Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30273
         (471 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    31   0.005
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.62 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   2.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   4.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   4.3  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   4.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.7  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 31.1 bits (67), Expect = 0.005
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 56  KERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDT 181
           KE  ++ +RH   K+  D E L+ K+ P+ Q   +YE  V T
Sbjct: 82  KETAEKVIRHLTQKRARDWERLSKKYDPQGQYKKRYEEHVAT 123


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 85  QSSQEGSRPRSAHRQAPAQNS 147
           QSS+   RPRS+ + AP + +
Sbjct: 232 QSSESSLRPRSSQKSAPGKRT 252


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +2

Query: 122 TGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGR 289
           TG+   K +  S ++   D     D  K+     +++ +    K +   A+QFGGR
Sbjct: 500 TGRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIPEWLGSKSYGGSADQFGGR 555


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 257 WQERAEQFGGRQKARLPKWFGERPGK 334
           + +R +  G R  A  P W  + PGK
Sbjct: 556 FSDRLKSRGIRTAAIWPLWCSQNPGK 581


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 14  KXRQKRQDYDLKELKERQKQQLRHKA 91
           + + K++   +KEL E++KQ    KA
Sbjct: 275 RMKLKKEIQAIKELNEQEKQAQAQKA 300


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 14  KXRQKRQDYDLKELKERQKQQLRHKA 91
           + + K++   +KEL E++KQ    KA
Sbjct: 57  RMKLKKEIQAIKELNEQEKQAQAQKA 82


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 28  ETGLRLKRAQRKTKAATEAQSSQE 99
           E G+ LKR QR+++    A    E
Sbjct: 211 EPGIPLKRKQRRSRTTFTAHQLDE 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.125    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,953
Number of Sequences: 336
Number of extensions: 1011
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)