Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30280
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-7|CAE17863.1| 372|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z77667-7|CAB01238.2| 534|Caenorhabditis elegans Hypothetical pr... 37 0.007
Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical pr... 35 0.030
U64600-2|AAK39200.2| 519|Caenorhabditis elegans Twik family of ... 35 0.030
AF083653-1|AAC32864.1| 484|Caenorhabditis elegans putative pota... 35 0.030
AF125442-7|AAD12796.1| 203|Caenorhabditis elegans Hypothetical ... 35 0.040
Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical pr... 34 0.069
L12018-5|AAU87822.1| 557|Caenorhabditis elegans Twik family of ... 34 0.069
Z49889-2|CAD44149.1| 553|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z49889-1|CAA90066.2| 591|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 31 0.37
U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of ... 31 0.49
U39647-6|AAM51529.1| 505|Caenorhabditis elegans Twik family of ... 31 0.49
U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of ... 31 0.49
U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of ... 31 0.49
U39647-3|AAW30673.1| 512|Caenorhabditis elegans Twik family of ... 31 0.49
U39647-2|AAM51530.1| 498|Caenorhabditis elegans Twik family of ... 31 0.49
AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative pota... 31 0.49
AF083649-1|AAC32860.1| 381|Caenorhabditis elegans putative pota... 31 0.49
AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative pota... 31 0.49
AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative pota... 31 0.49
AF083644-1|AAC32855.1| 498|Caenorhabditis elegans putative pota... 31 0.49
AF083643-1|AAC32854.1| 512|Caenorhabditis elegans putative pota... 31 0.49
Z82073-1|CAB04923.1| 444|Caenorhabditis elegans Hypothetical pr... 31 0.65
U64598-7|AAK39218.3| 523|Caenorhabditis elegans Twik family of ... 31 0.65
AY255664-1|AAQ96601.1| 523|Caenorhabditis elegans two-P domain ... 31 0.65
U40424-1|AAA81456.2| 461|Caenorhabditis elegans Twik family of ... 30 0.85
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 0.85
AF083650-1|AAC32861.1| 461|Caenorhabditis elegans potassium cha... 30 0.85
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical ... 28 3.4
Z70780-4|CAD54137.2| 786|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical pr... 27 6.0
>Z22180-7|CAE17863.1| 372|Caenorhabditis elegans Hypothetical
protein K11H3.7 protein.
Length = 372
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +3
Query: 237 SKCAKFLYYTWKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQI 416
SK + + K+ + FSH + +LVV Y +LGAVIF+ +E HE + E VK
Sbjct: 8 SKVTRVVNLVKKIIAFFFSHIGLCALVVGYALLGAVIFKAVEGPHEAEIQELVK----SA 63
Query: 417 RKNTTQSIWTMTKSVPLFNHTNWTSSTVDMLK 512
R+ +W T V + W + +D +K
Sbjct: 64 REKAVDVVWNATFRVNRLDSKQWKKTVLDEVK 95
>Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical
protein F36A2.4 protein.
Length = 618
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEH----EKDHFEQVKMNISQIRKNTTQS 437
K+ + H ++I VV Y ILGA++F+ LE EH +KDH +++ N K+
Sbjct: 10 KMARFLSLHVLLIGSVVLYIILGAIVFQMLEGEHLDALKKDHMAKIEQN----AKDYVDK 65
Query: 438 IWTMTK 455
+W++ K
Sbjct: 66 LWSVAK 71
>Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical
protein W06D12.5 protein.
Length = 631
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +3
Query: 288 FSHFVMISLVVAYCILGAVIFEKLEAEHEK----DHFEQVKMNISQIRKNTTQSI 440
F HF ++ LV+ Y +LGAV+F +E+ HEK DH ++ + ++ +N T+S+
Sbjct: 214 FRHFSVVILVLLYTLLGAVMFWTVESRHEKAKTLDHVNNLEHLLDRLAENITESV 268
>Z77667-7|CAB01238.2| 534|Caenorhabditis elegans Hypothetical
protein M04B2.5 protein.
Length = 534
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 252 FLYYTWKLCSVVFSHFVMISLVVAYCILGAVIFEKLEA--EHEKDHFEQVKMN 404
F ++ + F H M+ LV+ Y +LGA +F +E+ EHE HF + K++
Sbjct: 126 FYWFAHNHKKIGFRHVCMLLLVLLYTLLGAALFFSIESRHEHETMHFHKRKLD 178
>Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical
protein R04F11.4 protein.
