Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30273
(471 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 35 0.038
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 34 0.067
04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204 31 0.62
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 29 1.4
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 1.9
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 2.5
05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238 28 3.3
01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,986... 28 3.3
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 28 4.4
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 27 5.8
12_02_0238 - 16099652-16099741,16099814-16100257 27 7.6
07_01_0251 + 1874148-1874311,1874367-1874429,1874484-1874709,187... 27 7.6
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 27 7.6
03_01_0146 - 1161005-1161133,1161239-1161283,1161369-1161469,116... 27 7.6
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 27 7.6
01_05_0677 - 24202037-24202444,24202499-24202795,24202960-242030... 27 7.6
>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 34.7 bits (76), Expect = 0.038
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Frame = +2
Query: 5 TISKXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRV--- 175
+IS +KR D+KELK ++KQ + K + +H + Q K + V
Sbjct: 971 SISLKEEKRLLQDIKELKAQKKQLSSNMGSKAEMGEAFEQKEHIHEQQKILKKDSDVLLT 1030
Query: 176 DTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWF--GERPGKK 337
+ +S +DK + + + +D L K+ +E RQKA +WF + PG+K
Sbjct: 1031 NLKSLEDKTRFIKKAFDD-ERDALRKLTEEHQAAHEVRQKA-YDEWFELKKEPGRK 1084
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 33.9 bits (74), Expect = 0.067
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 2 NTISKXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEAL-TGKHPPKIQVASKYERRVD 178
+T K QK Q KELK+++K++ R + +K EAL K K + K ++R
Sbjct: 328 STNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMKKQQRKQ 387
Query: 179 TRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQ 277
++K E + + K +K QE AE+
Sbjct: 388 EEEAQKEQKRREKEEAETRKQ--QKKQQEEAEK 418
>04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204
Length = 546
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 28 ETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSV 156
E GL ++ + + + T +S + SRP SAH P S V
Sbjct: 300 EKGLDWRKMETEIEQKTSRPTSSQSSRPNSAHSSRPGSPGSQV 342
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 10 LEXEAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVRE 168
++ EAK KRA+ A A++ ++ R R A R+A Q +V + E
Sbjct: 661 IQAEAKAAEDARKRAEAAAAAEAAAEAKRQREREREAARKALQQMEKTVDINE 713
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGK 130
+ +++ ++ +E K R+K++ + K LKK + + LTGK
Sbjct: 457 RLKKEEEERKAEEAKRRKKEREKEKLLKKKQEGKLLTGK 495
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 23 QKRQDYDL-KELKERQKQQLRHKALKKGLDPEALTGK 130
Q+ +D + +E+K +QK++ + K +KK D + LTGK
Sbjct: 207 QREEDERMVEEMKMQQKERDKGKTMKKRQDGKTLTGK 243
>05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238
Length = 490
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +1
Query: 40 RLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTILRRQKETVRG* 219
R K +TKA+ EA Q+G R + R+ + + LR+++E R
Sbjct: 417 RSKTEAARTKASQEAFREQQGLRQEALQRKKAEKKKLMEEAEAKLSAEALRKKEEKERA- 475
Query: 220 PRETEQGLPREGVAR 264
R+ ++ +P+ + R
Sbjct: 476 -RQMKKSMPKVKMLR 489
>01_01_1220 +
9862195-9862281,9862427-9862646,9862764-9862916,
9863016-9863674,9863749-9863852,9863950-9864192,
9864262-9864376,9864696-9864909,9864995-9865511,
9866439-9866448,9867363-9867551,9867755-9868084,
9868639-9868872,9869303-9869743
Length = 1171
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 221 GHPRTVSFCRRRIVCRHASRTWTLLEFWAG 132
GH R VS R R + H +R+W L+ +G
Sbjct: 103 GHERVVSVFRDRALELHTTRSWDFLDVQSG 132
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 68 KQQLRHKALKKGLDPEALTGKHPP 139
K+ RH KK +D +T KHPP
Sbjct: 882 KKSARHSRNKKKVDEAPVTSKHPP 905
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 27.5 bits (58), Expect = 5.8
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -2
Query: 266 SLATPSRGSPCSVSLGHPRTVSFCRR---RIVCRHASRTWTLLEFWAGACL*ALRGRD 102
S+ PS + CS+ G +TV C R R+VC H R +F+ G C L RD
Sbjct: 435 SILVPSDANYCSIREGRTQTVGECLRREYRMVC-HVMRGDFSRDFFEG-CRAILLDRD 490
>12_02_0238 - 16099652-16099741,16099814-16100257
Length = 177
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 293 FACRRTVRPSLATPSRGSPC 234
F RR P L TP+R +PC
Sbjct: 6 FMARRRGNPELVTPARATPC 25
>07_01_0251 +
1874148-1874311,1874367-1874429,1874484-1874709,
1874830-1875081,1875158-1875267,1875720-1875815,
1875898-1875985,1876246-1876475,1876745-1876929,
1877136-1877335,1877592-1877924,1878058-1878159,
1878869-1879166,1879626-1879774,1879859-1880143,
1880531-1880728
Length = 992
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 155 SKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQ 262
+KYE ++ SYDD K+ G++ K F K WQ
Sbjct: 633 NKYETKIAYPSYDDSSKIALGNILK----FRRKNWQ 664
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 27.1 bits (57), Expect = 7.6
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 146 QVASKYE-RRVDTRSY-DDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQ 292
QV SK + DT SY DD+ L G L N DF V +R + GR+
Sbjct: 940 QVTSKTDVSSGDTSSYQDDQSSLHGGSLPWKNTDFESTVDFDRQLPYDGRE 990
>03_01_0146 -
1161005-1161133,1161239-1161283,1161369-1161469,
1161585-1161691,1161823-1161924,1162028-1162250,
1162343-1162382
Length = 248
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 7 DLEXEAKETGLRLKRAQRKTKAAT 78
DL+ + +ET +L+RAQ+K K+ T
Sbjct: 193 DLDEKTEETSNQLQRAQKKLKSVT 216
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 28 ETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSS 150
E GL ++ + + T +S + SRP SAH P S
Sbjct: 295 EKGLDWRKMETEIDHKTSRPTSSQSSRPGSAHSSLPGSPGS 335
>01_05_0677 -
24202037-24202444,24202499-24202795,24202960-24203009,
24204534-24204589,24205751-24206040,24206100-24206488,
24210578-24210818
Length = 576
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 109 PRSAH-RQAPAQNSSSVQVREACRHTILRRQKETVRG*PRE 228
PR+ H R+AP + V +R ++TILR + +R PR+
Sbjct: 329 PRTRHGRRAPTPDPFVVNMRNPAQYTILRHHDQFLR--PRD 367
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.125 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,528,514
Number of Sequences: 37544
Number of extensions: 132571
Number of successful extensions: 692
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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