234 + 1715338-1718233,1718351-1718760 27 8.9
02_04_0291 + 21637700-21638164 27 8.9
>01_01_0997 +
7884974-7885043,7885689-7885975,7886056-7886311,
7886455-7886537,7886634-7886687,7887941-7888012,
7889093-7889155,7889274-7889324,7889432-7889513,
7889606-7889701,7889774-7889944,7890024-7890130,
7890229-7890326,7890798-7891048,7891235-7891398,
7891689-7891979,7892067-7892377,7892477-7892655,
7893231-7893301
Length = 918
Score = 47.6 bits (108), Expect = 6e-06
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Frame = +1
Query: 67 QEQEVLTWISDVLG----EPLPNGA-YEDVLRDGVILCKLANKLAPGSVKKI-------Q 210
+ + TW+ V+G P+ + +R+G++LCK NK+ PG+V K+
Sbjct: 26 RRHQAATWLESVIGPFGLSRCPSEQEFVAAVRNGIVLCKAINKIQPGAVPKVVANASCDS 85
Query: 211 ERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNI 333
+ T FQ ENI+ F A+++ +P F+ +DL E+ NI
Sbjct: 86 QPSTAFQYFENIRNFLVAVQELKLP---CFEASDL-EKDNI 122
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Frame = +1
Query: 142 LRDGVILCKLANKLAPGSVKKIQERGTN---------FQLMENIQRFQAAIKKYGVPEEE 294
LR+G++LC NK+ PGSV K+ E ++ +Q EN++ F ++ G+P
Sbjct: 88 LRNGIVLCNALNKVQPGSVPKVVEAPSDSADGAALCAYQYFENVRNFLMGLQDLGLP--- 144
Query: 295 IFQTADLFERRNIPQVTLCLYAL 363
F+ +DL + +V C+ +L
Sbjct: 145 TFEASDLEKGGKGVRVVDCVLSL 167
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 40.7 bits (91), Expect = 7e-04
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = +1
Query: 64 DQEQEVLTWISDVLGEP-LPNGAYEDVLR----DGVILCKLANKLAPGSVKKI-QERGTN 225
D+ EV+ W++ +L E LP + +D LR DG +LC + N L PG +++ ++
Sbjct: 15 DRRAEVIEWLNALLPEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEESWGAYASS 74
Query: 226 FQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 363
Q ++++F A + G+P F DL E ++ V CL L
Sbjct: 75 DQHAGHVKKFLAVVADMGLPG---FSVKDL-EEGSMSGVVDCLLVL 116
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 39.9 bits (89), Expect = 0.001
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Frame = +1
Query: 55 RNKDQEQEVLTWISDVLGEPLPNGAYEDV---LRDGVILCKLANKLAPGSVKKIQERGTN 225
R +D +L D+ P P ED+ L G +LC L +L PG++ + + T
Sbjct: 19 RREDVVGWLLALFPDLPLPPPPEATDEDLRAALATGRLLCALLRRLCPGAL--LDDAST- 75
Query: 226 FQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 363
+N+ RF+AA+++ GV + F +DL ER + V C+ AL
Sbjct: 76 ----DNVGRFRAAVERMGVAK---FSASDL-ERGQMTAVVNCILAL 113
>01_06_0675 +
31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +1
Query: 64 DQEQEVLTWISDVLGE-PLPNGAYEDVLRD----GVILCKLANKLAPGSVKKIQERGTNF 228
++ EV+ W+ +L E LP + ++ LRD G LC +A+KL PG V + G
Sbjct: 15 NRRAEVIDWLGGLLPEFDLPLDSSDEELRDYLINGEALCYVADKLMPG-VLEGTWGGYAS 73
Query: 229 QLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 363
N+++F + + + G+P F DL E ++ + CL AL
Sbjct: 74 DQRSNVKKFLSVVAEMGLPG---FGVKDL-EEGSMSSIVECLLAL 114
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 35.5 bits (78), Expect = 0.026
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1
Query: 109 EPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTN 225
EP N + D++RDGV+LCKL N PG+ I ER N
Sbjct: 156 EPTDNQLF-DLVRDGVLLCKLINLAVPGT---IDERAIN 190
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 67 QEQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 198
+E+ WI+ + + N +EDV G +L ++ +K++PGSV
Sbjct: 402 EERSFRMWINSLGVDSYVNNVFEDVRH-GWVLLEVLDKVSPGSV 444
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 109 EPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTN 225
+P N + +++RDGV+LCKL N PG+ I ER N
Sbjct: 153 DPSTNDIF-NLVRDGVLLCKLINVAVPGT---IDERAIN 187
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 67 QEQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 198
+E+ WI+ + N +ED LR+G +L ++ +K+APGSV
Sbjct: 429 EERSFRLWINSLGISTYINNVFED-LRNGWVLLEVIDKIAPGSV 471
Score = 30.7 bits (66), Expect = 0.73
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 145 RDGVILCKLANKLAPGSVKKIQERGTNFQLMENI 246
+DGV+LCKL N PG+ I ER N + + N+
Sbjct: 194 KDGVLLCKLINLAVPGT---IDERAINTKKLLNL 224
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 30.3 bits (65), Expect = 0.96
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 142 LRDGVILCKLANKLAPGSVKKIQE 213
