Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30290
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment dom...    29   7.3  
AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment dom...    29   7.3  
BC126212-1|AAI26213.1|  547|Homo sapiens beta-carotene 15,15'-mo...    29   9.7  
BC126210-1|AAI26211.1|  547|Homo sapiens beta-carotene 15,15'-mo...    29   9.7  
AK001592-1|BAA91776.1|  547|Homo sapiens protein ( Homo sapiens ...    29   9.7  
AF294900-1|AAG15380.1|  547|Homo sapiens beta, beta-carotene 15,...    29   9.7  

>BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment domain
            family, member 6 protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 200  EP*IMHQQRGDPEGSQEAYCQEQKIRKEPSPC 295
            +P   H     P+ SQ   CQ Q  + +PSPC
Sbjct: 956  QPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC 987


>AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment domain
            protein 6 protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 200  EP*IMHQQRGDPEGSQEAYCQEQKIRKEPSPC 295
            +P   H     P+ SQ   CQ Q  + +PSPC
Sbjct: 956  QPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC 987


>BC126212-1|AAI26213.1|  547|Homo sapiens beta-carotene
           15,15'-monooxygenase 1 protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -2

Query: 515 GQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLML 363
           G + + +   ++VIFK   +P T + +   +GK P+  +E FC +P R +L
Sbjct: 185 GTSIVEKGKTKYVIFK---IPAT-VPEGKKQGKSPWKHTEVFCSIPSRSLL 231


>BC126210-1|AAI26211.1|  547|Homo sapiens beta-carotene
           15,15'-monooxygenase 1 protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -2

Query: 515 GQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLML 363
           G + + +   ++VIFK   +P T + +   +GK P+  +E FC +P R +L
Sbjct: 185 GTSIVEKGKTKYVIFK---IPAT-VPEGKKQGKSPWKHTEVFCSIPSRSLL 231


>AK001592-1|BAA91776.1|  547|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10730 fis, clone NT2RP3001307. ).
          Length = 547

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -2

Query: 515 GQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLML 363
           G + + +   ++VIFK   +P T + +   +GK P+  +E FC +P R +L
Sbjct: 185 GTSIVEKGKTKYVIFK---IPAT-VPEGKKQGKSPWKHTEVFCSIPSRSLL 231


>AF294900-1|AAG15380.1|  547|Homo sapiens beta, beta-carotene
           15,15'- dioxygenase protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -2

Query: 515 GQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLML 363
           G + + +   ++VIFK   +P T + +   +GK P+  +E FC +P R +L
Sbjct: 185 GTSIVEKGKTKYVIFK---IPAT-VPEGKKQGKSPWKHTEVFCSIPSRSLL 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,526,448
Number of Sequences: 237096
Number of extensions: 1642013
Number of successful extensions: 7318
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7318
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)