Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30287
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical pr... 30 0.85
AF101316-5|AAC69233.2| 99|Caenorhabditis elegans Hypothetical ... 29 2.0
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 28 4.6
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 28 4.6
Z66500-1|CAA91303.1| 325|Caenorhabditis elegans Hypothetical pr... 27 6.0
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 27 6.0
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 27 6.0
Z81055-9|CAB02898.3| 562|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical p... 27 8.0
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical p... 27 8.0
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 27 8.0
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 8.0
>Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical
protein F26D2.7 protein.
Length = 341
Score = 30.3 bits (65), Expect = 0.85
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 246 KRLIVKNKRFERSQVLAFVVEWIDENKELEWE--STFSTSRQHESFRHVTELFRHIKRYF 419
+ +I KN FE S V F++ +EN ++W+ S ++ F++ +F +K YF
Sbjct: 163 REVIRKNFDFEISSVARFIMMPYNENNTIQWKALSLLISAGILICFQYFIFVFFGLKIYF 222
Query: 420 SFVEHLHNFS 449
+ L +FS
Sbjct: 223 NMKLRLKSFS 232
>AF101316-5|AAC69233.2| 99|Caenorhabditis elegans Hypothetical
protein F52F10.1 protein.
Length = 99
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 1 LFFLNHNSYT*SFYIFFGYYGCKIHQ 78
++F NHNS + F++ F C+ HQ
Sbjct: 21 IYFFNHNSVSFQFFLVFQKLTCRSHQ 46
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 285 QVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHI--KRYFSFVEHLHNFSHWH 458
+ LAF + IDE EL+ + +S+S + V E R + + Y F+++ N S
Sbjct: 176 KTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSISA 235
Query: 459 GVFFKYDKFIRIADNLVLT 515
F + I+ AD LV T
Sbjct: 236 ANFSGEETDIQHADILVST 254
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 261 KNKRFERSQVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVE 431
K + E S V+ V I+ +KE+ S F + +F H TE++R++ Y E
Sbjct: 47 KPQETELSSVMKTTV--INTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYE 101
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 261 KNKRFERSQVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVE 431
K + E S V+ V I+ +KE+ S F + +F H TE++R++ Y E
Sbjct: 47 KPQETELSSVMKTTV--INTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYE 101
>Z66500-1|CAA91303.1| 325|Caenorhabditis elegans Hypothetical
protein T05C12.1 protein.
Length = 325
Score = 27.5 bits (58), Expect = 6.0
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +3
Query: 288 VLAFVVEWIDENKELEWE 341
+LA+ V+++D+N E EW+
Sbjct: 304 ILAYCVKFVDDNAEFEWD 321
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Frame = -2
Query: 461 SVPMTEIMKMLDEG----KVPFDMSEEFCYMP-----KRLMLPRGTEGG 342
++P TE++ L K+PF S E Y P +RL LP G E G
Sbjct: 729 TLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPSGVEIG 777
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Frame = -2
Query: 461 SVPMTEIMKMLDEG----KVPFDMSEEFCYMP-----KRLMLPRGTEGG 342
++P TE++ L K+PF S E Y P +RL LP G E G
Sbjct: 729 TLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPSGVEIG 777
>Z81055-9|CAB02898.3| 562|Caenorhabditis elegans Hypothetical
protein F01G10.10 protein.
Length = 562
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 108 IRLCVIRRKIEFVREPFTLVVNENILEIHVRNLE*CINNGAI 233
I L ++ + ++RE V+NE IL++ + N+ I NG +
Sbjct: 39 IYLRIMPNGLAYLREVGMKVINEQILKLQLPNIREPIENGEV 80
>Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical
protein F10B5.7 protein.
Length = 1780
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 175 SFTTRVNGSLTNSIFLRMTHSLMLFQKI 92
SFT+R+ G L + +FL + LF KI
Sbjct: 277 SFTSRITGMLHDQVFLEVPKMHTLFTKI 304
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 212 MHQQRGDPEGSQEAYCQEQKIRKEPSP 292
M+Q +P+G ++Y Q+Q + +P P
Sbjct: 2949 MNQGSSNPQGGMQSYQQQQPVLGQPGP 2975
>Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical
protein F10B5.7 protein.
Length = 1780
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 175 SFTTRVNGSLTNSIFLRMTHSLMLFQKI 92
SFT+R+ G L + +FL + LF KI
Sbjct: 277 SFTSRITGMLHDQVFLEVPKMHTLFTKI 304
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +3
Query: 318 ENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVEHLHNFSHWHGV 464
E +E+ E S S HE + + H ++S H S HG+
Sbjct: 1304 ELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSSFYHQESDEHGL 1352
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +3
Query: 318 ENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVEHLHNFSHWHGV 464
E +E+ E S S HE + + H ++S H S HG+
Sbjct: 1304 ELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSSFYHQESDEHGL 1352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,084,332
Number of Sequences: 27780
Number of extensions: 271023
Number of successful extensions: 753
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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