Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30273
(471 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g45976.1 68414.m05206 expressed protein 30 0.69
At5g48040.1 68418.m05936 hypothetical protein 28 2.8
At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit (... 28 2.8
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 28 2.8
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 28 2.8
At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to autop... 28 2.8
At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18) 28 3.7
At4g11450.1 68417.m01843 expressed protein 28 3.7
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 27 4.8
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 27 4.8
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 27 4.8
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 27 4.8
At3g28770.1 68416.m03591 expressed protein 27 4.8
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 27 4.8
At5g14270.1 68418.m01669 DNA-binding bromodomain-containing prot... 27 6.4
At4g31570.1 68417.m04483 expressed protein 27 6.4
At4g11990.1 68417.m01908 expressed protein hypothetical protein ... 27 6.4
At2g25530.1 68415.m03056 AFG1-like ATPase family protein contain... 27 6.4
At3g29075.1 68416.m03637 glycine-rich protein 27 8.5
At2g46060.2 68415.m05730 transmembrane protein-related contains ... 27 8.5
At2g46060.1 68415.m05729 transmembrane protein-related contains ... 27 8.5
At1g05690.1 68414.m00590 TAZ zinc finger family protein / BTB/PO... 27 8.5
At1g05100.1 68414.m00513 protein kinase family protein contains ... 27 8.5
>At1g45976.1 68414.m05206 expressed protein
Length = 325
Score = 30.3 bits (65), Expect = 0.69
Identities = 23/83 (27%), Positives = 37/83 (44%)
Frame = +2
Query: 26 KRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKK 205
+RQD D+ + Q QLRH L K + T + V E+ + + K K
Sbjct: 144 QRQDADIDRFLKIQGDQLRHAILDKIKRGQQKTVSLMEEKVVQKLREKDEELERINRKNK 203
Query: 206 LFEGDLEKLNKDFLEKVWQERAE 274
E +E+L + + WQ+RA+
Sbjct: 204 ELEVRMEQLTME--AEAWQQRAK 224
>At5g48040.1 68418.m05936 hypothetical protein
Length = 422
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +2
Query: 92 LKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF----EGDLEKLNKDFLEKVW 259
L++ D L KHP ++V K+ ++ D + L+ E DLEK N VW
Sbjct: 335 LREAYDRRHLIEKHP-LVEVREKFANMMNEGFLDRSRGLYQKSVEADLEKNNIKTSYPVW 393
Query: 260 QERAEQ 277
+ E+
Sbjct: 394 SDEEEE 399
>At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit
(IRX5) nearly identical to cellulose synthase
[Arabidopsis thaliana] GI:27462651; contains Pfam
profile PF03552: Cellulose synthase
Length = 1049
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +2
Query: 155 SKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGK 334
SK + R + R++ + D E + + W+ER +++ RQ+ R GE+ +
Sbjct: 123 SKQQWRPNGRAFSSTGSVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQTNE 182
Query: 335 KKGELE 352
K + E
Sbjct: 183 DKEDDE 188
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKI-QVASKYERRVDTRSY 190
K R+K + D + K+++K++ RHK + D E K ++ + ASK D ++
Sbjct: 84 KEREKDKSRDRVKEKDKEKERNRHKDRENERDNEKEKDKDRARVKERASKKSHEDDDETH 143
Query: 191 DDKKKLFEGDLEKLNK 238
++ D LN+
Sbjct: 144 KAAERYEHSDNRGLNE 159
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 155 SKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQE 265
S+ ER + ++D+++ EG++EKL+K LE+ + E
Sbjct: 429 SEKEREIKKNLFEDQQQQLEGNVEKLSK-ILEEPFDE 464
>At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to
autophagy 8c [Arabidopsis thaliana] GI:19912155;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 119
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 74 QLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDL 223
+L H ++ ++ + K+P +I V + R D + D KK L DL
Sbjct: 7 KLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADL 56
>At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18)
Length = 593
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDT 181
K R+K++ +L+ KE+++++ + K +K +D A ++ K + + T
Sbjct: 501 KYREKQRQQNLQVRKEKRQEEKKEKGKRKRVDASASNDPKKASRKLTGKQRQTIQT 556
>At4g11450.1 68417.m01843 expressed protein
Length = 694
Score = 27.9 bits (59), Expect = 3.7
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Frame = +2
Query: 2 NTISKXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHP-------PKIQVASK 160
N++ + R + + + KQ+ + K + D EA G +P P +++A+
Sbjct: 404 NSVKSDSEIRNNSMSGDASDTMKQRSQPKRTSQSYDLEASNGTNPWSAANLHPDLEIAAI 463
Query: 161 YERRVDTRSYDDKKKLFEGD---LEKLNKDFLEKVWQERAEQFGGRQKARL 304
+ DT + K GD +EK N L + +E+ E FG R +L
Sbjct: 464 IIQ--DTIEKRESLKYRRGDKRLMEKTNILGLSPIEEEKKELFGSRSLEKL 512
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 14 KXRQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYD 193
K + + D +ELK+ + +HK ++ LD E K K + R D +
Sbjct: 291 KDERVKMDESNEELKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKHREDLKHVK 350
Query: 194 DKKKLFEGDLEK 229
K K E LEK
Sbjct: 351 QKIKKLEDKLEK 362
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 47 KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSY-DDKKKLFEGDL 223
+ELK+ +++ R +ALK+ EA KH AS+ R + R ++ K ++ +L
