Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30273
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 94 5e-20
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 94 5e-20
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 91 4e-19
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 91 4e-19
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 77 8e-15
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 70 1e-12
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 69 1e-12
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 31 0.32
Z81097-11|CAB03170.2| 485|Caenorhabditis elegans Hypothetical p... 31 0.32
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.42
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 31 0.42
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 31 0.55
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 31 0.55
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 30 0.96
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 29 1.7
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 29 2.2
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 29 2.2
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 2.2
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 2.2
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 2.9
Z82268-11|CAB05203.1| 262|Caenorhabditis elegans Hypothetical p... 28 2.9
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 2.9
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 28 2.9
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 2.9
AL021476-2|CAA16318.1| 262|Caenorhabditis elegans Hypothetical ... 28 2.9
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 3.9
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 27 5.1
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 27 5.1
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 27 6.8
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 27 6.8
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 27 6.8
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical pr... 27 9.0
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 9.0
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 9.0
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 27 9.0
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 27 9.0
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 27 9.0
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 9.0
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 9.0
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 9.0
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 93.9 bits (223), Expect = 5e-20
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +2
Query: 20 RQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSYDD 196
R++RQDYD+KEL ERQ+Q R+KALKKGLDP EA + HPPKI ASK++R+ D RSY D
Sbjct: 256 RRERQDYDMKELHERQRQAARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGD 315
Query: 197 KKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARL 304
++ LFE E+ + + AE +G +Q L
Sbjct: 316 RRYLFENPEEEKQASLVRGTGRPPAE-WGRKQNEEL 350
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 93.9 bits (223), Expect = 5e-20
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +2
Query: 20 RQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSYDD 196
R++RQDYD+KEL ERQ+Q R+KALKKGLDP EA + HPPKI ASK++R+ D RSY D
Sbjct: 256 RRERQDYDMKELHERQRQAARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGD 315
Query: 197 KKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARL 304
++ LFE E+ + + AE +G +Q L
Sbjct: 316 RRYLFENPEEEKQASLVRGTGRPPAE-WGRKQNEEL 350
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 91.1 bits (216), Expect = 4e-19
Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +2
Query: 20 RQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSYDD 196
R++RQ+YDLKEL ERQ+Q R+KALKKGLDP EA + HPPKI ASK++R+ D RSY D
Sbjct: 161 RRERQEYDLKELNERQRQVARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGD 220
Query: 197 KKKLFEGDLEK 229
++ LFE K
Sbjct: 221 RRYLFENPFVK 231
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 91.1 bits (216), Expect = 4e-19
Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +2
