Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30289
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0376 - 20754386-20755392,20755683-20756320,20756433-207566... 80 9e-16
01_06_1550 + 38191957-38192054,38193084-38193284,38193456-381940... 79 2e-15
03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555 78 4e-15
03_02_0800 + 11337206-11337532,11337634-11337957,11338060-113381... 68 4e-12
04_04_0516 + 25833801-25834046,25834412-25834532,25834636-258348... 65 4e-11
02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345 62 2e-10
02_05_0007 + 24918163-24918420,24919360-24919410,24919411-249194... 62 3e-10
07_03_1743 - 29167078-29167290,29167389-29168159 62 3e-10
10_08_0883 + 21279913-21280235,21281066-21281327,21281998-212821... 54 9e-08
04_04_0739 - 27693768-27694305,27694765-27694912,27694987-276951... 48 6e-06
02_05_1197 - 34908382-34908582,34908664-34908837,34909239-349093... 30 0.96
06_02_0308 + 14124373-14124706,14124888-14124910 28 5.1
01_05_0513 - 22864657-22867899 28 5.1
02_01_0110 + 819022-819264,819996-820761,820846-820920,821276-82... 27 6.8
04_04_0208 - 23605701-23607149 27 8.9
>05_04_0376 -
20754386-20755392,20755683-20756320,20756433-20756627,
20757730-20757795,20757942-20758007,20758402-20758445
Length = 671
Score = 80.2 bits (189), Expect = 9e-16
Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Frame = +3
Query: 69 AWVTLATNDS-YGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDV 245
A+ T+ + S Y GA+ A S+R+AGS V L+ T+S+ R L A +V +
Sbjct: 348 AYATILHSASEYVCGAISAAQSIRQAGSTRDLVILVDDTISDHHRKGLEAAGWKVRVIQR 407
Query: 246 LDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAA 425
+ + A A + ++K W LT Y+K +F+DAD+L+++N D LF E++A
Sbjct: 408 IRNPKAERDAYNEW-----NYSKFRLWQLTDYDKIIFIDADLLILRNVDFLFAMPEITAT 462
Query: 426 PDVGWPDCFNSGVFVFKPSNETFEKLI 506
+ FNSGV V +PSN TF+ L+
Sbjct: 463 GNNA--TLFNSGVMVIEPSNCTFQLLM 487
>01_06_1550 +
38191957-38192054,38193084-38193284,38193456-38194090,
38194398-38195419
Length = 651
Score = 79.4 bits (187), Expect = 2e-15
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Frame = +3
Query: 69 AWVTLATNDS-YGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDV 245
A+ T+ + S Y GA+ A S+R+AGS V L+ T+S R L A +V +
Sbjct: 323 AYATILHSASEYVCGAITAAQSIRQAGSTRDFVILVDETISNHHRKGLEAAGWKVRIIQR 382
Query: 246 LDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAA 425
+ + A A + ++K W LT Y+K +F+DAD+L+++N D LF E++A
Sbjct: 383 IRNPKAERDAYNEW-----NYSKFRLWQLTDYDKIIFIDADLLILRNVDFLFAMPEITAT 437
Query: 426 PDVGWPDCFNSGVFVFKPSNETFEKLI 506
+ FNSGV V +PSN TF+ L+
Sbjct: 438 GNNA--TLFNSGVMVIEPSNCTFQLLM 462
>03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555
Length = 614
Score = 78.2 bits (184), Expect = 4e-15
Identities = 53/143 (37%), Positives = 77/143 (53%)
Frame = +3
Query: 81 LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRD 260
L ++D+Y GA+VLA S+RRAGS V L TVS+ L A + + +
Sbjct: 330 LHSSDTYLCGAIVLAQSIRRAGSTRDLVLLHDHTVSKPALAALVAAGWTPRKIKRIRNPR 389
Query: 261 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 440
A + ++K W LT Y++ VF+DADILV+++ D LF +L+A + G
Sbjct: 390 AERGTYNE-----YNYSKFRLWQLTDYDRVVFVDADILVLRDLDALFGFPQLTAVGNDG- 443
Query: 441 PDCFNSGVFVFKPSNETFEKLIQ 509
FNSGV V +PS TF+ LI+
Sbjct: 444 -SLFNSGVMVIEPSQCTFQSLIR 465
>03_02_0800 +
11337206-11337532,11337634-11337957,11338060-11338194,
11338280-11338519
Length = 341
