Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30289
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein. 210 2e-54
U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein. 210 2e-54
U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein. 210 2e-54
CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein. 210 2e-54
BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein. 210 2e-54
AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein. 210 2e-54
AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein. 210 2e-54
BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein. 208 9e-54
U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein. 198 9e-51
DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein. 198 9e-51
AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein. 198 9e-51
U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein. 196 5e-50
BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein. 196 5e-50
U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein. 187 2e-47
U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein. 149 6e-36
U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon prot... 128 9e-30
AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens ... 31 2.4
BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific pept... 31 3.2
AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific prot... 31 3.2
AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific prot... 31 3.2
AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific prot... 31 3.2
S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subuni... 30 5.5
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 30 5.5
BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for IM... 30 5.5
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 30 5.5
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 30 5.5
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 30 5.5
>X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein.
Length = 279
Score = 210 bits (514), Expect = 2e-54
Identities = 95/153 (62%), Positives = 121/153 (79%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
VDVLDS D+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REEL
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREEL 120
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFV++PS ET+ +L+ A
Sbjct: 121 SAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLA 153
>U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 210 bits (514), Expect = 2e-54
Identities = 95/153 (62%), Positives = 121/153 (79%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
VDVLDS D+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REEL
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREEL 120
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFV++PS ET+ +L+ A
Sbjct: 121 SAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLA 153
>U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 210 bits (514), Expect = 2e-54
Identities = 95/153 (62%), Positives = 121/153 (79%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
VDVLDS D+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REEL
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREEL 120
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFV++PS ET+ +L+ A
Sbjct: 121 SAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLA 153
>CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein.
Length = 333
Score = 210 bits (514), Expect = 2e-54
Identities = 95/153 (62%), Positives = 121/153 (79%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
VDVLDS D+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REEL
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREEL 120
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFV++PS ET+ +L+ A
Sbjct: 121 SAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLA 153
>BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein.
Length = 333
Score = 210 bits (514), Expect = 2e-54
Identities = 95/153 (62%), Positives = 121/153 (79%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
VDVLDS D+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REEL
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREEL 120
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFV++PS ET+ +L+ A
Sbjct: 121 SAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLA 153
>AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein.
Length = 350
Score = 210 bits (514), Expect = 2e-54
Identities = 95/153 (62%), Positives = 121/153 (79%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
VDVLDS D+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REEL
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREEL 120
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFV++PS ET+ +L+ A
Sbjct: 121 SAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLA 153
>AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein.
Length = 333
Score = 210 bits (514), Expect = 2e-54
Identities = 95/153 (62%), Positives = 121/153 (79%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
VDVLDS D+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REEL
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREEL 120
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFV++PS ET+ +L+ A
Sbjct: 121 SAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLA 153
>BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein.
Length = 331
Score = 208 bits (508), Expect = 9e-54
Identities = 94/151 (62%), Positives = 119/151 (78%)
Frame = +3
Query: 63 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 242
++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+ VD
Sbjct: 1 DQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVD 60
Query: 243 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSA 422
VLDS D+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSA
Sbjct: 61 VLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSA 120
Query: 423 APDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
APD GWPDCFNSGVFV++PS ET+ +L+ A
Sbjct: 121 APDPGWPDCFNSGVFVYQPSVETYNQLLHLA 151
>U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein.
Length = 501
Score = 198 bits (483), Expect = 9e-51
Identities = 96/162 (59%), Positives = 115/162 (70%)
Frame = +3
Query: 30 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 209
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 210 RAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNC 389
VF EV+ V+++DS D HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 144
Query: 390 DELFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
DELF+R E SAAPD GWPDCFNSGVFVF+PS T + L+Q A
Sbjct: 145 DELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHA 186
>DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein.
Length = 430
Score = 198 bits (483), Expect = 9e-51
Identities = 96/162 (59%), Positives = 115/162 (70%)
Frame = +3
Query: 30 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 209
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 210 RAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNC 389
VF EV+ V+++DS D HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 144
Query: 390 DELFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
DELF+R E SAAPD GWPDCFNSGVFVF+PS T + L+Q A
Sbjct: 145 DELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHA 186
>AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein.