Query: 20 RQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSYDD 196
R++RQ+YDLKEL ERQ+Q R+KALKKGLDP EA + HPPKI ASK++R+ D RSY D
Sbjct: 265 RRERQEYDLKELNERQRQVARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGD 324
Query: 197 KKKLFEGDLEK 229
++ LFE K
Sbjct: 325 RRYLFENPFVK 335
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 76.6 bits (180), Expect = 8e-15
Identities = 32/66 (48%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 RQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKHPPKIQVASKYERRVDTRSYDD 196
R +RQ+YD+KEL ERQ+Q R+ ALKKG+DP E ++P K+Q+ SKY+R+VD R++ +
Sbjct: 1076 RHERQEYDMKELNERQRQVTRNSALKKGIDPAEVGNTRYPAKVQIVSKYDRQVDRRNFRE 1135
Query: 197 KKKLFE 214
++ +F+
Sbjct: 1136 RRSVFD 1141
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +2
Query: 26 KRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKK 205
K QDY+ + ER+K++ K LK+ + L + K ++ + D R +++++
Sbjct: 905 KLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEK-EMEERRRAADDRRRQEEEER 963
Query: 206 LFEGDLEKLNKD 241
+ D ++ N++
Sbjct: 964 KAKVDQDRRNRE 975
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/69 (40%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +2
Query: 20 RQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVASKYERRVDTRSYDD 196
R +RQ+YDLKEL ER +Q R K G + + G+HPPK+Q++SKY+R++D R++ +
Sbjct: 240 RHERQEYDLKELNERSRQVARANNAKNGQVSGDDTGGRHPPKVQISSKYDRQIDRRNFKE 299
Query: 197 KKKLFEGDL 223
+++++E +
Sbjct: 300 RRQVYENKI 308
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 69.3 bits (162), Expect = 1e-12
Identities = 28/66 (42%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 RQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVASKYERRVDTRSYDD 196
R +RQ+YDLKEL ER +Q R K G + + G+HPPK+Q++SKY+R++D R++ +
Sbjct: 240 RHERQEYDLKELNERSRQVARANNAKNGQVSGDDTGGRHPPKVQISSKYDRQIDRRNFKE 299
Query: 197 KKKLFE 214
+++++E
Sbjct: 300 RRQVYE 305
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 31.5 bits (68), Expect = 0.32
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 193
K RQK D D+ + RQK R + ++ +D KH ++++ S TR +
Sbjct: 167 KCRQKNLDPDVVRTERRQKDAARQRTIQSYIDEARPDWKHKLEVKLVSLGGDEFGTRD-N 225
Query: 194 DKKKLFEGDLEKLNKD 241
+ +L++ ++KD
Sbjct: 226 ESFELYKNYQHTIHKD 241
>Z81097-11|CAB03170.2| 485|Caenorhabditis elegans Hypothetical
protein K07A1.9a protein.
Length = 485
Score = 31.5 bits (68), Expect = 0.32
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 193
K RQK D D+ + RQK R + ++ +D KH ++++ S TR +
Sbjct: 195 KCRQKNLDPDVVRTERRQKDAARQRTIQSYIDEARPDWKHKLEVKLVSLGGDEFGTRD-N 253
Query: 194 DKKKLFEGDLEKLNKD 241
+ +L++ ++KD
Sbjct: 254 ESFELYKNYQHTIHKD 269
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 31.1 bits (67), Expect = 0.42
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQ-KQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSY 190
+ R+K ++ D ++ +ERQ K++ R A ++ ++ +A ++ + R+ +
Sbjct: 140 RDREKERERDERKERERQQKEKEREDAARREIEEKA--EMDAKRVAEEEEERRKEKEKRR 197
Query: 191 DDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 352
++KKK E EK + EK + E+ R+K R + ER +++ E E
Sbjct: 198 EEKKKQKELLKEKERSERKEKERELEREKEKSREKEREKEREKEREKEREKERE 251
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.42
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 25 KETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAP-AQNSSSVQVREACRHTILRRQK 201
+ET L+ + +KT + SS++ +PR R+AP + +SSS +R+A R + R++
Sbjct: 342 RETNRTLEESLKKTLKINK--SSEKMEKPRKDIRRAPRSSSSSSSTLRDAEREQDIERRR 399
Query: 202 E 204
E
Sbjct: 400 E 400
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 30.7 bits (66), Expect = 0.55
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 53 LKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKL 232
+ E++K++L HK L G D E + K K + K E+R + DKKK + +
Sbjct: 247 MTEKEKKKL-HKKLMSGADLEDVMKKKSKKEKKKEKKEKRKNKDKKKDKKKNKKSKSRET 305
Query: 233 NKDF----LEKVWQERAEQFGGRQKARLPKW 313
+ D E W+E++ + R+ P++
Sbjct: 306 DDDSDGSDSEDDWKEKSSKRIKREVESSPEY 336
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 30.7 bits (66), Expect = 0.55
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 53 LKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKL 232