Score = 68.1 bits (159), Expect = 4e-12
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +3
Query: 60 SNRAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
+ RA+VT LA + Y G + LA LR+ GS YP V + P V E+ R L + V
Sbjct: 21 ATRAYVTFLAGDGDYWKGVVGLAKGLRKVGSAYPLVVAVLPDVPESHRRILISQGCIVRE 80
Query: 237 VD-VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 404
++ V + A+ I ++K+ W +YE+ V+LDADI V N DELFE
Sbjct: 81 IEPVYPPENQTQFAMAYYV---INYSKLRIWEFVEYERMVYLDADIQVFDNIDELFE 134
>04_04_0516 +
25833801-25834046,25834412-25834532,25834636-25834821,
25834918-25834944,25836203-25836351,25836553-25836602,
25837181-25837289,25837395-25837532,25838184-25838463,
25838533-25838656,25838994-25839003
Length = 479
Score = 64.9 bits (151), Expect = 4e-11
Identities = 44/150 (29%), Positives = 80/150 (53%)
Frame = +3
Query: 60 SNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTV 239
+ A+VTL D + LG VL S+R G+ V L++ VS+ R L+A V +
Sbjct: 32 TEEAYVTLLYGDEFVLGVRVLGKSIRDTGTRRDLVVLVSDGVSDYSRKLLQADGWIVSHI 91
Query: 240 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 419
+L + + + G+ +TK+ +N+T Y K V+LDAD +V+++ ++LF+ +
Sbjct: 92 TLLANPNQVR----PKRFWGV-YTKLKIFNMTSYRKVVYLDADTVVVKSIEDLFKCGKFC 146
Query: 420 AAPDVGWPDCFNSGVFVFKPSNETFEKLIQ 509
++ + NSGV V +PS F+ +++
Sbjct: 147 G--NLKHSERMNSGVMVVEPSETVFKDMMR 174
>02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345
Length = 654
Score = 62.5 bits (145), Expect = 2e-10
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Frame = +3
Query: 81 LATNDSYGLGALVLAHSLRRAG-SVYPA------VALITPTVSEAMRDRLRAVFSEVVTV 239
L + + Y GALV A S+R A S P+ VAL+ T+S R L A +V +
Sbjct: 321 LHSEELYACGALVAAQSIRMASASGAPSEPERDMVALVDETISARHRGALEAAGWKVRAI 380
Query: 240 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 419
+ + AA A + ++K W+LT+Y++ VFLDAD+LV + LF E+S
Sbjct: 381 RRVRNPRAAADAYNEW-----NYSKFWLWSLTEYDRVVFLDADLLVQRPMSPLFAMPEVS 435
Query: 420 AAPDVGWPDCFNSGVFVFKPSNETFEKLI 506
A + G FNSGV V +P T L+
Sbjct: 436 ATANHG--TLFNSGVMVVEPCGCTLRLLM 462
>02_05_0007 +
24918163-24918420,24919360-24919410,24919411-24919480,
24919645-24919830,24920127-24920275,24921310-24921417,
24921501-24921638,24922574-24922853,24922924-24923047,
24923197-24923312,24923612-24923619
Length = 495
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/148 (29%), Positives = 75/148 (50%)
Frame = +3
Query: 63 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 242
+ A+VTL D + LG VL S+R + V L++ VSE R L A V +
Sbjct: 37 DEAYVTLLYGDEFVLGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKHIT 96
Query: 243 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSA 422
+L A+ ++ +TK+ +N+T Y+K +LDAD +V+++ +++F + A
Sbjct: 97 LL-----ANPNQVRPTRFWGVYTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCGKFCA 151
Query: 423 APDVGWPDCFNSGVFVFKPSNETFEKLI 506
++ + NSGV V +PS F ++
Sbjct: 152 --NLKHSERMNSGVMVVEPSETLFNDMM 177
>07_03_1743 - 29167078-29167290,29167389-29168159
Length = 327
Score = 61.7 bits (143), Expect = 3e-10
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +3
Query: 66 RAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL---RAVFSEVV 233
RA+VT LA + Y G + LA LRR S YP V + P V R +L V E+
Sbjct: 18 RAYVTFLAGDGDYWKGVVGLAKGLRRVRSAYPLVVAVLPDVPGEHRRKLVEQGCVVREIQ 77
Query: 234 TVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREE 413
V +S+ +A I ++K+ W +YE+ V+LDADI V N D LF+ ++
