Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30291
(416 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 31 0.013
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.029
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 27 0.27
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 27 0.36
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 25 0.83
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 24 1.9
AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A... 23 3.4
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 23 4.5
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 23 4.5
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 5.9
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 5.9
>AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein
protein.
Length = 814
Score = 31.5 bits (68), Expect = 0.013
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 3 YEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRI 179
YE L VKRS++ + +S R NE+TV+ +S I + L I+ +Y K+LRI
Sbjct: 348 YEVILVVKRSMDIKESDSWWRRNEITVVMSLISFFFPMIFEALGII--EYYHPRKQLRI 404
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.029
Identities = 24/96 (25%), Positives = 45/96 (46%)
Frame = +3
Query: 39 QQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELK 218
++ E+ QT + EL S+ + E EL I +DE+T+ ++ RY +TE
Sbjct: 464 EEKEKLQTELIELKRAVDESKSALSIAESELKI--CQHDEVTERRKLESLRYSYEETE-- 519
Query: 219 HTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEE 326
+ L E++ R+ +E E++ +L+E
Sbjct: 520 ---KDLEEKRARLQTLEEALPVTRTELETAKQKLQE 552
Score = 26.6 bits (56), Expect = 0.36
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 183 DERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRI 362
DE Y ++ E + + EE ++ ++ + K+S E +KN + +V+AN +R
Sbjct: 340 DETYDALKAERVEKEKLVKEEIKQYDELVSAKESKESTLKNSLDKFAKVQANMRATNERR 399
Query: 363 ISKLE 377
LE
Sbjct: 400 KKTLE 404
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 27.1 bits (57), Expect = 0.27
Identities = 20/90 (22%), Positives = 39/90 (43%)
Frame = +3
Query: 36 EQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTEL 215
EQQY + + + + L +SKAK ++AI DEI + + +
Sbjct: 258 EQQYNQFKQEMEAILARKKELETSKAK---QVAIGQRSTDEINSLEEKTERLEDTISKQK 314
Query: 216 KHTVEHLHEEQERIVKIEAVKKSLEIEVKN 305
+ ++ L + ER +++ K L V++
Sbjct: 315 RELMDALAKADERKTELDEAKVMLAAFVQD 344
Score = 26.2 bits (55), Expect = 0.48
Identities = 23/109 (21%), Positives = 42/109 (38%)
Frame = +3
Query: 6 EQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIAD 185
++ L + + + + + + ELT VN+ K K E+ + + + A
Sbjct: 660 QEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEKVKFERSCRTIIEQLLDQQRRKVAAL 719
Query: 186 ERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 332
ERY E + + +ER EA + LE ++ L VE
Sbjct: 720 ERYAAASREHDLLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANVE 768
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 26.6 bits (56), Expect = 0.36
Identities = 20/112 (17%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = +3
Query: 6 EQALRVKR---SVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELR 176
++A R+K S +Q+ + R E + K+ +E+A + E+ E+
Sbjct: 243 KEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVEAEMS 302
Query: 177 IADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 332
+ + + ++ HT + L + + + ++ + ++K + L+EVE
Sbjct: 303 KRHPMFIKAKEKVAHTQKKLDGALKTLEQARRADEAHQADIKKLVDELQEVE 354
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 25.4 bits (53), Expect = 0.83
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +3
Query: 84 INVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVK 263
+ V++ K +Q + + +E+ DER Q + +L +H+ + Q+ ++
Sbjct: 703 LQVSMDELKRHTQQRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLT 762
Query: 264 IEAVKKSL-----EIEVKNISVRLEEVEANAIVGGKRIISKLEGG 383
E + L E E + ++R EE+E + + I++KL+ G
Sbjct: 763 NEQQLQQLAGVVFEGETEETTLR-EELEHS-----RTILAKLQKG 801
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 24.2 bits (50), Expect = 1.9
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 99 SSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLH-EEQER 254
+ SK + EQEL + E KEL RY+ ++ + + L+ +EQ+R
Sbjct: 320 NKSKERAEQELERLKITIAEKEKELEQVRPRYEAMRRKEEECSRELNLKEQKR 372
>AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A2
protein.
Length = 496
Score = 23.4 bits (48), Expect = 3.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 165 KELRIADERYQRVQTELKHTVEHLHEEQE 251
KEL A+ER +R Q +L+ E E+ +
Sbjct: 466 KELESAEERREREQQDLELAKEMAEEDDD 494
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.0 bits (47), Expect = 4.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 329 RSQRYCWWQAYHQQARGGGPVP 394
+ Q+ Q HQ GGGP+P
Sbjct: 474 QQQQQSQHQQQHQHQPGGGPLP 495
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.0 bits (47), Expect = 4.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 329 RSQRYCWWQAYHQQARGGGPVP 394
+ Q+ Q HQ GGGP+P
Sbjct: 474 QQQQQSQHQQQHQHQPGGGPLP 495
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 protein.
Length = 961
Score = 22.6 bits (46), Expect = 5.9
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Frame = +3
Query: 72 ELTVINVNLSSSKAKIEQELAIVA---------ADYDEITKELRIADERYQ---RVQTEL 215
E T +L+ S+ K EQ++ A DY+ + +L + R Q + Q +
Sbjct: 851 EATEARSHLADSQVKKEQQITSQALPPHSMHTDCDYEPESHKLLAENYRQQHQQQQQQQQ 910
Query: 216 KHTVEHLHEEQERIVKIEAVKKSLE 290
+ +H HE+Q++ + A ++ LE
Sbjct: 911 QQQQQHEHEQQQQQNSMLATQQRLE 935
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 22.6 bits (46), Expect = 5.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 189 RYQRVQTELKHTVEHLH 239
+Y R+ + HT +HLH
Sbjct: 872 QYNRIASIANHTFDHLH 888
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,986
Number of Sequences: 2352
Number of extensions: 5018
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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