+ E++K++L HK L G D E + K K + K E+R + DKKK + +
Sbjct: 247 MTEKEKKKL-HKKLMSGADLEDVMKKKSKKEKKKEKKEKRKNKDKKKDKKKNKKSKSRET 305
Query: 233 NKDF----LEKVWQERAEQFGGRQKARLPKW 313
+ D E W+E++ + R+ P++
Sbjct: 306 DDDSDGSDSEDDWKEKSSKRIKREVESSPEY 336
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 29.9 bits (64), Expect = 0.96
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 13 EXEAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQA-PAQNSSSVQVREACRH 180
E E E R +R +++ +AAT + + + R RS HR + +++S + R RH
Sbjct: 248 EFEQAEETKRKERREKRAEAATTSDTERRRHRSRSPHRSSHDSRDSRDSRDRREHRH 304
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/99 (23%), Positives = 47/99 (47%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 193
K ++++ + +E KE +K+ K +K + + K + + K E + D D
Sbjct: 68 KKKEEKVEKKPEENKEAEKKDEPKKEEEKKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRD 127
Query: 194 DKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPK 310
+KKK E + NK+ EK +E+ E +++ +P+
Sbjct: 128 EKKKDGEKKEDDENKEDNEKKKEEKKEDEKPKKEEIVPQ 166
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.1 bits (62), Expect = 1.7
Identities = 23/96 (23%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Frame = +2
Query: 20 RQKRQDYDLKELKERQKQQLRHKALKKGLDPEA-LTGKHPPKIQVASKYERRVDTRSYDD 196
+++ ++ +KE +E+Q++ L +A KK + EA L + KI K ++ ++ ++
Sbjct: 529 QREEEEARIKEEEEKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKELE----EE 584
Query: 197 KKKLFEGDLE-KLNKDFLEKVWQERAEQFGGRQKAR 301
+KK E +++ K ++ +K +E ++ +KAR
Sbjct: 585 RKKKEELEIKRKAEEEKKKKALEEEKKRKIAEEKAR 620
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +2
Query: 26 KRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKK 205
K QDY+ + ER+K++ K LK+ + L + K ++ + D R +++++
Sbjct: 71 KLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEK-EMEERRRAADDRRRQEEEER 129
Query: 206 LFEGDLEKLNKD 241
+ D ++ N++
Sbjct: 130 KAKVDQDRRNRE 141
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +2
Query: 26 KRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKK 205
K QDY+ + ER+K++ K LK+ + L + K ++ + D R +++++
Sbjct: 71 KLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEK-EMEERRRAADDRRRQEEEER 129
Query: 206 LFEGDLEKLNKD 241
+ D ++ N++
Sbjct: 130 KAKVDQDRRNRE 141
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/64 (26%), Positives = 37/64 (57%)
Frame = +2
Query: 50 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEK 229
++KE ++ + + K L+ ++ PK +ASK+ER+ +++ D++ LF + +K
Sbjct: 221 KIKELHQRICKLETEKYDLEKRHERQEYDPKQLIASKFERQ-RVQTFSDRRALFT-NTKK 278
Query: 230 LNKD 241
L+ D
Sbjct: 279 LDTD 282
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/102 (20%), Positives = 48/102 (47%)
Frame = +2
Query: 32 QDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 211
+D ++ E ++++ R + LK+ + E GK PPK + A K + DD+++
Sbjct: 19 EDLEMARQIENERKEKRAQKLKEKRERE---GKPPPKKRPAKKRKASSSEEDDDDEEESP 75
Query: 212 EGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKK 337
+K K + + +++ R+K++ K ++ +K
Sbjct: 76 RKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEK 117
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/102 (20%), Positives = 48/102 (47%)
Frame = +2
Query: 32 QDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF 211
+D ++ E ++++ R + LK+ + E GK PPK + A K + DD+++
Sbjct: 19 EDLEMARQIENERKEKRAQKLKEKRERE---GKPPPKKRPAKKRKASSSEEDDDDEEESP 75
Query: 212 EGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKK 337
+K K + + +++ R+K++ K ++ +K
Sbjct: 76 RKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEK 117
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 2.9
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 26 KRQDYDLKEL-KERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD-DK 199
++QD + +L KE++ Q+ ++ L + L E G H K++ +K E+ +D ++
Sbjct: 992 QQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVK--AKLEQTLDDLEDSLER 1049
Query: 200 KKLFEGDLEKLNK--DFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 355
+K DL+K + + K+ QE ++ GRQ+ L KK+ EL S
Sbjct: 1050 EKRARADLDKQKRKVEGELKIAQENIDE-SGRQRHDLE----NNLKKKESELHS 1098
>Z82268-11|CAB05203.1| 262|Caenorhabditis elegans Hypothetical
protein Y37A1C.1b protein.
