Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30289
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121654-1|AAM51981.1|  333|Drosophila melanogaster RE02181p pro...   243   1e-64
AE013599-3158|AAF46696.3|  333|Drosophila melanogaster CG9480-PB...   243   1e-64
AY122071-1|AAM52583.1|  312|Drosophila melanogaster AT15262p pro...    28   6.5  
AL121806-3|CAB58079.1|  312|Drosophila melanogaster EG:BACR42I17...    28   6.5  
AE014298-154|AAF45586.1|  312|Drosophila melanogaster CG11378-PA...    28   6.5  

>AY121654-1|AAM51981.1|  333|Drosophila melanogaster RE02181p
           protein.
          Length = 333

 Score =  243 bits (595), Expect = 1e-64
 Identities = 110/153 (71%), Positives = 130/153 (84%)
 Frame = +3

Query: 57  MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
           MS  AWVTL TND+Y LGALVLAHSL+RA + +    L+TP VS+AMRDRL+ V++ V  
Sbjct: 1   MSKFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQE 60

Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
           V+VLDS+DAA+LALL RPELG+TFTK+HCW L Q+EKCVFLDAD LV+QNCDELFEREEL
Sbjct: 61  VNVLDSQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREEL 120

Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
           SAAPDV WPDCFNSGVFVFKPS +TF ++ +FA
Sbjct: 121 SAAPDVSWPDCFNSGVFVFKPSVDTFAQITEFA 153


>AE013599-3158|AAF46696.3|  333|Drosophila melanogaster CG9480-PB,
           isoform B protein.
          Length = 333

 Score =  243 bits (595), Expect = 1e-64
 Identities = 110/153 (71%), Positives = 130/153 (84%)
 Frame = +3

Query: 57  MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 236
           MS  AWVTL TND+Y LGALVLAHSL+RA + +    L+TP VS+AMRDRL+ V++ V  
Sbjct: 1   MSKFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQE 60

Query: 237 VDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREEL 416
           V+VLDS+DAA+LALL RPELG+TFTK+HCW L Q+EKCVFLDAD LV+QNCDELFEREEL
Sbjct: 61  VNVLDSQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREEL 120

Query: 417 SAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
           SAAPDV WPDCFNSGVFVFKPS +TF ++ +FA
Sbjct: 121 SAAPDVSWPDCFNSGVFVFKPSVDTFAQITEFA 153


>AY122071-1|AAM52583.1|  312|Drosophila melanogaster AT15262p
           protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 105 LGALVLAHSLRRAGS-VYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALL 281
           +GA VL  +  R G  +   +A   P   EA ++ +    ++     +   +D     L+
Sbjct: 160 IGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQYI--PKDGQVPDLM 217

Query: 282 QRPELGITFTKIHCWNLTQYEKCV 353
            RPEL   F+  HC +L ++E CV
Sbjct: 218 SRPEL--LFSPTHCVDLQRFEACV 239


>AL121806-3|CAB58079.1|  312|Drosophila melanogaster EG:BACR42I17.2
           protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 105 LGALVLAHSLRRAGS-VYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALL 281
           +GA VL  +  R G  +   +A   P   EA ++ +    ++     +   +D     L+
Sbjct: 160 IGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQYI--PKDGQVPDLM 217

Query: 282 QRPELGITFTKIHCWNLTQYEKCV 353
            RPEL   F+  HC +L ++E CV
Sbjct: 218 SRPEL--LFSPTHCVDLQRFEACV 239


>AE014298-154|AAF45586.1|  312|Drosophila melanogaster CG11378-PA
           protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 105 LGALVLAHSLRRAGS-VYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALL 281
           +GA VL  +  R G  +   +A   P   EA ++ +    ++     +   +D     L+
Sbjct: 160 IGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQYI--PKDGQVPDLM 217

Query: 282 QRPELGITFTKIHCWNLTQYEKCV 353
            RPEL   F+  HC +L ++E CV
Sbjct: 218 SRPEL--LFSPTHCVDLQRFEACV 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,587,371
Number of Sequences: 53049
Number of extensions: 453609
Number of successful extensions: 1324
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)