Length = 567
Score = 35.1 bits (77), Expect = 0.030
Identities = 12/55 (21%), Positives = 27/55 (49%)
Frame = +3
Query: 294 HFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIWTMTKS 458
HF ++ L + Y ++GA+ F E +E+ + I +++ +W M+ +
Sbjct: 58 HFGLVLLSIGYTLIGALCFHHYEKPYEQQLRNETSRRIGELKNRVMDQLWRMSNN 112
>U64600-2|AAK39200.2| 519|Caenorhabditis elegans Twik family of
potassium channelsprotein 26 protein.
Length = 519
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 294 HFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIWTMTKS 458
H +I+L+V Y LG +FEKLE+ E + ++ + + I T I +T S
Sbjct: 86 HVTLIALLVGYVFLGGFMFEKLESPRELEDLKETIVLMQGIIDEETTDIINVTLS 140
>AF083653-1|AAC32864.1| 484|Caenorhabditis elegans putative
potassium channel subunitn2P26 protein.
Length = 484
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 294 HFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIWTMTKS 458
H +I+L+V Y LG +FEKLE+ E + ++ + + I T I +T S
Sbjct: 51 HVTLIALLVGYVFLGGFMFEKLESPRELEDLKETIVLMQGIIDEETTDIINVTLS 105
>AF125442-7|AAD12796.1| 203|Caenorhabditis elegans Hypothetical
protein H04M03.11 protein.
Length = 203
Score = 34.7 bits (76), Expect = 0.040
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +3
Query: 279 SVVFSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRK 422
S F H+++ ++V C++ V+F K+ E +KDH ++ MNI+Q+ +
Sbjct: 50 SSYFLHYILGGILVVLCLISIVLFIKI-CEMKKDHSDE--MNITQLHE 94
>Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical
protein ZK1067.5 protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.069
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 294 HFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQ---VKMN-ISQIRKNTTQSIWTMTKSV 461
H V+I VAY I GA +F K+E + E D ++ + N I+ + +++ +S+ + +
Sbjct: 134 HLVLIFATVAYIIAGAYLFTKIEHQAELDRYQSYHTIYRNFINNLYQSSNRSVADVENLI 193
Query: 462 PLFNHTNW 485
F N+
Sbjct: 194 DTFTSINF 201
>L12018-5|AAU87822.1| 557|Caenorhabditis elegans Twik family of
potassium channelsprotein 7 protein.
Length = 557
Score = 33.9 bits (74), Expect = 0.069
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKN 425
K +V H ++ L Y ++GA+IF +E HE+ EQ ++ + R+N
Sbjct: 157 KFAKLVLPHVALVLLTCTYTVIGALIFYSVEQPHEQMMKEQ-QLKLIYTRQN 207
>Z49889-2|CAD44149.1| 553|Caenorhabditis elegans Hypothetical
protein T06H11.1b protein.
Length = 553
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 264 TWKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIW 443
T K ++ H +++S+++ Y LGA I LE E + + ++ + N T W
Sbjct: 135 TVKYIKILTPHVILVSVLIGYLCLGAWILMLLETRTELLARSKKLVRLTNLMSNFTAESW 194
Query: 444 TM 449
M
Sbjct: 195 KM 196
>Z49889-1|CAA90066.2| 591|Caenorhabditis elegans Hypothetical
protein T06H11.1a protein.
Length = 591
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 264 TWKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIW 443
T K ++ H +++S+++ Y LGA I LE E + + ++ + N T W
Sbjct: 173 TVKYIKILTPHVILVSVLIGYLCLGAWILMLLETRTELLARSKKLVRLTNLMSNFTAESW 232
Query: 444 TM 449
M
Sbjct: 233 KM 234
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 332 PRSRHLREAGSGARERSL*TGQDEYITNTEEHYPEHLDHDQE 457
P S++ REA G E SL + Q +YI HYP+ D D +
Sbjct: 89 PESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDSDND 130
>U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform e protein.
Length = 544
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 135 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 169
>U39647-6|AAM51529.1| 505|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform a protein.
Length = 505
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 78 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 112
>U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform c protein.
Length = 576
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 135 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 169
>U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform d protein.
Length = 562
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 135 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 169
>U39647-3|AAW30673.1| 512|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform f protein.
Length = 512
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 71 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 105
>U39647-2|AAM51530.1| 498|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform b protein.
Length = 498
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 71 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 105
>AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-1 protein.
Length = 562
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 135 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 169
>AF083649-1|AAC32860.1| 381|Caenorhabditis elegans putative
potassium channel subunitn2P17m3 protein.
Length = 381
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 78 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 112
>AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-3 protein.
Length = 544
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 135 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 169
>AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-2 protein.