Sbjct: 83 EELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQERDKTWQSEL 142
Query: 224 EKLNK 238
E + +
Sbjct: 143 EAMQR 147
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 47 KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSY-DDKKKLFEGDL 223
+ELK+ +++ R +ALK+ EA KH AS+ R + R ++ K ++ +L
Sbjct: 83 EELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQERDKTWQSEL 142
Query: 224 EKLNK 238
E + +
Sbjct: 143 EAMQR 147
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 47 KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSY-DDKKKLFEGDL 223
+ELK+ +++ R +ALK+ EA KH AS+ R + R ++ K ++ +L
Sbjct: 85 EELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQERDKTWQSEL 144
Query: 224 EKLNK 238
E + +
Sbjct: 145 EAMQR 149
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.5 bits (58), Expect = 4.8
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +2
Query: 2 NTISKXRQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVASKYERRVD 178
N + K ++K+ D ++ KE++ ++ K LKK D + T K Q +K E+
Sbjct: 1176 NEVDK-KEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEK--- 1231
Query: 179 TRSYDDKK---KLFEGDLEKLNKDFLEKVWQERAE 274
+ DDKK K G E + + E Q++++
Sbjct: 1232 NKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQ 1266
>At1g76780.1 68414.m08935 expressed protein ; expression supported
by MPSS
Length = 1871
Score = 27.5 bits (58), Expect = 4.8
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +2
Query: 23 QKRQDY--DLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDD 196
QKR D ++KEL+E Q + L P + KIQ + E Y++
Sbjct: 464 QKRHDKQENIKELREGQASEAEKNIKNDILKPVQKRSEGKHKIQKTFQEETNKQPEGYNE 523
Query: 197 KKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPK 310
K+ E +K+N+D KV QE Q + AR K
Sbjct: 524 --KIMETG-KKINEDGTRKV-QEMIRQQELDEPARSEK 557
>At5g14270.1 68418.m01669 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 688
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 1 KYDLEXEAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVRE 168
K L+ EAK ++A+ + A A++ ++ R A RQA + SV++ E
Sbjct: 555 KARLQAEAKAAEEARRKAEAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELNE 610
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Frame = +2
Query: 62 RQK-QQLRHKALKKGLDPE------ALTGKHPPKIQVASKYERRVDTRSYDDK 199
RQK QQ R K KG D + GK K + K+ER+ DT + D+
Sbjct: 15 RQKLQQFRQKKADKGTDQKKDSKGSTSQGKSSKKSNKSEKHERKPDTSAVSDE 67
>At4g11990.1 68417.m01908 expressed protein hypothetical protein
F7H19.40 - Arabidopsis thaliana, PID:e1310054
Length = 501
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 SKXRQKRQDYDLKELKER-QKQQLRHKALKKGLDPEAL 121
S RQK L+++ E Q+ L HKALKK LD +L
Sbjct: 203 SAKRQKLDGGLLRKVAEAAQETNLVHKALKKDLDKNSL 240
>At2g25530.1 68415.m03056 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 655
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 KHPPKIQVASKYE-RRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGR-QKAR 301
KH I + S+ + RRV ++ + + + ++F EK+W++ +Q+GG A
Sbjct: 419 KHCEIISIGSEVDYRRVAAKNSAENVHYLWPLNDAVLEEF-EKMWRQVTDQYGGEITSAT 477
Query: 302 LPKWFG 319
LP FG
Sbjct: 478 LPVMFG 483
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 26.6 bits (56), Expect = 8.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 32 QDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKK 205
+DYD + K ++K++ + K KK D K + +Y+ D YD+KKK
Sbjct: 152 KDYDDGDEKSKKKEKEKKKDKKK--DGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKK 207
>At2g46060.2 68415.m05730 transmembrane protein-related contains
weak similarity to Swiss-Prot:Q9HCN3 transmembrane
protein 8 precursor (M83 protein) [Homo sapiens]
Length = 766
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 293 FACRRTVRPSLATPSRGSPCSVSLGHPRTVSFCRRRIVCRHA 168
F R+ + + SRGSP VSL R C CR+A
Sbjct: 487 FGLRQLIDSNTPAASRGSPTLVSLSLERCPRGCSSYGQCRYA 528
>At2g46060.1 68415.m05729 transmembrane protein-related contains
weak similarity to Swiss-Prot:Q9HCN3 transmembrane
protein 8 precursor (M83 protein) [Homo sapiens]
Length = 807
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 293 FACRRTVRPSLATPSRGSPCSVSLGHPRTVSFCRRRIVCRHA 168
F R+ + + SRGSP VSL R C CR+A
Sbjct: 487 FGLRQLIDSNTPAASRGSPTLVSLSLERCPRGCSSYGQCRYA 528
>At1g05690.1 68414.m00590 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger;
similar to p300/CBP acetyltransferase-related protein
(GI:12597461) [Arabidopsis thaliana]; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 364
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 197 CRRRIVCRHASRTWTLLEFWAGAC 126
C+ R C H R W LL+ + C
Sbjct: 287 CKSRASCSHCKRMWQLLQLHSCIC 310
>At1g05100.1 68414.m00513 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 339
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 302 VAPFACRRTVRPSLATPSRGSP 237
+A F C + V P + P RG+P
Sbjct: 147 IADFGCAKWVEPEITEPVRGTP 168
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.125 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,870,573
Number of Sequences: 28952
Number of extensions: 100861
Number of successful extensions: 535
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 801831960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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