Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30281
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 358 2e-99
SB_56| Best HMM Match : Actin (HMM E-Value=0) 358 2e-99
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 358 2e-99
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 357 3e-99
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 270 6e-73
SB_54| Best HMM Match : Actin (HMM E-Value=0) 198 2e-51
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 2e-50
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 4e-48
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 177 4e-45
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 166 1e-41
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 103 9e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 63 2e-10
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 59 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 1e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 42 3e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.24
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.74
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.3
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 30 1.3
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 3.0
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 5.3
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 27 6.9
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 27 9.2
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 9.2
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 358 bits (880), Expect = 2e-99
Identities = 167/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 41 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 100
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+
Sbjct: 101 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 160
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 161 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 211
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 358 bits (880), Expect = 2e-99
Identities = 167/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 41 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 100
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+
Sbjct: 101 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 160
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 161 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 211
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 358 bits (880), Expect = 2e-99
Identities = 167/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 357 bits (878), Expect = 3e-99
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 270 bits (661), Expect = 6e-73
Identities = 126/132 (95%), Positives = 129/132 (97%), Gaps = 2/132 (1%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGVS
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVS 161
Query: 363 HTVPIYE--GYA 392
HTVPIYE GY+
Sbjct: 162 HTVPIYEERGYS 173
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 198 bits (484), Expect = 2e-51
Identities = 89/128 (69%), Positives = 109/128 (85%)
Frame = +3
Query: 132 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 311
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 312 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 491
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 492 AEREIVRD 515
AE++I+RD
Sbjct: 2249 AEQQIIRD 2256
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 195 bits (476), Expect = 2e-50
Identities = 87/162 (53%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
Frame = +3
Query: 30 KDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 206
KD VGDEA R +L + YP+++ I+ NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 207 PLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 386
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Query: 387 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 512
+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR
Sbjct: 173 FALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVR 214
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 187 bits (456), Expect = 4e-48
Identities = 89/97 (91%), Positives = 94/97 (96%)
Frame = +3
Query: 225 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 404
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 405 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 174
Score = 100 bits (240), Expect = 6e-22
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTF 152
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKI TF
Sbjct: 41 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 177 bits (431), Expect = 4e-45
Identities = 83/90 (92%), Positives = 87/90 (96%)
Frame = +3
Query: 246 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 425
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 426 GRDLTDYLMKILTERGYSFTTTAEREIVRD 515
GRDLTDYLMK++TERGYSFTTTAEREIVRD
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRD 90
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 166 bits (403), Expect = 1e-41
Identities = 71/111 (63%), Positives = 97/111 (87%)
Frame = +3
Query: 180 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 359
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 360 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 512
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVR 236
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 103 bits (247), Expect = 9e-23
Identities = 47/126 (37%), Positives = 79/126 (62%)
Frame = +3
Query: 90 PIEHSIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 269
PI+ +I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 270 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 449
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 450 MKILTE 467
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +3
Query: 291 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 467
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 468 RGYSFTTTAEREIVRD 515
RG++FT+++ +IV D
Sbjct: 827 RGHNFTSSSGWQIVND 842
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 8/70 (11%)
Frame = +3
Query: 285 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 440
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 441 DYLMKILTER 470
++ ++L ER
Sbjct: 100 FFVQQLLRER 109
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +3
Query: 18 GMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 197
G+ D ++GDEA K T K+PI H+I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 327 TGIVLDSGDGVSHTVPI 377
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 41.9 bits (94), Expect = 3e-04
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Frame = +3
Query: 39 YVGDEAQSKRGILTLKY--PIEHSIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 212
++GD+ + + L Y P + + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 213 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVP 374
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 375 IYEGYALPHAILR 413
++ G + A+ R
Sbjct: 373 VFNGKVIKKAVRR 385
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 135 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 314
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 315 SGRTTGIV 338
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -2
Query: 503 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 336
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 335 DTGGTTGGVQ 306
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 81 LKYPIEHSIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 233
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 222 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 338
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 467 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 324
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -2
Query: 242 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 63
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 62 AL 57
++
Sbjct: 214 SV 215
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 367 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 215
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 214 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMILCSMGYFRVRIPLLLWAS 50
L A + T C T +L ++ ++++SQ V +C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQ-VFAVCVVSVARCFASMLLTAS 115
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 427 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 248
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 247 IWVIFSLLALGLR 209
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/94 (21%), Positives = 41/94 (43%)
Frame = +3
Query: 93 IEHSIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 272
++ S+ W+ ++ F + E+ + +A LN NR + +++ E S
Sbjct: 396 VQLSLALVWNRVDIAKSEIFVEGQKWEVEDLNSAMMDALLN---NRVEFVKLLLENGVSM 452
Query: 273 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 374
++ + +L+LY RT D+ + HT P
Sbjct: 453 GQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 410 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 312
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 210 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 338
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 376 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 200
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 199 VSSTGCSSGATRSSL*KVW 143
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -3
Query: 301 STAWMATYMAGELKVSNMIWV---IFSLLALGL 212
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 353 WCLPHRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS 511
WC H+ R PR P G WS PH++ + L H H G S
Sbjct: 352 WCAKHQ---ERSHQQPRQPDQGQSWS-----PHKE-YNVTFLHHRHHPTGQSS 395
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2
Query: 515 VTNDFPLSGGGE-RVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVE 339
V++D + E RV+ G + +G+V+ +DGVG+ D GVGD +G
Sbjct: 88 VSDDGGVGDNAEGRVSDDGGVGDDAIGRVSDDGGVGDDGVGR---VSDNGGVGDDANGRV 144
Query: 338 HDTGG 324
D GG
Sbjct: 145 SDDGG 149
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 361 PTPYPSTKVTLCPTPSSVW 417
PTP+P+T V +P S+W
Sbjct: 1373 PTPFPTTPVPPTTSPPSIW 1391
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,278,963
Number of Sequences: 59808
Number of extensions: 310894
Number of successful extensions: 1065
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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