Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30289
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g60450.1 68414.m06805 galactinol synthase, putative similar t... 74 5e-17
At3g18660.1 68416.m02370 glycogenin glucosyltransferase (glycoge... 80 8e-16
At1g77130.1 68414.m08985 glycogenin glucosyltransferase (glycoge... 79 2e-15
At5g18480.1 68418.m02179 glycogenin glucosyltransferase (glycoge... 77 5e-15
At1g08990.1 68414.m01003 glycogenin glucosyltransferase (glycoge... 70 1e-12
At2g47180.1 68415.m05892 galactinol synthase, putative similar t... 60 2e-12
At1g60470.1 68414.m06808 galactinol synthase, putative similar t... 68 3e-12
At4g33330.1 68417.m04740 glycogenin glucosyltransferase (glycoge... 67 8e-12
At1g56600.1 68414.m06509 galactinol synthase, putative similar t... 60 9e-12
At4g26250.1 68417.m03778 galactinol synthase, putative similar t... 66 1e-11
At1g54940.1 68414.m06274 glycogenin glucosyltransferase (glycoge... 65 3e-11
At5g23790.1 68418.m02793 galactinol synthase, putative similar t... 59 3e-11
At5g30500.1 68418.m03751 galactinol synthase, putative similar t... 62 2e-10
At1g09350.1 68414.m01046 galactinol synthase, putative contains ... 56 1e-08
At4g16600.1 68417.m02511 glycogenin glucosyltransferase (glycoge... 52 2e-07
At2g35710.2 68415.m04379 glycogenin glucosyltransferase (glycoge... 52 3e-07
At2g35710.1 68415.m04380 glycogenin glucosyltransferase (glycoge... 52 3e-07
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 28 3.2
At2g42980.1 68415.m05332 aspartyl protease family protein contai... 28 3.2
At5g15760.1 68418.m01843 plastid-specific 30S ribosomal protein ... 27 9.9
>At1g60450.1 68414.m06805 galactinol synthase, putative similar to
galactinol synthase GI:5608497 from [Ajuga reptans];
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 332
Score = 74.1 bits (174), Expect(2) = 5e-17
Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Frame = +3
Query: 66 RAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA---VFSEVV 233
RA+VT LA N Y G + LA LR+ S YP V + P V E R+ LR+ + E+
Sbjct: 20 RAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAMLPDVPEEHREILRSQGCIVREIE 79
Query: 234 TVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREE 413
V DS+DA R I ++K+ WN +Y K ++LDADI V N D+LF+ ++
Sbjct: 80 PVHPPDSQDA-----YARAYYIINYSKLRIWNFEEYNKMIYLDADIQVFGNIDDLFDMQD 134
Score = 30.3 bits (65), Expect(2) = 5e-17
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 411 ELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQ 509
E+ +AP + FN+G+FVF+P+ T+E L+Q
Sbjct: 172 EMESAPPSPY---FNAGMFVFEPNPLTYESLLQ 201
>At3g18660.1 68416.m02370 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-1 from
Homo sapiens [SP|P46976], Oryctolagus cuniculus
[SP|P13280]
Length = 655
Score = 80.2 bits (189), Expect = 8e-16
Identities = 47/137 (34%), Positives = 74/137 (54%)
Frame = +3
Query: 99 YGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLAL 278
Y GA+ A S+R++GS V L+ +S R L A ++ T+ + + A A
Sbjct: 330 YVCGAIAAAQSIRQSGSTRDLVILVDDNISGYHRSGLEAAGWQIRTIQRIRNPKAEKDAY 389
Query: 279 LQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNS 458
+ ++K W LT Y+K +F+DAD+L+++N D LF E+SA + G FNS
Sbjct: 390 NEW-----NYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFSMPEISATGNNG--TLFNS 442