Length = 576
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 135 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 169
>AF083644-1|AAC32855.1| 498|Caenorhabditis elegans putative
potassium channel subunitn2P17m1-1 protein.
Length = 498
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 71 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 105
>AF083643-1|AAC32854.1| 512|Caenorhabditis elegans putative
potassium channel subunitn2P17m1-2 protein.
Length = 512
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 KLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 374
KL ++ H + L+++Y +GA +F LEA+HE
Sbjct: 71 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHE 105
>Z82073-1|CAB04923.1| 444|Caenorhabditis elegans Hypothetical
protein W06D12.2 protein.
Length = 444
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 294 HFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNI 407
H V I +++ Y LGA +F EAE+EK + M +
Sbjct: 17 HLVKIGVLIVYSFLGAGLFVLCEAENEKSLKHEDNMRV 54
>U64598-7|AAK39218.3| 523|Caenorhabditis elegans Twik family of
potassium channelsprotein 28 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 285 VFSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIWTMTK 455
+ H ++ L+ Y I GA +F LEA E + I +R IW +T+
Sbjct: 59 ILPHVGLVILLFLYLIAGAFLFRYLEAPKELETRNHELTTILGLRDEFQDHIWNITQ 115
>AY255664-1|AAQ96601.1| 523|Caenorhabditis elegans two-P domain K
channel protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 285 VFSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIWTMTK 455
+ H ++ L+ Y I GA +F LEA E + I +R IW +T+
Sbjct: 59 ILPHVGLVILLFLYLIAGAFLFRYLEAPKELETRNHELTTILGLRDEFQDHIWNITQ 115
>U40424-1|AAA81456.2| 461|Caenorhabditis elegans Twik family of
potassium channelsprotein 18 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 288 FSHFVMISLVVAYCILGAVIFEKLEAEHEKDH-FEQVKMNISQIRK 422
F + + ++VAY +LGA IF +E E+E++ EQ K IR+
Sbjct: 19 FKGLLPLIILVAYTLLGAWIFWMIEGENEREMLIEQQKERDELIRR 64
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 285 VFSHFVMISLVVAYCILGAVIFEKLEA 365
+F HF+MI V AY I GA++ LE+
Sbjct: 23 LFVHFLMIVSVGAYAIFGALVMRSLES 49
>AF083650-1|AAC32861.1| 461|Caenorhabditis elegans potassium
channel subunit n2P18 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 288 FSHFVMISLVVAYCILGAVIFEKLEAEHEKDH-FEQVKMNISQIRK 422
F + + ++VAY +LGA IF +E E+E++ EQ K IR+
Sbjct: 19 FKGLLPLIILVAYTLLGAWIFWMIEGENEREMLIEQQKERDELIRR 64
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 197 FTPRHFGHEFTHRDPQASPHNHSRSNSI 114
F+PRHF H D + PHNH+ NS+
Sbjct: 462 FSPRHFRHG---PDSFSLPHNHANLNSL 486
>Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 234 PSKCAKFLYYTWKLCSVVFSHFVM-ISLVVAYCILGAVIFEKLEAEHEK 377
PSK +F+ + H+++ I L++AY +LG +IF +E +E+
Sbjct: 194 PSKLKRFVSLLQIIYDKSRVHYLVPIILLIAYSVLGGLIFWSIERPNEE 242
>AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 234 PSKCAKFLYYTWKLCSVVFSHFVM-ISLVVAYCILGAVIFEKLEAEHEK 377
PSK +F+ + H+++ I L++AY +LG +IF +E +E+
Sbjct: 194 PSKLKRFVSLLQIIYDKSRVHYLVPIILLIAYSVLGGLIFWSIERPNEE 242
>Z70780-4|CAD54137.2| 786|Caenorhabditis elegans Hypothetical
protein F46B6.5b protein.
Length = 786
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 326 LHPRSRHLREAGSGARERSL*TGQDEYITNTEEHYPEHLDHDQERATVQPHELD 487
L R R +R +G ++ RSL G + E H D ++ER + HE D
Sbjct: 424 LEDRERIIRRSGGRSQSRSLRYGSSPQQSRPVEEQKRHRDTEKERE--RDHESD 475
>Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical
protein ZK1251.8 protein.
Length = 568
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 240 KCAKFLYYTWKLCSVVFSHFVMISLVVAYCILGAVIFEKLEA 365
KC+ + ++ S +F H +I+ V Y + GA+ + LE+
Sbjct: 2 KCSFHIPEKYQWASTLFVHVALIAGVAVYTVFGALSMQWLES 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,583,652
Number of Sequences: 27780
Number of extensions: 222761
Number of successful extensions: 730
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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