Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30265
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 61 6e-10
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 48 6e-06
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 40 0.001
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2) 29 2.3
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 29 3.0
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20) 28 5.3
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 6.9
SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 27 9.2
SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38) 27 9.2
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 60.9 bits (141), Expect = 6e-10
Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +3
Query: 171 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 350
S S++ LA L + G T ++ K FP D + ++ + + G ++ MAN+
Sbjct: 33 SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92
Query: 351 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDL 515
++ G ++ E F S++ F++++ +D+ KN+ A+ ++N WVE+ T ++IK+L
Sbjct: 93 LFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNL 148
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 47.6 bits (108), Expect = 6e-06
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Frame = +3
Query: 195 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 362
L + L S G T ++ G+ + + T K L S G E+++ NK++ H
Sbjct: 5 LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64
Query: 363 DGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDL 515
D ++ E F +R+ ++S++ +DF +K A K +N WV + T IK+L
Sbjct: 65 DEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKEL 116
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 330 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRI 506
E+ +AN +++ + + F + + +++D+ +D+ + A K +N WVEE T +I
Sbjct: 49 EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108
Query: 507 KDL 515
DL
Sbjct: 109 CDL 111
>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
Length = 641
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 372 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDW---VEENTNNRIKD 512
K +E+ + S +F+ + +N+DFS + ++ DW VE N ++D
Sbjct: 460 KFEEDLRISS--MFSGEGENVDFSTDLYPTGNVEDWLLEVENTMRNSLRD 507
>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 595
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 57 AMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDG 224
+MAAV + +L+ + + + ++KNN +S+ AF+ L L L L+S+G
Sbjct: 36 SMAAVCRPAGLLEPDHFALPVAVESLILKNNSIRSIAKGAFNGLDKLLTLDLSSNG 91
>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 640
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 65 CHCRDGDSKQTNDCL 21
CHCRDG+S Q N+ +
Sbjct: 336 CHCRDGESVQVNNAM 350
>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
Length = 672
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 222 HQKLKLTEREEAAPKMPRGQRFSL 151
HQ L + E + ++PK PR +F L
Sbjct: 56 HQNLSINEMDSSSPKRPRQHQFGL 79
>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 222 HQKLKLTEREEAAPKMPRGQRFSL 151
HQ L + E + ++PK PR +F L
Sbjct: 21 HQNLSINEMDSSSPKRPRQHQFGL 44
>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 222 HQKLKLTEREEAAPKMPRGQRFSL 151
HQ L + E + ++PK PR +F L
Sbjct: 50 HQNLSINEMDSSSPKRPRQHQFGL 73
>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 222 HQKLKLTEREEAAPKMPRGQRFSL 151
HQ L + E + ++PK PR +F L
Sbjct: 21 HQNLSINEMDSSSPKRPRQHQFGL 44
>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 222 HQKLKLTEREEAAPKMPRGQRFSL 151
HQ L + E + ++PK PR +F L
Sbjct: 7 HQNLSINEMDSSSPKCPRQHQFGL 30
>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 1541
Score = 27.5 bits (58), Expect = 6.9
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 365 WWKTRREFCSRFQGRLQFGRPK 430
W + RRE+C++ Q R ++ +P+
Sbjct: 1275 WLRWRREYCTQLQSRQKWNKPQ 1296
>SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 222 HQKLKLTEREEAAPKMPRGQRF 157
H+ L + ER+ ++PK PR +F
Sbjct: 21 HENLSINERDSSSPKRPRQHQF 42
>SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 138 VKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAI 278
++ P S VLS S PPL + + T + + I PD++A+
Sbjct: 221 IELGPQSSGVLSLTSDPPPLEAMGKEGEAHTDSGVEEEIDIPDEEAV 267
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 396 VSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKD 512
V+ +VF++DV ++DFS + ++ +E +N ++D
Sbjct: 713 VNDEVFDTDVIDVDFSGDMAGKGKVSGNADEVSNVEVRD 751
>SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38)
Length = 501
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 113 EVIVSIFEHIREICDGCH 60
+VI++ +EH + CDGCH
Sbjct: 356 DVIIARYEHNKCRCDGCH 373
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,176,401
Number of Sequences: 59808
Number of extensions: 301357
Number of successful extensions: 1015
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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