Query: 459 GVFVFKPSNETFEKLIQ 509
GV V +P N TF+ L++
Sbjct: 443 GVMVIEPCNCTFQLLME 459
>At1g77130.1 68414.m08985 glycogenin glucosyltransferase
(glycogenin)-related contains similarity to glycogenin-1
from Mus musculus [SP|Q9R062], Rattus norvegicus
[SP|O08730], Homo sapiens [SP|P46976]
Length = 618
Score = 78.6 bits (185), Expect = 2e-15
Identities = 47/136 (34%), Positives = 74/136 (54%)
Frame = +3
Query: 99 YGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLAL 278
Y GA+ A S+R +GS V L+ T+SE + L A ++ + + +A A
Sbjct: 297 YVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQRIRNPNAVPNAY 356
Query: 279 LQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNS 458
+ ++K W LT+Y K +F+DAD+L+++N D LFE E+SA + FNS
Sbjct: 357 NEW-----NYSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFPEISATGNNA--TLFNS 409
Query: 459 GVFVFKPSNETFEKLI 506
G+ V +PSN TF+ L+
Sbjct: 410 GLMVVEPSNSTFQLLM 425
>At5g18480.1 68418.m02179 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-1 from
Mus musculus [SP|Q9R062], Rattus norvegicus [SP|O08730],
Homo sapiens [SP|P46976]; contains Pfam profile PF01501:
Glycosyl transferase family 8
Length = 537
Score = 77.4 bits (182), Expect = 5e-15
Identities = 49/150 (32%), Positives = 83/150 (55%)
Frame = +3
Query: 60 SNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTV 239
S A+VTL D + LG VL S+R GS VAL++ VS+ + L+A +V +
Sbjct: 29 SKVAYVTLLYGDEFLLGVRVLGKSIRDTGSTKDMVALVSDGVSDYSKKLLKADGWKVEKI 88
Query: 240 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 419
+L + + H G+ +TK+ +N+T Y+K V+LDAD +V++N ++LF+ +
Sbjct: 89 SLLANPNQVHPTRFW----GV-YTKLKIFNMTDYKKVVYLDADTIVVKNIEDLFKCSKFC 143
Query: 420 AAPDVGWPDCFNSGVFVFKPSNETFEKLIQ 509
A ++ + NSGV V +PS F +++
Sbjct: 144 A--NLKHSERLNSGVMVVEPSEALFNDMMR 171
>At1g08990.1 68414.m01003 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-1 from
Mus musculus [SP|Q9R062], Rattus norvegicus [SP|O08730],
Oryctolagus cuniculus [SP|P13280]
Length = 424
Score = 69.7 bits (163), Expect = 1e-12
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Frame = +3
Query: 39 TTPGFIMSNRAWVTLA-TNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA 215
T F A+VTL +++ Y GA+ LA S+R++GS + L +++ L
Sbjct: 127 TLSSFTAQRVAYVTLLHSSEVYVCGAIALAQSIRQSGSTKDMILLHDDSITNISLIGLSL 186
Query: 216 VFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDE 395
++ V+ + S + +R ++K+ W +T Y+K VF+DAD ++++N D
Sbjct: 187 AGWKLRRVERIRSPFSK-----KRSYNEWNYSKLRVWQVTDYDKLVFIDADFIIVKNIDY 241
Query: 396 LFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLI 506
LF +LSAA + FNSGV V +PS FE L+
Sbjct: 242 LFSYPQLSAAGNN--KVLFNSGVMVLEPSACLFEDLM 276
>At2g47180.1 68415.m05892 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]
Length = 344
Score = 60.5 bits (140), Expect(2) = 2e-12
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +3
Query: 27 LSHETTPGFIMSNRAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRD 203
++ + P S+RA+VT LA N Y G + LA LR+ S YP V + P V E R
Sbjct: 17 ITKPSLPSVQDSDRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAMLPDVPEEHRR 76
Query: 204 RLRAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQ 383
L V + ++ + I ++K+ W +Y K ++LD DI V +
Sbjct: 77 IL--VDQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWKFVEYSKMIYLDGDIQVYE 134
Query: 384 NCDELFE 404