Length = 262
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 2 NTISKXRQKRQDYDLKELKERQKQQLRHKALKK 100
N +SK Q+R+D++ K+ +QK Q HK K+
Sbjct: 225 NLLSKEDQERRDFERKKRINQQKLQEMHKMHKE 257
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 2.9
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 26 KRQDYDLKEL-KERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD-DK 199
++QD + +L KE++ Q+ ++ L + L E G H K++ +K E+ +D ++
Sbjct: 992 QQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVK--AKLEQTLDDLEDSLER 1049
Query: 200 KKLFEGDLEKLNK--DFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 355
+K DL+K + + K+ QE ++ GRQ+ L KK+ EL S
Sbjct: 1050 EKRARADLDKQKRKVEGELKIAQENIDE-SGRQRHDLE----NNLKKKESELHS 1098
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 7 DLEXEAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAP-AQNSSSVQVREACRHT 183
D E E K +L+RAQ +++ E SSQ+ + + ++ AQ SS ++ A +
Sbjct: 392 DAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETA--NE 449
Query: 184 ILRRQKETVRG*PRETE 234
++R T+ ETE
Sbjct: 450 MVRSLTATLENSNSETE 466
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 7 DLEXEAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAP-AQNSSSVQVREACRHT 183
D E E K +L+RAQ +++ E SSQ+ + + ++ AQ SS ++ A +
Sbjct: 392 DAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETA--NE 449
Query: 184 ILRRQKETVRG*PRETE 234
++R T+ ETE
Sbjct: 450 MVRSLTATLENSNSETE 466
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +2
Query: 122 TGKHPPKIQVASKYERRVDTRSYDDKKKL-----FEGDLEKLNKDFLEKVWQERAEQFGG 286
T H PK E D+ DK K + D+ +N+++ + + FG
Sbjct: 406 TRVHKPKSATDYGVESESDSDFERDKSKQKNFPKWASDMNIVNEEYAKNLEFNVNTFFGS 465
Query: 287 RQKARLPKWFGERPGKKK 340
+KA L + FGE KKK
Sbjct: 466 MEKANLTEIFGEMVRKKK 483
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 2.9
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 26 KRQDYDLKEL-KERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD-DK 199
++QD + +L KE++ Q+ ++ L + L E G H K++ +K E+ +D ++
Sbjct: 995 QQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVK--AKLEQTLDDLEDSLER 1052
Query: 200 KKLFEGDLEKLNK--DFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 355
+K DL+K + + K+ QE ++ GRQ+ L KK+ EL S
Sbjct: 1053 EKRARADLDKQKRKVEGELKIAQENIDE-SGRQRHDLE----NNLKKKESELHS 1101
>AL021476-2|CAA16318.1| 262|Caenorhabditis elegans Hypothetical
protein Y37A1C.1b protein.
