Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30289
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified vi... 196 6e-51
U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified vi... 196 6e-51
U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified vi... 196 6e-51
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 180 5e-46
AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical... 99 2e-21
Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical p... 29 2.6
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 28 4.6
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 28 4.6
AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical ... 28 4.6
U27312-4|AAA68248.1| 405|Caenorhabditis elegans Hypothetical pr... 27 8.0
>U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform b
protein.
Length = 284
Score = 196 bits (479), Expect = 6e-51
Identities = 88/151 (58%), Positives = 113/151 (74%)
Frame = +3
Query: 63 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 242
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 243 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSA 422
V +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + SA
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFSA 121
Query: 423 APDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
A D+GWPD FNSGVFV+ P+NET+ +L+ FA
Sbjct: 122 ASDIGWPDSFNSGVFVYVPNNETYRQLVDFA 152
>U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform c
protein.
Length = 303
Score = 196 bits (479), Expect = 6e-51
Identities = 88/151 (58%), Positives = 113/151 (74%)
Frame = +3
Query: 63 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 242
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 243 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSA 422
V +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + SA
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFSA 121
Query: 423 APDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
A D+GWPD FNSGVFV+ P+NET+ +L+ FA
Sbjct: 122 ASDIGWPDSFNSGVFVYVPNNETYRQLVDFA 152
>U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform a
protein.
Length = 429
Score = 196 bits (479), Expect = 6e-51
Identities = 88/151 (58%), Positives = 113/151 (74%)
Frame = +3
Query: 63 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 242
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 243 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSA 422
V +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + SA
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFSA 121
Query: 423 APDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
A D+GWPD FNSGVFV+ P+NET+ +L+ FA
Sbjct: 122 ASDIGWPDSFNSGVFVYVPNNETYRQLVDFA 152
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 180 bits (438), Expect = 5e-46
Identities = 81/149 (54%), Positives = 105/149 (70%)
Frame = +3
Query: 69 AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 248
AW+TLATND Y GAL L +SL +G+ LIT +S ++R++L F EV VD+
Sbjct: 4 AWITLATNDRYAQGALTLLNSLHASGTTRRIHCLITNEISNSVREKLVNKFDEVTVVDIF 63
Query: 249 DSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAP 428
+S D+ +L+L+ RP+LG+TFTK HCW LTQY K VFLDAD ++I+N DELFER + SAA
Sbjct: 64 NSNDSENLSLIGRPDLGVTFTKFHCWRLTQYSKAVFLDADTMIIRNSDELFERPDFSAAA 123
Query: 429 DVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
D+GWPD FNSGVFVF PS + L+ A
Sbjct: 124 DIGWPDMFNSGVFVFTPSLTVYRALLSLA 152
>AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical
protein Y73F8A.31 protein.
Length = 173
Score = 99.1 bits (236), Expect = 2e-21
Identities = 53/116 (45%), Positives = 70/116 (60%)
Frame = +3
Query: 168 LITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEK 347
LIT +S ++R+ L F EV VD +S D+ +L+L+ RP+L
Sbjct: 35 LITNEISNSVREELENKFDEVNIVDFFNSNDSENLSLIGRPDLA---------------- 78
Query: 348 CVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFA 515
VFLDAD ++I+NCDELFER + SAA D+GWPD FNSGVFVF PS + L+ A
Sbjct: 79 -VFLDADTMIIRNCDELFERPDFSAAADIGWPDMFNSGVFVFTPSLTVYRALLALA 133
>Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 58.0 bits (134), Expect = 4e-09
Identities = 41/147 (27%), Positives = 74/147 (50%)
Frame = +3
Query: 69 AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 248
A+V++ +++ + + A VLA+ L++ S P + ++T ++E + L+ + V V
Sbjct: 25 AFVSVLSSNDFLIPAKVLAYRLKKLNSSIPYIIIVTQDITEYSINELK---QQGVIVRND 81
Query: 249 DSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAP 428
D ++ + + +TKI W +T+++ V LD DIL ++ LFE A+
Sbjct: 82 TKIDTPYIKTHKARKY--QYTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS- 138
Query: 429 DVGWPDCFNSGVFVFKPSNETFEKLIQ 509
D FNSGVFV K + F + Q
Sbjct: 139 -FRHSDMFNSGVFVLKTNETVFHDMEQ 164
>Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 58.0 bits (134), Expect = 4e-09
Identities = 41/147 (27%), Positives = 74/147 (50%)
Frame = +3
Query: 69 AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 248
A+V++ +++ + + A VLA+ L++ S P + ++T ++E + L+ + V V
Sbjct: 25 AFVSVLSSNDFLIPAKVLAYRLKKLNSSIPYIIIVTQDITEYSINELK---QQGVIVRND 81
Query: 249 DSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAP 428
D ++ + + +TKI W +T+++ V LD DIL ++ LFE A+
Sbjct: 82 TKIDTPYIKTHKARKY--QYTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS- 138
Query: 429 DVGWPDCFNSGVFVFKPSNETFEKLIQ 509
D FNSGVFV K + F + Q
Sbjct: 139 -FRHSDMFNSGVFVLKTNETVFHDMEQ 164
>Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical
protein D1086.10a protein.
Length = 177
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 385 IAMNSSSVKSYRLLPTWDGPTVSTPAFLSSNLQTKPSRN 501
+ ++++ S+ PT PTV T A ++ N ++ PS++
Sbjct: 10 LVLSATPTLSFTTAPTGTSPTVDTSAVIAPNPESSPSQS 48
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 158 RVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCSLV 33
RV RAG A R + +Q +V Q++PC + C ++
Sbjct: 615 RVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQGDQQRACEII 656
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 158 RVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCSLV 33
RV RAG A R + +Q +V Q++PC + C ++
Sbjct: 552 RVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQGDQQRACEII 593
>AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical
protein Y47H9C.1 protein.
Length = 377
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 451 STPAFLSSNLQTKPSRN 501
ST FL+SN+QTKPSR+
Sbjct: 142 STFLFLNSNMQTKPSRS 158
>U27312-4|AAA68248.1| 405|Caenorhabditis elegans Hypothetical
protein F26A1.8 protein.
Length = 405
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 48 GFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSV 152
GF+ + AW +A LG V +L +AGS+
Sbjct: 348 GFLCTKPAWQLIAVGGCIILGGFVFFSALSKAGSI 382
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,248,823
Number of Sequences: 27780
Number of extensions: 217704
Number of successful extensions: 684
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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