N D LF+
Sbjct: 135 NIDHLFD 141
Score = 28.7 bits (61), Expect(2) = 2e-12
Identities = 14/46 (30%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 378 IQNCDELFEREELSAAPDVGWPDC--FNSGVFVFKPSNETFEKLIQ 509
I+ C + ++ + A ++G P FN+G+F+++P+ ET+E L++
Sbjct: 167 IRYCQQCPDKVQWPKA-ELGEPPALYFNAGMFLYEPNLETYEDLLR 211
>At1g60470.1 68414.m06808 galactinol synthase, putative similar to
galactinol synthase GI:5608497 from [Ajuga reptans]
Length = 334
Score = 68.1 bits (159), Expect = 3e-12
Identities = 52/147 (35%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Frame = +3
Query: 24 ELSHETTPGFIMSNRAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMR 200
E +H+ P RA+VT LA N Y G + LA LR+ S YP V + P V E R
Sbjct: 14 EKAHQAPP-----RRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAMLPDVPEEHR 68
Query: 201 DRLRA---VFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADI 371
+ LR+ V E+ V D++ +A + ++K+ WN +Y K ++LDADI
Sbjct: 69 EILRSQGCVVREIEPVYPPDNQVEFAMAYYV-----LNYSKLRIWNFEEYSKMIYLDADI 123
Query: 372 LVIQNCDELFEREELSAAPDVGWPDCF 452
V N D LF +LS A DCF
Sbjct: 124 QVFDNIDHLF---DLSDAYFYAVMDCF 147
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 381 QNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQ 509
Q C E E +P P FN+G+FVF+PS T+E L+Q
Sbjct: 164 QQCPEKVTWPEDMESPPP--PLYFNAGMFVFEPSPLTYESLLQ 204
>At4g33330.1 68417.m04740 glycogenin glucosyltransferase
(glycogenin)-related similar to glycogenin
glucosyltransferase (glycogenin-1) (EC 2.4.1.186) from
Homo sapiens [SP|P46976], Mus musculus [SP|Q9R062],
Oryctolagus cuniculus [GI:165513]; contains Pfam profile
PF01501: Glycosyl transferase family 8
Length = 593
Score = 66.9 bits (156), Expect = 8e-12
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Frame = +3
Query: 69 AWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDV 245
A+VT L +++SY GA+ LA SL + + + L ++S L A ++ +
Sbjct: 299 AYVTVLHSSESYVCGAITLAQSLLQTNTKRDLILLHDDSISITKLRALAAAGWKLRRIIR 358
Query: 246 LDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAA 425
+ + A + + ++K W LT Y+K +F+DADI+V++N D LF ++SA
Sbjct: 359 IRNPLAEKDSYNE-----YNYSKFRLWQLTDYDKVIFIDADIIVLRNLDLLFHFPQMSAT 413
Query: 426 PDVGWPDCFNSGVFVFKPSNETFEKLI 506
+ W +NSG+ V +PSN TF ++
Sbjct: 414 GNDVW--IYNSGIMVIEPSNCTFTTIM 438
>At1g56600.1 68414.m06509 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]
Length = 335
Score = 59.7 bits (138), Expect(2) = 9e-12
Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = +3
Query: 33 HETTPGFIMSNRAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 209
H T G RA+VT LA Y G + LA LR+A S YP V + P V E R +L
Sbjct: 14 HSATGG---EKRAYVTFLAGTGDYVKGVVGLAKGLRKAKSKYPLVVAVLPDVPEDHRKQL 70
Query: 210 RAVFSEVVTVD-VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQN 386
V ++ V + A+ I ++K+ W +Y K ++LD DI V N
Sbjct: 71 VDQGCVVKEIEPVYPPENQTEFAMAYYV---INYSKLRIWEFVEYNKMIYLDGDIQVFDN 127
Query: 387 CDELFE 404
D LF+
Sbjct: 128 IDHLFD 133
Score = 27.1 bits (57), Expect(2) = 9e-12
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 381 QNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQ 509
Q C + E P P FN+G+FV++P+ T+ L++
Sbjct: 163 QQCPDKVTWPEAKLGPKP--PLYFNAGMFVYEPNLSTYHNLLE 203
>At4g26250.1 68417.m03778 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 [Ajuga reptans]
GI:5608497; contains Pfam profile: PF01501 glycosyl