Length = 262
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 2 NTISKXRQKRQDYDLKELKERQKQQLRHKALKK 100
N +SK Q+R+D++ K+ +QK Q HK K+
Sbjct: 225 NLLSKEDQERRDFERKKRINQQKLQEMHKMHKE 257
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 25 KETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVR 165
K R K+ R+ K+ + + +Q+GS R H++ ++N S Q+R
Sbjct: 153 KRNSSRRKKNGRRKKS--DVRKAQQGSDERKKHKKQNSKNLSKEQIR 197
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 3.9
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 40 RLKRAQRKTKAATEAQSSQEGSRPRSAHR---QAPAQNSSSVQVREACRHTILRRQ--KE 204
R K+ +R +++ + SS+ SR R R + +SSS + R RH +Q KE
Sbjct: 151 RKKKGERSGSSSSSSGSSRSPSRGRRGGRGGRSGSSSSSSSSESRSPGRHEEPEKQGKKE 210
Query: 205 TVRG*PRETEQGLPREGVAREGRTVRRQAKG 297
++ ++ +G+ G R G R+ G
Sbjct: 211 ELKQLKKQKSEGVEHRG--RSGSPGGRRGHG 239
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 27.5 bits (58), Expect = 5.1
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +1
Query: 19 EAKETGLRLKR--AQRKT--KAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTI 186
E ET +L+R AQ K + A A+++ + + RSA R+ ++ V+VRE R
Sbjct: 303 EEVETRAQLERRVAQNKKSEQEAKMAEAAAKARQERSAMRRKDDEDDEQVKVREEIRRDR 362
Query: 187 L---RRQKETVRG*PRETEQ 237
L R+++ R P + ++
Sbjct: 363 LDDIRKERNIARSRPDKADK 382
>Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical
protein C53D6.5 protein.
Length = 153
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 170 RVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQER 268
R T + ++KL + L+K D L+K WQER
Sbjct: 85 RQRTEKLEIEQKLKDPKLDKATSDELKKQWQER 117
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 248 EKVWQERAEQFGGRQKARLPKWFGERP--GKKKGELE 352
E + Q+RA+Q GRQK K G +P GK K ++E
Sbjct: 555 ESLAQQRAKQKDGRQKQYGKKSMGPKPPNGKPKEKIE 591
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +2
Query: 8 ISKXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRS 187
++ + KR + E KE K++ R K P+A G+ P + K ++
Sbjct: 1739 VALTKSKRLKRKMLEKKESSKKETRVVMEVKPEQPKAKRGRMSP-APLLKKLRKKAGDDD 1797
Query: 188 YDDKKKLFEGDLE 226
+DD F D+E
Sbjct: 1798 FDDDSMKFLSDVE 1810
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 193
K + K + +E KE++K++ KK DP+ K P ++ +++ VD +
Sbjct: 98 KEKSKNEGSKKEEDKEKEKEKSNKAEDKKSEDPKKEDAK-KPDVKGKDTFKKPVDESAVA 156
Query: 194 DKKKLFEGDLEKLNKD 241
KK L LN D
Sbjct: 157 PKKDPNYQTLCGLNND 172
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 6.8
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +2
Query: 29 RQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKL 208
++DY+L + +E +K LKK LD G + + A+ E ++ K +
Sbjct: 574 KRDYELLQTRENEKS----VQLKKALDERKENGAYQQSVAKATDAE-------WERKMQF 622
Query: 209 FEGDLEKLNKDFLEKVWQERAEQFGGRQKAR 301
+E LE N + + + A +F + AR
Sbjct: 623 YEKQLEHANDERKREEQKRTAAEFDQSRVAR 653
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.1 bits (57), Expect = 6.8
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +2
Query: 29 RQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKL 208
++DY+L + +E +K LKK LD G + + A+ E ++ K +
Sbjct: 574 KRDYELLQTRENEKS----VQLKKALDERKENGAYQQSVAKATDAE-------WERKMQF 622
Query: 209 FEGDLEKLNKDFLEKVWQERAEQFGGRQKAR 301
+E LE N + + + A +F + AR
Sbjct: 623 YEKQLEHANDERKREEQKRTAAEFDQSRVAR 653
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 212 EGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKK 337
E + E K +LE++ +E A++FG + K P F ER +K
Sbjct: 33 EEEREACKKRYLERIEREEAQRFGKQFKID-PLTFAERLERK 73
>Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical
protein ZK632.11 protein.