LR+G++LC + N + PG+V K+ E
Sbjct: 57 LRNGLVLCNVLNHVNPGAVPKVVE 80
>11_05_0065 +
18766566-18766576,18767023-18767083,18767170-18767268,
18767346-18767467,18767577-18767673,18767778-18767824,
18768020-18768203,18768349-18768400,18768795-18768985,
18769072-18770020,18770866-18771022,18771134-18771206,
18771292-18771465,18771880-18771993,18772110-18772236,
18772331-18772443,18772614-18772729,18772847-18773000
Length = 946
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 232 LMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLC-LYALGRITQ 378
L E ++ + + Y + ++ + Q LF R++ Q+ LC LY + +++Q
Sbjct: 693 LCERLRHEELTVSVYNIFKQILDQQTALFFNRHVDQIILCCLYGVAKVSQ 742
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 226 FQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 363
FQ EN++ F A ++ G+P F+ +DL + +V C+ AL
Sbjct: 140 FQYFENVRNFLVAAQEIGLP---CFEASDLEQGGKSARVVNCVLAL 182
>06_02_0055 + 10986228-10986388,10986717-10986899,10987013-10987652
Length = 327
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 115 LPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGT 222
+P Y +RD I KLA++L PG + +ER +
Sbjct: 122 VPREEYSSQIRDQPIWPKLADELVPGRTSERRERAS 157
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 229 QLMENIQRFQAAIKKYGVPEEEIFQTAD 312
Q M+ + F AA+ K G+PE+E+ +TAD
Sbjct: 435 QEMQEEKNF-AAVCKLGIPEQELAETAD 461
>11_08_0033 + 27820563-27823482,27823593-27823996
Length = 1107
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 303 LEYFFFWYS-VFLDCRLEPLNVLHELEVGSSLLDF 202
+E+ + +S V L C L+P NVL + E+ + L DF
Sbjct: 912 MEHLHYHHSEVVLHCDLKPSNVLFDEEMTAHLADF 946
>11_01_0519 + 4066776-4066892,4067042-4067099,4067322-4067608,
4067706-4067822,4067898-4067958,4068042-4068133,
4068547-4068632,4068926-4068975,4069077-4069117,
4069222-4069392,4069875-4069942,4070088-4070148,
4070471-4070757,4072008-4072172,4072759-4072760,
4072829-4073139,4073600-4073787,4075231-4075482,
4076035-4076114,4076199-4076399,4076959-4077014,
4077137-4077328
Length = 980
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -1
Query: 384 MFLSNSSQSVQT*CYLGNVTPLKKIGGLEYFFFWYSVFLDCR-LEPLNVLHELEVGSSLL 208
+FL N+ Q T CYL LK + G F DC+ P + E+ L
Sbjct: 910 LFLKNTQQGAATTCYLALHPELKDVSG--------KYFADCKEATPRPAARDAELAKRLW 961
Query: 207 DF 202
DF
Sbjct: 962 DF 963
>09_02_0494 + 9875324-9875932
Length = 202
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 105 GRAATKWRIRGCAKGRCDPLQIGQQISSWISEKNP-RERNQ 224
GRA +W ++GRC P + ++ W ++P ER Q
Sbjct: 142 GRACGEWGHPSFSRGRCRPCERRRRAHPWGRRRSPSSERRQ 182
>01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,
7080866-7083890,7084253-7084596
Length = 1251
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 282 YSVFLDCRLEPLNVLHELEVGSSLLDF 202
Y V L C L+P NVL + E+ + + DF
Sbjct: 1084 YEVVLHCDLKPSNVLFDEEMTAHVADF 1110
>11_08_0029 - 27783907-27784310,27784418-27786616,27786751-27787333
Length = 1061
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 303 LEYFFFWYS-VFLDCRLEPLNVLHELEVGSSLLDF 202
+E+ + +S V L C L+P NVL + E+ + + DF
Sbjct: 866 MEHLHYHHSEVVLHCDLKPSNVLFDEEITAHVADF 900
>10_05_0069 +
8782535-8782920,8783016-8783281,8783588-8783869,
8784559-8784632,8787230-8787461,8788067-8788077
Length = 416
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 306 GLEYFFFWYSVFLDCRLEPLNVLHELEVGSSL 211
GL F F Y+ L CR + V +L +GS L
Sbjct: 116 GLSAFLFLYTSILGCRPGKVTVSSDLPMGSGL 147
>07_01_0234 + 1715338-1718233,1718351-1718760
Length = 1101
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 282 YSVFLDCRLEPLNVLHELEVGSSLLDF 202
Y V L C L+P NVL + E+ + + DF
Sbjct: 912 YEVVLHCDLKPSNVLFDDEMTAHVADF 938
>02_04_0291 + 21637700-21638164
Length = 154
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 88 WISDVLGEPLPNGAYEDVLRDGVILCKLANKLAP 189
W E +P Y +RD +I KLA+KL P
Sbjct: 12 WFRGEWDELVPREEYSSQIRDQLIRPKLADKLVP 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,763,504
Number of Sequences: 37544
Number of extensions: 348021
Number of successful extensions: 1002
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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