transferase family 8
Length = 336
Score = 66.5 bits (155), Expect = 1e-11
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Frame = +3
Query: 66 RAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA---VFSEVV 233
RA+VT LA N Y +G + LA LR+ S YP V I P V E R L A + E+
Sbjct: 25 RAYVTFLAGNKDYWMGVVGLAKGLRKVKSAYPLVVAILPDVPEEHRQILLAQGCIIREIE 84
Query: 234 TVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 404
V +++ +A I ++K+ W +YEK ++LD DI V N D LF+
Sbjct: 85 PVYPPENKTGYSMAYYV-----INYSKLRIWEFVEYEKMIYLDGDIQVFSNIDHLFD 136
>At1g54940.1 68414.m06274 glycogenin glucosyltransferase
(glycogenin)-related contains similarity to glycogenin-1
from Mus musculus [SP|Q9R062], Rattus norvegicus
[SP|O08730], Homo sapiens [SP|P46976]
Length = 557
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Frame = +3
Query: 69 AWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDV 245
A+VT L ++++Y GA+ LA S+R++GS + L T++ L A + +D
Sbjct: 272 AYVTVLHSSEAYVCGAIALAQSIRQSGSHKDMILLHDHTITNKSLIGLSAAGWNLRLIDR 331
Query: 246 LDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAA 425
+ S + + + ++K+ W +T Y+K VF+DAD ++++ D LF +LSA+
Sbjct: 332 IRSPFSQKDSYNEW-----NYSKLRVWQVTDYDKLVFIDADFIILKKLDHLFYYPQLSAS 386
Query: 426 PDVGWPDCFNSGVFVFKPSNETFEKLIQ 509
+ FNSG+ V +PS F+ L++
Sbjct: 387 GND--KVLFNSGIMVLEPSACMFKDLME 412
>At5g23790.1 68418.m02793 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]; contains Pfam profile: PF01501 glycosyl
transferase family 8
Length = 333
Score = 58.8 bits (136), Expect(2) = 3e-11
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +3
Query: 66 RAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 242
RA+VT LA N Y + + LA LR+ S YP V P V E R L V + D
Sbjct: 22 RAYVTFLAGNKDYWMLVVGLAKGLRKVKSAYPLVVATLPDVPEEHRQIL--VDQGCIIRD 79
Query: 243 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 404
+ + I ++K+ W +YEK ++LD DI V +N D LF+
Sbjct: 80 IEPVYPPENTTGYSMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFKNIDHLFD 133
Score = 25.8 bits (54), Expect(2) = 3e-11
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 408 EELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQ 509
E L A P P FN+G+ VF P+ T+E L++
Sbjct: 174 ESLGAPP----PVYFNAGMLVFGPNLVTYEDLLR 203
>At5g30500.1 68418.m03751 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]
Length = 328
Score = 62.1 bits (144), Expect = 2e-10
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +3
Query: 66 RAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 242
RA+VT LA N Y +G + LA LR+ + YP V + P V + R L A + ++
Sbjct: 25 RAYVTFLAGNQDYWMGVVGLAKGLRKVKAAYPLVVAMLPDVPKEHRQILVAQGCIIREIE 84
Query: 243 -VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 404
V + A A+ I ++K+ W +YEK ++LD DI V N D LF+
Sbjct: 85 PVYPPENQAGYAMAYYV---INYSKLRIWEFVEYEKMIYLDGDIQVFSNIDHLFD 136
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 441 PDCFNSGVFVFKPSNETFEKLIQ 509
P FN+G+ VF+P+ T+E L+Q
Sbjct: 184 PLYFNAGMLVFEPNLLTYEDLLQ 206
>At1g09350.1 68414.m01046 galactinol synthase, putative contains
Pfam profile: PF01501 glycosyl transferase family 8
Length = 334
Score = 56.4 bits (130), Expect = 1e-08
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +3
Query: 66 RAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLR---AVFSEVV 233
