Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30286
         (502 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.)                46   2e-05
SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08)       43   1e-04
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.6  
SB_46989| Best HMM Match : Pox_A32 (HMM E-Value=0.023)                 27   6.6  
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)               27   8.7  

>SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 530

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +3

Query: 102 VIQWVQNPRTVTEXKNFEPWREKCSVEGNPACWVPHSCKLTSKEVPGETINLQTCXRCPV 281
           VI+W++NP+ V     F  W   C     P C  P+ C  T+     +   + TC  CP 
Sbjct: 466 VIEWMKNPQDVNGANGFPAW--DCLTRPKPRCTTPNVCHYTTP----QDFYMPTCSDCPK 519

Query: 282 NYPWXNDPTGD 314
           ++P   +P G+
Sbjct: 520 HFPSPTNPDGE 530


>SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08)
          Length = 893

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 66  SHNDVYFXTMTXVIQWVQNPRTVTEXKNFEPWREKCSVEGNPACW 200
           S  DVYF T++  I+W++ P  + + K F PW  +C     PA W
Sbjct: 818 SQGDVYFVTVSQAIEWIKTPTPLEKIKTFAPW--QCDKPAPPAPW 860


>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1615

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 21/76 (27%), Positives = 31/76 (40%)
 Frame = +1

Query: 148  TSSRGEKSAPSKETLHAGYLIPASSLQRKFPEKPSIYKLV*DAQSTTPG*TTPRAMATIK 327
            +S R E        L  G ++  +S +   PE P    +  D  STTP   TP A    +
Sbjct: 1517 SSERAEALDSYHCKLCTGQVVNLTSTESPLPESPDSVTV--DVDSTTPNEHTPSASPPRR 1574

Query: 328  EP*SRAPRAXLVDIDL 375
            E  S +     + +DL
Sbjct: 1575 ESASGSEEGQAMCVDL 1590


>SB_46989| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
          Length = 719

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 194 CRVSFDGALFSPRLEVLGFSHGTWVLYPLDH 102
           C  + D A  + +   L  +HG W   PLDH
Sbjct: 319 CSKAGDKATSNAKENALNAAHGAWYTIPLDH 349


>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
          Length = 1724

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 193  AGFPSTEHFSLHGSKFLXSVTVRGFCTHWITXVM 92
            AG P+T HF LHG+  + +    G  T  +T +M
Sbjct: 1132 AGPPNTSHFGLHGASTISTTLTPGQST-TLTIIM 1164


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,966,470
Number of Sequences: 59808
Number of extensions: 301224
Number of successful extensions: 715
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)