Length = 501
Score = 198 bits (483), Expect = 9e-51
Identities = 96/162 (59%), Positives = 115/162 (70%)
Frame = +3
Query: 30 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 209
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 210 RAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNC 389
VF EV+ V+++DS D HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 144
Query: 390 DELFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
DELF+R E SAAPD GWPDCFNSGVFVF+PS T + L+Q A
Sbjct: 145 DELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHA 186
>U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein.
Length = 469
Score = 196 bits (477), Expect = 5e-50
Identities = 94/153 (61%), Positives = 112/153 (73%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
V+++DS D HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E
Sbjct: 63 VNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEF 122
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFVF+PS T + L+Q A
Sbjct: 123 SAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHA 155
>BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein.
Length = 470
Score = 196 bits (477), Expect = 5e-50
Identities = 94/153 (61%), Positives = 112/153 (73%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
V+++DS D HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E
Sbjct: 63 VNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEF 122
Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
SAAPD GWPDCFNSGVFVF+PS T + L+Q A
Sbjct: 123 SAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHA 155
>U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein.
Length = 461
Score = 187 bits (455), Expect = 2e-47
Identities = 90/144 (62%), Positives = 103/144 (71%)
Frame = +3
Query: 84 ATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDA 263
ATND Y GALVL SLRR V LITP VS +R L VF EV+ V+++DS D
Sbjct: 3 ATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDSADY 62
Query: 264 AHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWP 443
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWP
Sbjct: 63 IHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWP 122
Query: 444 DCFNSGVFVFKPSNETFEKLIQFA 515
DCFNSGVFVF+PS T + L+Q A
Sbjct: 123 DCFNSGVFVFQPSLHTHKLLLQHA 146
>U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein.
Length = 342
Score = 149 bits (361), Expect = 6e-36
Identities = 65/97 (67%), Positives = 77/97 (79%)
Frame = +3
Query: 225 EVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 404
EV+ V+++DS D HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+
Sbjct: 2 EVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFD 61
Query: 405 REELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
R E SAAPD GWPDCFNSGVFVF+PS T + L+Q A
Sbjct: 62 RGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHA 98
>U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon
protein.
Length = 298
Score = 128 bits (310), Expect = 9e-30
Identities = 55/78 (70%), Positives = 63/78 (80%)
Frame = +3
Query: 282 QRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSG 461
+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPDCFNSG
Sbjct: 1 KRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSG 60
Query: 462 VFVFKPSNETFEKLIQFA 515
VFVF+PS T + L+Q A
Sbjct: 61 VFVFQPSLHTHKLLLQHA 78
>AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ44103 fis, clone TESTI4044084. ).
Length = 161
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 182 GRCDECYGRVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCS 39
G C + G+ +GA R QHQ+ + Q PC H AGCS
Sbjct: 22 GHCPQFQGKKQMSGARAR-AQHQAHSSQESTQCQVSPCPAWHPRAGCS 68
>BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific
peptidase 1 protein.
Length = 785
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 176
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 176
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific
protease 1 variant protein.
Length = 586
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 176
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 363 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 402
>AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 57 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 176
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subunit
protein.
Length = 980
Score = 29.9 bits (64), Expect = 5.5
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 89 KRLLRLGSSGAGPFAPPRRLGVPCRST 169
+R+ L +SGAG APPR LGVP +T
Sbjct: 937 RRIQALRASGAG--APPRGLGVPAEAT 961
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 150 PSRRGGANGPAPELPSRRSRLWPELPML 67
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for
IMAGE:3913418) protein.
Length = 941
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 150 PSRRGGANGPAPELPSRRSRLWPELPML 67
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 150 PSRRGGANGPAPELPSRRSRLWPELPML 67
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 150 PSRRGGANGPAPELPSRRSRLWPELPML 67
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 150 PSRRGGANGPAPELPSRRSRLWPELPML 67
PS+R P+ E+PS+R P+LP+L
Sbjct: 34 PSKRALPRDPSSEVPSKRKNSAPQLPLL 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,154,291
Number of Sequences: 237096
Number of extensions: 1450458
Number of successful extensions: 3850
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3850
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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