Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30280
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0468 - 22490672-22491697,22496010-22496068,22496160-22496571     32   0.31 
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547...    30   0.96 
03_05_0085 - 20638769-20639150,20640054-20640286                       28   3.9  
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442...    27   6.8  
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971...    27   8.9  

>01_05_0468 - 22490672-22491697,22496010-22496068,22496160-22496571
          Length = 498

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
 Frame = +2

Query: 299 RDDQPGRGLLHPRSRHLREAGSGARERSL*TGQD--EYITNTEEHYPE--HLDHDQERAT 466
           R  Q  R  L  R R L    S AR R+L T  D    +++ E+   E  +L    ER T
Sbjct: 116 RQPQQPRRPLRLRKRDLSPLNSSARPRALPTPDDGLRILSSNEDVVKEAKYLRETNERLT 175

Query: 467 VQPHELDFLHC*HAE 511
            Q  +L   HC H E
Sbjct: 176 RQIEQLHADHCAHVE 190


>04_04_0822 +
           28352941-28353825,28353863-28354016,28354714-28354754,
           28355060-28355310,28355411-28355591,28356138-28356323,
           28356396-28356569,28356992-28357150,28357424-28357501,
           28357612-28357748,28357980-28358044,28358115-28358148,
           28358216-28358372,28359135-28359196,28360041-28360118,
           28360940-28361042
          Length = 914

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +3

Query: 90  DSFDLRHFY*VRS*VIVGRRLRVAVCKLVSEMSRRELRSDRIEYPAPPPSK 242
           D FD+      R     GRRL  AV  L  E    EL  D  ++P P P++
Sbjct: 138 DDFDIPSSRTSRPRRTAGRRLATAVADLSEEDDDLELADDDFDHPDPRPTR 188


>03_05_0085 - 20638769-20639150,20640054-20640286
          Length = 204

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 350 EDDGSEDAVSHDQADHHEVRE 288
           ED G  +A+  + ADHH+V +
Sbjct: 125 EDQGHSEAIQDEDADHHQVND 145


>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
            14847177-14847324,14847998-14848097,14848306-14848384,
            14848527-14848687,14848829-14848908,14849319-14849475,
            14849575-14849723,14849909-14850076,14850426-14850719,
            14851002-14851046,14851213-14851462,14851707-14851835,
            14852799-14853039,14853977-14854642
          Length = 1066

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 20/56 (35%), Positives = 25/56 (44%)
 Frame = +2

Query: 293  ALRDDQPGRGLLHPRSRHLREAGSGARERSL*TGQDEYITNTEEHYPEHLDHDQER 460
            A+ +D  GR   H R RH REA + A ER      D Y    E+   E   H + R
Sbjct: 969  AVAEDNDGR---HHR-RHHREAAAAAEERRRPAAGDYYGEEEEDDESEEEQHFKRR 1020


>03_02_0596 +
           9714022-9714065,9714799-9714868,9714978-9715883,
           9715973-9716146,9716260-9716373,9716975-9717033,
           9717170-9717236,9717305-9717356,9718070-9718488,
           9718786-9718847,9719305-9719374,9719730-9719831,
           9719933-9720063,9720492-9720606,9720792-9720827
          Length = 806

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 150 LRVAVCKLVSEMSRRELRSDRIE 218
           L+V +CKL+ E    ELRS+ +E
Sbjct: 639 LKVELCKLLEEKRSAELRSEELE 661


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,195,034
Number of Sequences: 37544
Number of extensions: 271035
Number of successful extensions: 750
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)