Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30281
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 357 2e-99
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 357 2e-99
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 357 3e-99
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 357 3e-99
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 357 3e-99
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 357 3e-99
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 357 3e-99
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 357 3e-99
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 357 3e-99
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 351 2e-97
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 348 2e-96
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 223 6e-59
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 194 3e-50
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 152 1e-37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 115 2e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 7e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 97 7e-21
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 97 7e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 91 3e-19
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 1e-06
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 33 0.12
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.37
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 28 4.6
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 6.0
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 27 8.0
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 8.0
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 8.0
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 8.0
AC006747-7|AAF60511.1| 331|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 357 bits (879), Expect = 2e-99
Identities = 167/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 357 bits (879), Expect = 2e-99
Identities = 167/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 357 bits (878), Expect = 3e-99
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 357 bits (878), Expect = 3e-99
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 357 bits (878), Expect = 3e-99
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 357 bits (878), Expect = 3e-99
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 357 bits (878), Expect = 3e-99
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 357 bits (878), Expect = 3e-99
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 28 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 87
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 88 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 147
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 148 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 198
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 357 bits (878), Expect = 3e-99
Identities = 166/171 (97%), Positives = 170/171 (99%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 351 bits (863), Expect = 2e-97
Identities = 163/168 (97%), Positives = 167/168 (99%)
Frame = +3
Query: 12 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEEHPV 191
MVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 192 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 371
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 372 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 168
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 348 bits (855), Expect = 2e-96
Identities = 160/171 (93%), Positives = 168/171 (98%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEE 182
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKIWHHTFYNELR+APEE
Sbjct: 41 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEE 100
Query: 183 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 362
HPVLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+
Sbjct: 101 HPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVT 160
Query: 363 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRD
Sbjct: 161 HTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRD 211
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 223 bits (545), Expect = 6e-59
Identities = 99/170 (58%), Positives = 132/170 (77%), Gaps = 1/170 (0%)
Frame = +3
Query: 9 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTF-YNELRVAPEEH 185
VM G D ++G +A+S RG+ +++YP+EH I+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 186 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 365
PVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTH 165
Query: 366 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 515
VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR+
Sbjct: 166 AVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVRE 215
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 194 bits (473), Expect = 3e-50
Identities = 88/162 (54%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Frame = +3
Query: 30 KDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 206
KD VG+E R +L + YP+++ I+ NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 207 PLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 386
PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEG 172
Query: 387 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 512
+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR
Sbjct: 173 FALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVR 214
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 152 bits (369), Expect = 1e-37
Identities = 73/177 (41%), Positives = 107/177 (60%), Gaps = 9/177 (5%)
Frame = +3
Query: 9 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEEH 185
V G+ D ++GDEA S T+KYPI H I+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 186 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVL 341
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 342 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 512
DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ +
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAK 232
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 115 bits (277), Expect = 2e-26
Identities = 51/126 (40%), Positives = 84/126 (66%)
Frame = +3
Query: 93 IEHSIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 272
++ +I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 273 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 452
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 453 KILTER 470
++L ++
Sbjct: 214 QMLDQQ 219
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 7e-21
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKI 137
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKI
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 7e-21
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKI 137
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKI
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 7e-21
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDMEKI 137
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDMEKI
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 91.5 bits (217), Expect = 3e-19
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +3
Query: 3 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHSIITNWDDM 128
QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH I+TNWDDM
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +3
Query: 159 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 338
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 339 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 509
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 510 R 512
R
Sbjct: 385 R 385
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Frame = +3
Query: 27 QKDSYVGDEAQSKRGILTLKY--PIEHSIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 200
+K +V E + +L Y PIE + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 201 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 368
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 369 VPIYEGYALPHAILRLDLAGRDLTDYL 449
G + +++R+D+ G+ LT+ L
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKL 184
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Frame = +3
Query: 27 QKDSYVGDEAQSKRGILTLKY--PIEHSIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 200
+K +V E + +L Y PIE + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 201 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 368
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 369 VPIYEGYALPHAILRLDLAGRDLTDYL 449
G + +++R+D+ G+ LT+ L
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKL 184
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.12
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = +3
Query: 45 GDEAQSKRGILTLKYPIEHSIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 224
G + K TL + E S+ + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 225 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 377
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 358 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 263
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 503 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 369
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -3
Query: 244 WVIFSLLALGLRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMILCSMGY 86
WVI + L + TGCS + ++C+ +Q+ M L +GY
Sbjct: 349 WVIKMGIIRKLIDDDLKETGCSKDGPYNETIAIFCETVQRVTQVTMALRQLGY 401
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 87 YPIEHSIITN-WDDMEKIWHHTFYNELRVAPEEHP 188
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 87 YPIEHSIITN-WDDMEKIWHHTFYNELRVAPEEHP 188
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 179 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 12
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 179 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 12
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 179 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 12
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 467 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 366
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 467 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 366
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 467 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 366
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
>AC006747-7|AAF60511.1| 331|Caenorhabditis elegans Hypothetical
protein Y39A3A.4 protein.
Length = 331
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -3
Query: 184 CSSGATRSSL*KVWCQIFSMSSQLVMILCSMG 89
CS G + ++ W IF ++ +++LC +G
Sbjct: 127 CSQGPLQHTIIDFWRMIFQERAESILLLCKVG 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,869,824
Number of Sequences: 27780
Number of extensions: 215295
Number of successful extensions: 902
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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