Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30270
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 169 1e-44
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 24 0.81
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 1.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 1.9
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 2.5
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 3.3
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 4.3
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 4.3
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 4.3
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 4.3
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 4.3
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 5.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 5.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 5.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 5.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 5.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 5.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 5.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 5.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 5.7
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 5.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 5.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 5.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 5.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 5.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 5.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 5.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 5.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 7.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 7.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 7.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 7.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 7.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 7.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 7.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 7.5
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 7.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.5
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 10.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 10.0
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 169 bits (412), Expect = 1e-44
Identities = 76/149 (51%), Positives = 108/149 (72%)
Frame = +3
Query: 66 IFYPLLGLTTAIWILYRWQQNSHMHKLAELIPGPAPIPIFGNALTLMRKDPHELVNLALG 245
+F LL ++ +Y H+ +LAE IPGP +P+ GNAL L P + + L
Sbjct: 14 VFLSLLIPALILYFIYFRISRRHLLELAEKIPGPPALPLIGNALDLFGS-PDAMFSQVLK 72
Query: 246 YAQTFGNVVRVWLGSKLIVFLADADDIEIILNSHVHIDKATEYKFFKPWLGEGLLISSGP 425
A+ F +VV++W+G KL++ L D D+EIIL+S+V+IDK+TEY+FFKPWLG+GLLIS+G
Sbjct: 73 KAENFKDVVKIWVGPKLVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQ 132
Query: 426 KWRSHRKMIAPTFHINILKSFVGIFNQNS 512
KWR+HRK+IAPTFH+N+LKSF+ +FN N+
Sbjct: 133 KWRNHRKLIAPTFHLNVLKSFIDLFNANA 161
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 24.2 bits (50), Expect = 0.81
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 69 FYPLLGLTTAIWILYRWQQNSHMHKLAELIPGPAPIPIFGNA--LTLMRKDPHELV 230
F L G+ LY + ++ + + GP P+P FG L L++K V
Sbjct: 5 FEILCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFV 60
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.8 bits (49), Expect = 1.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 109 YIDGNRTHICTNLLN*YLDRHLFRFSEM 192
YIDGN +C N +N ++ HL +M
Sbjct: 799 YIDGNVVFVCHNGMN-WMPTHLNALLDM 825
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 456 PTFHINILKSFVG 494
PT+ +NILKS VG
Sbjct: 126 PTWEVNILKSIVG 138
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 65 DILSSTWTYHSNMD 106
D STW YH N++
Sbjct: 1671 DTEMSTWGYHHNVN 1684
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 141 KLAELIPGPAPIPIFG 188
K +PGP +PIFG
Sbjct: 48 KTVSKVPGPFSLPIFG 63
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 87 LTTAIWILYRWQQNSHMHKLAE 152
LTT +W+ + WQ + AE
Sbjct: 67 LTTNVWLEHEWQDHKFQWDPAE 88
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 22.2 bits (45), Expect = 3.3
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 10 VK*RAWWMRPRD 45
+K + WW RPR+
Sbjct: 40 IKRKRWWSRPRE 51
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P PIPI+ GN
Sbjct: 330 EQIPVPVPIPIYCGN 344
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P PIPI+ GN
Sbjct: 341 EQIPVPVPIPIYCGN 355
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P PIPI+ GN
Sbjct: 341 EQIPVPVPIPIYCGN 355
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P PIPI+ GN
Sbjct: 330 EQIPVPVPIPIYCGN 344
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.8 bits (44), Expect = 4.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 151 SASLCICEFCCHLYR 107
S +L +CEFC YR
Sbjct: 32 SDTLYVCEFCNRRYR 46
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 114 EQIPVPVPVPIYCGN 128
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 114 EQIPVPVPVPIYCGN 128
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 117 EQIPVPVPVPIYCGN 131
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 117 EQIPVPVPVPIYCGN 131
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 117 EQIPVPVPVPIYCGN 131
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 117 EQIPVPVPVPIYCGN 131
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 117 EQIPVPVPVPIYCGN 131
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 117 EQIPVPVPVPIYCGN 131
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 117 EQIPVPVPVPIYCGN 131
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 120 EQIPVPVPVPIYCGN 134
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 125 EQIPVPVPVPIYCGN 139
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 331 EQIPVPVPVPIYCGN 345
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 342 EQIPVPVPVPIYCGN 356
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 360 EQIPVPVPVPIYCGN 374
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPI-FGN 191
E IP P P+PI +GN
Sbjct: 334 EQIPVPVPVPIYYGN 348
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 352 EQIPVPVPVPIYCGN 366
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 359 EQIPVPVPVPIYCGN 373
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 362 EQIPVPVPVPIYCGN 376
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 119 EQIPIPVPVPIYCGN 133
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 119 EQIPIPVPVPIYCGN 133
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 119 EQIPIPVPVPIYCGN 133
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 119 EQIPIPVPVPIYCGN 133
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+P++ GN
Sbjct: 116 EQIPVPVPVPVYCGN 130
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 117 EQIPIPVPVPIYCGN 131
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+P++ GN
Sbjct: 120 EQIPVPVPVPVYCGN 134
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+P++ GN
Sbjct: 120 EQIPVPVPVPVYCGN 134
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 150 ELIPGPAPIPIF-GN 191
E IP P P+PI+ GN
Sbjct: 334 EQIPIPVPVPIYCGN 348
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 369 EYKFFKPWLGEGLLISSGPKWR 434
EY+++ E +L+ SGP+ R
Sbjct: 268 EYRWYAQTGSEPMLVLSGPRTR 289
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 369 EYKFFKPWLGEGLLISSGPKWR 434
EY+++ E +L+ SGP+ R
Sbjct: 268 EYRWYAQTGSEPMLVLSGPRTR 289
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 420 GPKWRSHRKMI 452
GPK+ SH K+I
Sbjct: 521 GPKYDSHHKLI 531
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 420 GPKWRSHRKMI 452
GPK+ SH K+I
Sbjct: 521 GPKYDSHHKLI 531
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,433
Number of Sequences: 438
Number of extensions: 3845
Number of successful extensions: 45
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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