Sbjct: 78 PVYPPESQTQFAMAYYV-----INYSKLRIWEFVEYERMVYLDADIQVFDNIDHLFDLDK 132
>10_08_0883 +
21279913-21280235,21281066-21281327,21281998-21282199,
21282289-21282436,21282541-21283084
Length = 492
Score = 53.6 bits (123), Expect = 9e-08
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Frame = +3
Query: 117 VLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSE----VVTVDVLDSRDAAHLALLQ 284
V+ SL R G+ V + + V D +RA+ E VV V+ + + ++L +
Sbjct: 78 VMMRSLARIGADADRVLIASADVPA---DWVRAMREEDGMRVVLVENMKNPYESNLGGIN 134
Query: 285 RPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGV 464
R +T K++ W L YE+ V +D+D + +Q DELF+ + A P F++G+
Sbjct: 135 R-RFKLTLNKLYAWTLVDYERVVMIDSDNIFLQKTDELFQCGQFCAV--FINPCYFHTGL 191
Query: 465 FVFKPSNETFEKLI 506
FV +PS + F+ ++
Sbjct: 192 FVLQPSMDVFKGML 205
>04_04_0739 -
27693768-27694305,27694765-27694912,27694987-27695188,
27695802-27695864,27695865-27696120,27697811-27697953
Length = 449
Score = 47.6 bits (108), Expect = 6e-06
Identities = 36/120 (30%), Positives = 59/120 (49%)
Frame = +3
Query: 117 VLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQRPEL 296
V+ SL R GS V + + V L+ +VV+V+ L + R +L
Sbjct: 18 VMMRSLGRLGSDADRVVIASVDVPPRWVQALKDDGVKVVSVENLKNPYEKQGNFNMRFKL 77
Query: 297 GITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFK 476
T K++ W+L Y++ V LD+D + +QN DELF+ + A P F++G+FV +
Sbjct: 78 --TLNKLYAWSLVSYDRVVMLDSDNIFLQNTDELFQCGQFCAV--FINPCIFHTGLFVLQ 133
>02_05_1197 -
34908382-34908582,34908664-34908837,34909239-34909337,
34909444-34909644,34910229-34910336,34910498-34910882,
34911132-34911584,34911868-34912094,34912211-34912270
Length = 635
Score = 30.3 bits (65), Expect = 0.96
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 21 LELSHETTPGFIMSNR-AWVTLATNDSYGLGALVLAHSLRRAGSV-YPAVALITPTV-SE 191
+ L+H TTP + NR + +A+N LGA H LR A +V P ++L T SE
Sbjct: 299 VHLTHLTTPESVFHNRLGFAAVASNP---LGAAASGHLLRAASAVASPLLSLFASTFRSE 355
Query: 192 AMR-DRL 209
A R D+L
Sbjct: 356 ANRLDKL 362
>06_02_0308 + 14124373-14124706,14124888-14124910
Length = 118
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 111 ALVLAHSLRRAGSVYPAVALITPTVSEA-MRDRLRAVF 221
+LVL L+ G + VA + P +SEA +R R +A+F
Sbjct: 25 SLVLLQQLQLLGVLVVVVAGVAPGISEAQVRSRFKAIF 62
>01_05_0513 - 22864657-22867899
Length = 1080
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 150 PSRRGGANGPAPELPSRRSRLWPELP 73
P GG N P PE+P R P++P
Sbjct: 172 PEGGGGDNAPPPEVPPEAPRDLPDIP 197
>02_01_0110 +
819022-819264,819996-820761,820846-820920,821276-821445,
821644-821742,821835-822134,822211-822318,822443-822514,
822580-822666,822887-822958,823063-823152,823795-823902,
824015-824083,824177-824242,824395-824418
Length = 782
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +3
Query: 162 VALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDA----AHLALLQRPELGI 302
V+L PT+ ++ D L++ + +D+ +D A+++LLQ+PEL +
Sbjct: 255 VSLRKPTIHQSDDDELKSKLNLKPNIDLKMRKDMDEDLANISLLQKPELSV 305
>04_04_0208 - 23605701-23607149
Length = 482
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -1
Query: 438 IPRREQPIALHARR--VHRNFGSPIYRHLGIR 349
+P E +A+ ARR +H NF Y HLG R
Sbjct: 222 VPLPECAVAIRARRTQLHHNFRMVCYDHLGPR 253
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,598,684
Number of Sequences: 37544
Number of extensions: 270655
Number of successful extensions: 875
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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