Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30286
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   221   3e-60
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   134   6e-34
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   132   2e-33
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.2  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  221 bits (540), Expect = 3e-60
 Identities = 90/107 (84%), Positives = 96/107 (89%)
 Frame = +3

Query: 3   WLXNNPEFLEAFLYWIDEILQSHNDVYFXTMTXVIQWVQNPRTVTEXKNFEPWREKCSVE 182
           WL NNPEFL+AFLYW+DEIL +HNDVYF TMT VIQW+QNPRT+TE KNFEPWREKC VE
Sbjct: 428 WLKNNPEFLDAFLYWVDEILANHNDVYFVTMTQVIQWIQNPRTITESKNFEPWREKCVVE 487

Query: 183 GNPACWVPHSCKLTSKEVPGETINLQTCXRCPVNYPWXNDPTGDGHY 323
           GNP CWVPHSCKLTSKEVPGETINLQTC RCP NYPW NDPTGDG +
Sbjct: 488 GNPHCWVPHSCKLTSKEVPGETINLQTCVRCPNNYPWVNDPTGDGFF 534


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  134 bits (323), Expect = 6e-34
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = +3

Query: 3   WLXNNPEFLEAFLYWIDEILQSHNDVYFXTMTXVIQWVQNPRTVTEXKNFEPWREKCSVE 182
           WL +  EF E  + +I+E+LQ  NDVYF T   VIQW+QNP  +   ++F+ W+EKC ++
Sbjct: 420 WLKSKKEFKEELIKFIEEMLQ-RNDVYFVTNLQVIQWMQNPTELNGLRDFQEWKEKCDIK 478

Query: 183 GNPACWVPHSCKLTSKEVPGETINLQTCXRCPVNYPWXNDPTGDG 317
           G P C +P+SC LT++E+PGET+ L TC  CP NYPW  DPTGDG
Sbjct: 479 GQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWILDPTGDG 523


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  132 bits (319), Expect = 2e-33
 Identities = 54/105 (51%), Positives = 74/105 (70%)
 Frame = +3

Query: 3   WLXNNPEFLEAFLYWIDEILQSHNDVYFXTMTXVIQWVQNPRTVTEXKNFEPWREKCSVE 182
           WL +  EF E  + +I+E+LQ  NDVYF T   VIQW+QNP  +   ++F+ W+EKC ++
Sbjct: 427 WLKSKKEFKEELIKFIEEMLQ-RNDVYFVTNLQVIQWMQNPTELNGLRDFQEWKEKCDIK 485

Query: 183 GNPACWVPHSCKLTSKEVPGETINLQTCXRCPVNYPWXNDPTGDG 317
           G P C +P+SC LT++E+PGET+ L TC  CP NYPW  +PTGDG
Sbjct: 486 GQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWILEPTGDG 530


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 172  APSKETLHAGYLIPASS 222
            +PSK  + AGY +PA S
Sbjct: 2486 SPSKAVMDAGYDVPALS 2502


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 339 RSWLLNSGHRPWGRL 295
           R W     HRPW +L
Sbjct: 526 RPWQTVYNHRPWQQL 540


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,624
Number of Sequences: 336
Number of extensions: 2281
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)