Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30279
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 54 7e-08
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 54 7e-08
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 54 7e-08
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 54 7e-08
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 54 7e-08
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 52 2e-07
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 48 6e-06
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 48 6e-06
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 44 6e-05
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2) 38 0.005
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12) 29 3.0
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 4 SHDVVKRRPVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 60 SHDVVKRRPVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 628 SHDVVKRRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 39 SHDVVKRRPVNCNTTHYRANW 59
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 41 SHDVVKRRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 1879 SHDVVKRRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 39 SHDVVKRRPVNCNTTHYRANW 59
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 33 SHDVVKRRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 82 SHDVVKRRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 60 SHDVVKRRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 71 SHDVVKRRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 47 SHDVVKRRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 54.0 bits (124), Expect = 7e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRANW 454
SHDVVKRRPVNCNTTHYRANW
Sbjct: 71 SHDVVKRRPVNCNTTHYRANW 91
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1
Query: 513 HDVVKRRPVNCNTTHYRANW 454
HDVVKRRPVNCNTTHYRANW
Sbjct: 2 HDVVKRRPVNCNTTHYRANW 21
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1
Query: 513 HDVVKRRPVNCNTTHYRANW 454
HDVVKRRPVNCNTTHYRANW
Sbjct: 2 HDVVKRRPVNCNTTHYRANW 21
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRAN 457
SHDVVKRRPVNCNTTHYRAN
Sbjct: 21 SHDVVKRRPVNCNTTHYRAN 40
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1
Query: 433 TRGGARYPIRPIVSRITIHWPSFYNVVT 516
T GGA PIRPIVS ITIHWPSFYN VT
Sbjct: 36 TVGGA--PIRPIVSHITIHWPSFYNGVT 61
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +1
Query: 433 TRGGARYPIRPIVSRITIHWPSFYNVVT 516
T GGA PIRPIVSRITIHWP+FYN T
Sbjct: 34 TDGGA--PIRPIVSRITIHWPAFYNAPT 59
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 516 SHDVVKRRPVNCNTTHYRAN 457
SHD KRRPVNCNTTHYRAN
Sbjct: 78 SHDGEKRRPVNCNTTHYRAN 97
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 457 IRPIVSRITIHWPSFYNVVT 516
+RP+VSRITIHW SFYNVVT
Sbjct: 33 LRPVVSRITIHWTSFYNVVT 52
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 40.7 bits (91), Expect = 7e-04
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1
Query: 463 PIVSRITIHWPSFYNVVT 516
P +SRITIHWPSFYNVVT
Sbjct: 77 PYMSRITIHWPSFYNVVT 94
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 457 IRPIVSRITIHWPSFY 504
IRPIVSRITIHWPSFY
Sbjct: 18 IRPIVSRITIHWPSFY 33
>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
Length = 98
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVVT 516
SRITIHWPSFYNVVT
Sbjct: 2 SRITIHWPSFYNVVT 16
>SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVV 513
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.7 bits (76), Expect = 0.046
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 472 SRITIHWPSFYNVV 513
SRITIHWPSFYNV+
Sbjct: 2 SRITIHWPSFYNVM 15
>SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 487 HWPSFYNVVT 516
HWPSFYNVVT
Sbjct: 5 HWPSFYNVVT 14
>SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 487 HWPSFYNVVT 516
HWPSFYNVVT
Sbjct: 62 HWPSFYNVVT 71
>SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 487 HWPSFYNVVT 516
HWPSFYNVVT
Sbjct: 5 HWPSFYNVVT 14
>SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 487 HWPSFYNVVT 516
HWPSFYNVVT
Sbjct: 57 HWPSFYNVVT 66
>SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12)
Length = 1650
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 282 NVRCRRLESTLVSDVGHSVSNTVRADVRKFSANLKSFVFS 163
N+ R+ + DV S NTV+ D++ +LKSFV S
Sbjct: 894 NLVALRIAGRVPQDVTGSTRNTVQKDIQGIEDSLKSFVES 933
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,083,622
Number of Sequences: 59808
Number of extensions: 230105
Number of successful extensions: 3272
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3270
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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