Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30280
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   2.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.9  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   8.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 508 SMSTVEEVQFVWLNSGTLLVMVQMLWVVFFRIC 410
           S+  VE VQ++WL     L+     W+   R C
Sbjct: 112 SLPEVERVQWIWLLIFAYLIPEVGTWIRAVRKC 144


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 508 SMSTVEEVQFVWLNSGTLLVMVQMLWVVFFRIC 410
           S+  VE VQ++WL     L+     W+   R C
Sbjct: 112 SLPEVERVQWIWLLIFAYLIPEVGTWIRAVRKC 144


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 327 SKPRPG*SSRSARKP 283
           SKPRP  +SR+A +P
Sbjct: 256 SKPRPAPASRNAPEP 270


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 206 TPQFTPRHFGHEFTHRDPQASPHNHSRSN 120
           +P  +P  + HE+   +  A+ H H+ S+
Sbjct: 269 SPSASPLAYQHEYNSFNWTANGHGHNTSS 297


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 463 GTLLVMVQMLWVVF 422
           GT++V+V+ +WV F
Sbjct: 25  GTIVVVVRGVWVSF 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,318
Number of Sequences: 336
Number of extensions: 2277
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)