RA+VT LA Y G + LA LR+ S YP V + P V R +L V E+
Sbjct: 16 RAYVTFLAGTGDYVKGVVGLAKGLRKTKSKYPLVVAVLPDVPADHRRQLLDQGCVIKEIQ 75
Query: 234 TVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 404
V D++ +A + ++K+ W +Y K ++LD DI V +N D LF+
Sbjct: 76 PVYPPDNQTQFAMAYYV-----LNYSKLRIWKFVEYSKLIYLDGDIQVFENIDHLFD 127
>At4g16600.1 68417.m02511 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-1 from
Rattus norvegicus [SP|O08730], Homo sapiens [GI:496895],
Mus musculus [SP|Q9R062]
Length = 442
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = +3
Query: 300 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKP 479
++ K++ W+L+ Y++ V LD D L ++N DELF+ + A P F++G+FV +P
Sbjct: 141 LSLNKLYAWSLSDYDRVVMLDVDNLFLKNTDELFQCGQFCAV--FINPCIFHTGLFVLQP 198
Query: 480 SNETFEKLI 506
S E F ++
Sbjct: 199 SMEVFRDML 207
>At2g35710.2 68415.m04379 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-2 from
Homo sapiens [SP|O15488]
Length = 389
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +3
Query: 300 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKP 479
+T K++ W L+ Y++ V LDAD L ++ DELF+ A P F++G+FV +P
Sbjct: 37 LTLNKLYAWALSDYDRVVMLDADNLFLKKADELFQCGRFCAV--FINPCIFHTGLFVLQP 94
Query: 480 SNETFEKLI 506
S E F+ ++
Sbjct: 95 SVEVFKDML 103
>At2g35710.1 68415.m04380 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-2 from
Homo sapiens [SP|O15488]
Length = 497
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +3
Query: 300 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKP 479
+T K++ W L+ Y++ V LDAD L ++ DELF+ A P F++G+FV +P
Sbjct: 145 LTLNKLYAWALSDYDRVVMLDADNLFLKKADELFQCGRFCAV--FINPCIFHTGLFVLQP 202
Query: 480 SNETFEKLI 506
S E F+ ++
Sbjct: 203 SVEVFKDML 211
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 28.3 bits (60), Expect = 3.2
Identities = 21/95 (22%), Positives = 39/95 (41%)
Frame = +3
Query: 96 SYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLA 275
S G G ++ + PA I ++E + + V+ + +D + H
Sbjct: 402 SDGAGGTIIDSGTTLSYFAEPAYEFIKNKIAEKAKGKY-PVYRDFPILDPCFNVSGIHN- 459
Query: 276 LLQRPELGITFTKIHCWNLTQYEKCVFLDADILVI 380
+Q PELGI F WN ++L+ D++ +
Sbjct: 460 -VQLPELGIAFADGAVWNFPTENSFIWLNEDLVCL 493
>At2g42980.1 68415.m05332 aspartyl protease family protein contains
pfam profile: PF00026 eukaryotic aspartyl protease
Length = 527
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/75 (22%), Positives = 31/75 (41%)
Frame = +3
Query: 156 PAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLT 335
PA +I +E M++ +F + +D + + PELGI F WN
Sbjct: 412 PAYEIIKNKFAEKMKENY-PIFRDFPVLDPCFNVSGIEENNIHLPELGIAFVDGTVWNFP 470
Query: 336 QYEKCVFLDADILVI 380
++L D++ +
Sbjct: 471 AENSFIWLSEDLVCL 485
>At5g15760.1 68418.m01843 plastid-specific 30S ribosomal protein 3,
putative / PSRP-3, putative similar to SP|P82412
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor (PSRP-3) {Spinacia oleracea}; contains Pfam
profile PF04839: Plastid and cyanobacterial ribosomal
protein (PSRP-3 / Ycf65)
Length = 183
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 447 CFNSGVFVFKPSNETF 494
C N G+F + PSN TF
Sbjct: 60 CINPGIFAYPPSNLTF 75
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,655,791
Number of Sequences: 28952
Number of extensions: 204137
Number of successful extensions: 565
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -