Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30280
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g33020.1 68414.m04066 F-box family protein 31 0.35
At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do... 28 4.3
At5g18500.1 68418.m02183 protein kinase family protein contains ... 28 4.3
At2g20400.1 68415.m02381 myb family transcription factor contain... 28 4.3
At5g29000.2 68418.m03590 myb family transcription factor contain... 27 5.7
At5g29000.1 68418.m03589 myb family transcription factor contain... 27 5.7
At4g23360.1 68417.m03369 expressed protein predicted proteins, A... 27 5.7
At4g23350.1 68417.m03368 expressed protein predicted proteins, A... 27 5.7
At3g61690.1 68416.m06913 expressed protein 27 5.7
At4g28610.1 68417.m04091 myb family transcription factor, putati... 27 9.9
At3g50150.1 68416.m05482 expressed protein contains Pfam profile... 27 9.9
At1g73650.3 68414.m08526 expressed protein 27 9.9
At1g73650.2 68414.m08528 expressed protein 27 9.9
At1g73650.1 68414.m08527 expressed protein 27 9.9
>At1g33020.1 68414.m04066 F-box family protein
Length = 548
Score = 31.5 bits (68), Expect = 0.35
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 347 DDGSEDAVSHDQADHH 300
DDG ED V+H Q DHH
Sbjct: 441 DDGDEDTVAHQQRDHH 456
>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
domain-containing protein contains Pfam domain PF00043:
Glutathione S-transferase, C-terminal domain
Length = 399
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 203 PQFTPRHFGHEFTHRDPQAS 144
P F+PRHF +H+ P+ S
Sbjct: 12 PSFSPRHFSPRMSHQSPKPS 31
>At5g18500.1 68418.m02183 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 484
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 203 PQFTPRHFGHEFTHRDPQASPHNHSRSNSI 114
P+F+ +GH FT RD Q + + SR N I
Sbjct: 143 PEFSHLGWGHWFTLRDLQMATNQFSRDNII 172
>At2g20400.1 68415.m02381 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 397
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 222 GTQSYHSSVHAETFRTRVYTPRPSSVSPQS 133
G +H H + +RT Y P PS SP++
Sbjct: 270 GLTIFHVKSHLQKYRTAKYIPVPSEGSPEA 299
>At5g29000.2 68418.m03590 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 413
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 225 PGTQSYHSSVHAETFRTRVYTPRPSSVS 142
PG YH H + +RT Y P S V+
Sbjct: 269 PGLTIYHVKSHLQKYRTARYKPETSEVT 296
>At5g29000.1 68418.m03589 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 370
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 225 PGTQSYHSSVHAETFRTRVYTPRPSSVS 142
PG YH H + +RT Y P S V+
Sbjct: 226 PGLTIYHVKSHLQKYRTARYKPETSEVT 253
>At4g23360.1 68417.m03369 expressed protein predicted proteins,
Arabidopsis thaliana contains Pfam profile PF03080:
Arabidopsis proteins of unknown function; expression
supported by MPSS
Length = 873
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 288 FSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIWT 446
F+HFV++ L++ IL A ++ A K ++K + I K +S T
Sbjct: 4 FNHFVLLILLIITLILSAEATKERRAIPSKAERNEMKRQLKAINKPAIKSFKT 56
>At4g23350.1 68417.m03368 expressed protein predicted proteins,
Arabidopsis thaliana contains Pfam profile PF03080:
Arabidopsis proteins of unknown function
Length = 386
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 288 FSHFVMISLVVAYCILGAVIFEKLEAEHEKDHFEQVKMNISQIRKNTTQSIWT 446
F+HFV++ L++ IL A ++ A K ++K + I K +S T
Sbjct: 4 FNHFVLLLLLIITLILSAEATKERRAIPSKAERNEMKRQLKAINKPAIKSFKT 56
>At3g61690.1 68416.m06913 expressed protein
Length = 1303
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = -2
Query: 320 HDQADHHEVRENHRT*LPXXXXXXXXXXXXXXXVLNPITPQ-FTPRHFGHEFTHRDPQAS 144
HD+ DHH RE + PI+ Q + RH+G + H S
Sbjct: 1131 HDRTDHHSDREGNWNAGSKTRGSGRNHNNRNQADNKPISRQDRSDRHWGSSYRHESSSYS 1190
Query: 143 PHNHSRSNSI 114
H HS++ I
Sbjct: 1191 AH-HSQNGPI 1199
>At4g28610.1 68417.m04091 myb family transcription factor, putative
/ phosphate starvation response regulator, putative
(PHR1) contains Pfam profile: PF00249 myb-like
DNA-binding domain; identical to cDNA phosphate
starvation response regulator 1 (phr1 gene) GI:15384675
Length = 409
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -1
Query: 222 GTQSYHSSVHAETFRTRVYTPRPSSV-SPQ 136
G YH H + +RT Y P PS SP+
Sbjct: 264 GLTIYHVKSHLQKYRTARYRPEPSETGSPE 293
>At3g50150.1 68416.m05482 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function; expression
supported by MPSS
Length = 509
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 197 FTPRHFGHEFTHRDPQASPHNH 132
F P H HE T RD + HNH
Sbjct: 22 FVPIHSFHEITRRDLGQNLHNH 43
>At1g73650.3 68414.m08526 expressed protein
Length = 302
Score = 26.6 bits (56), Expect = 9.9
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 288 FSHFVMISLVVAYCI-LGAVIFEKLEAEHEKDHFEQVKMNISQ-IRKNTTQSIWTMTKSV 461
F V+ LVV + + LG + ++ E F++ + NI + I T Q++W T S+
Sbjct: 61 FRQIVLTLLVVVWGLRLGIFLLMRILQWGEDRRFDEQRGNIVRLIIFWTLQAVWVWTVSL 120
Query: 462 PL 467
PL
Sbjct: 121 PL 122
>At1g73650.2 68414.m08528 expressed protein
Length = 291
Score = 26.6 bits (56), Expect = 9.9
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 288 FSHFVMISLVVAYCI-LGAVIFEKLEAEHEKDHFEQVKMNISQ-IRKNTTQSIWTMTKSV 461
F V+ LVV + + LG + ++ E F++ + NI + I T Q++W T S+
Sbjct: 61 FRQIVLTLLVVVWGLRLGIFLLMRILQWGEDRRFDEQRGNIVRLIIFWTLQAVWVWTVSL 120
Query: 462 PL 467
PL
Sbjct: 121 PL 122
>At1g73650.1 68414.m08527 expressed protein
Length = 290
Score = 26.6 bits (56), Expect = 9.9
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 288 FSHFVMISLVVAYCI-LGAVIFEKLEAEHEKDHFEQVKMNISQ-IRKNTTQSIWTMTKSV 461
F V+ LVV + + LG + ++ E F++ + NI + I T Q++W T S+
Sbjct: 61 FRQIVLTLLVVVWGLRLGIFLLMRILQWGEDRRFDEQRGNIVRLIIFWTLQAVWVWTVSL 120
Query: 462 PL 467
PL
Sbjct: 121 PL 122
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,863,467
Number of Sequences: 28952
Number of extensions: 205171
Number of successful extensions: 614
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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