Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30285
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF022972-3|AAC48235.2|  526|Caenorhabditis elegans Udp-glucurono...    27   8.0  

>Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical
           protein R10D12.2 protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
 Frame = -2

Query: 323 KLDAKPTASAVEATLIQYYAYNKNIYEYNI------LTIILGELFDELKTF 189
           K+ A+     V A LI+YY   KN+ E  I      LT++LG +F   K +
Sbjct: 332 KIVAQEHYLGVSAALIEYYKTEKNMEEMEIAVRFADLTLLLGPIFVSFKAY 382


>Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical
           protein C54G4.2 protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
 Frame = -2

Query: 506 PDKKPKVVTENGVQEIVGLPENPAQVRLIKPPFVIENGVVFIVDNDIYTI--FANGTSEK 333
           PD+K  V+TE+GV  +   PE  A V   +    IE+G  +I   + YT     +G  E+
Sbjct: 216 PDRKEPVMTEDGV--MTRYPELLAAV--AEDGLKIEDGKQWIGLVEDYTTGKMDDGIIEE 271

Query: 332 TDFKLDAKPTASAVEATLIQYYAYNK-NIYEYNILTIILGELFDEL----KTFLEEKAED 168
           +  +L+   T +A++    +++  N  N Y  + L  +  E  D      +T   E+   
Sbjct: 272 SRDQLNPYDTMAALQDRSEKFFRMNSVNYYTMSNLLTLSKEAIDRFAAQEQTTAAERRRK 331

Query: 167 IQSIATRSRSG 135
            +++ T   +G
Sbjct: 332 EEALKTSKENG 342


>AF022972-3|AAC48235.2|  526|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein40 protein.
          Length = 526

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 403 MTNGGLISLT*AGFSGRPTISC 468
           MT+GGL S+    + G+PTI C
Sbjct: 371 MTHGGLGSVNEVSYFGKPTIMC 392


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,217,874
Number of Sequences: 27780
Number of extensions: 226768
Number of successful extensions: 620
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)