Length = 453
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 155 SKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAE 274
+++E+ V R+ ++KL D+EK +D W++R E
Sbjct: 47 TEFEKFVIDRTITPQRKLNAEDVEKSGEDIGSSEWRKRLE 86
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 41 DLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGD 220
+L KER QL+H A+ G D G P+I+ + ++ + + +KLF+ +
Sbjct: 1312 ELAANKERL-DQLKHAAINLGDDKPEYHGTIDPQIEELATQWDELEKTTEEKGQKLFDAN 1370
Query: 221 LEKL 232
++L
Sbjct: 1371 RQQL 1374
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 41 DLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGD 220
+L KER QL+H A+ G D G P+I+ + ++ + + +KLF+ +
Sbjct: 1312 ELAANKERL-DQLKHAAINLGDDKPEYHGTIDPQIEELATQWDELEKTTEEKGQKLFDAN 1370
Query: 221 LEKL 232
++L
Sbjct: 1371 RQQL 1374
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2
Query: 251 SRGSPCSVSLGHPRTVSFCRRRIVCRHASRTWTLLE 144
SR SPCSVS G S RRR V R + W +E
Sbjct: 770 SRWSPCSVSCGEG---SQTRRRRVVRARNDDWEEIE 802
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 26.6 bits (56), Expect = 9.0
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +2
Query: 14 KXRQKRQDYD--LKELKERQKQQLR-HKALKKGLDPE-------ALTGKHPPKIQVASKY 163
K + ++DYD ++LK Q+ R K LKKG T + +
Sbjct: 386 KFEKIKEDYDELYEKLKRDQRDLERDQKILKKGTGERNKEFTETIATLRDKLRASETKNA 445
Query: 164 ERRVDTRSYDDKKKLFEGDLEKLNKD 241
+ R D R D+K K + ++EKL KD
Sbjct: 446 QYRQDIRVRDEKLKKKDEEIEKLQKD 471
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 26.6 bits (56), Expect = 9.0
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +2
Query: 14 KXRQKRQDYD--LKELKERQKQQLR-HKALKKGLDPE-------ALTGKHPPKIQVASKY 163
K + ++DYD ++LK Q+ R K LKKG T + +
Sbjct: 386 KFEKIKEDYDELYEKLKRDQRDLERDQKILKKGTGERNKEFTETIATLRDKLRASETKNA 445
Query: 164 ERRVDTRSYDDKKKLFEGDLEKLNKD 241
+ R D R D+K K + ++EKL KD
Sbjct: 446 QYRQDIRVRDEKLKKKDEEIEKLQKD 471
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 41 DLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGD 220
+L KER QL+H A+ G D G P+I+ + ++ + + +KLF+ +
Sbjct: 1312 ELAANKERL-DQLKHAAINLGDDKPEYHGTIDPQIEELATQWDELEKTTEEKGQKLFDAN 1370
Query: 221 LEKL 232
++L
Sbjct: 1371 RQQL 1374
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 41 DLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGD 220
+L KER QL+H A+ G D G P+I+ + ++ + + +KLF+ +
Sbjct: 1312 ELAANKERL-DQLKHAAINLGDDKPEYHGTIDPQIEELATQWDELEKTTEEKGQKLFDAN 1370
Query: 221 LEKL 232
++L
Sbjct: 1371 RQQL 1374
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 41 DLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGD 220
+L KER QL+H A+ G D G P+I+ + ++ + + +KLF+ +
Sbjct: 1312 ELAANKERL-DQLKHAAINLGDDKPEYHGTIDPQIEELATQWDELEKTTEEKGQKLFDAN 1370
Query: 221 LEKL 232
++L
Sbjct: 1371 RQQL 1374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.125 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,099,395
Number of Sequences: 27780
Number of extensions: 105265
Number of successful extensions: 607
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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