Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30264
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1194 + 28305388-28305472,28305603-28305682,28305771-283058... 76 2e-14
02_01_0436 - 3166764-3166949,3167115-3167258,3167343-3167469,316... 75 3e-14
04_04_1528 + 34172149-34172233,34172335-34172414,34172621-341726... 48 6e-06
06_03_0588 + 22567820-22570802,22570917-22571269 35 0.045
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 34 0.059
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439... 30 0.96
11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502... 30 1.3
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 29 2.2
11_06_0702 + 26432798-26432890,26434021-26434416 28 3.9
10_08_0979 - 22000645-22000923,22000991-22001896 28 5.1
09_04_0748 + 19901687-19902460 28 5.1
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 28 5.1
08_01_0099 + 709377-709493,710055-710099,710482-710553,712413-71... 27 6.8
07_03_0563 - 19542116-19542217,19542631-19542712,19543823-195445... 27 6.8
01_06_1145 - 34883948-34884168,34884283-34884573,34884625-34885117 27 6.8
08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895 27 8.9
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 27 8.9
>06_03_1194 +
28305388-28305472,28305603-28305682,28305771-28305839,
28305936-28305993,28306082-28306134,28306229-28306271,
28306360-28306421,28306914-28307027,28307183-28307285,
28307377-28307426,28308138-28308266,28308340-28308591,
28308684-28308763,28309040-28309166,28309247-28309390,
28309849-28310034
Length = 544
Score = 75.8 bits (178), Expect = 2e-14
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +1
Query: 118 VLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYLTG 297
V+ LK+LY +KPLE YK+ D + + + +KP+V+ +G +S GK++ + +L
Sbjct: 159 VIDGLKKLYIEKLKPLEVTYKFNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLR 218
Query: 298 LEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLA--ADWTFSGLQKFGQGLEERLRG 471
+ G EP+ F ++M G D + + G +A AD FSGL FG +
Sbjct: 219 TSYP--GAHIGPEPTTDRFVVVMSGPDERTIPGNTIAVQADMPFSGLTTFGTAFLSKFEC 276
Query: 472 LKHPSKILEKVNIVE 516
+ P +LE + V+
Sbjct: 277 SQMPHPLLEHITFVD 291
>02_01_0436 -
3166764-3166949,3167115-3167258,3167343-3167469,
3167746-3167825,3167933-3168184,3168271-3168399,
3169039-3169088,3169221-3169323,3169429-3169548,
3169725-3169786,3169873-3169915,3169995-3170183,
3170299-3170367,3170460-3170539,3170648-3170723
Length = 569
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Frame = +1
Query: 118 VLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYLTG 297
V+ LKRLY +KPLE Y++ D ++ + +KP+V+ +G +S GK++ + +L
Sbjct: 184 VIDGLKRLYVEKLKPLEVAYRFNDFASPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHL-- 241
Query: 298 LEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLA--ADWTFSGLQKFGQGLEERLRG 471
L+ + G EP+ F ++M G D + + G +A AD F+GL FG +
Sbjct: 242 LQTSYPGAHVGPEPTTDRFVVVMSGSDERTIPGNTIAVQADMPFTGLTTFGGAFLSKFEC 301
Query: 472 LKHPSKILEKVNIVE 516
+ P +L+ + V+
Sbjct: 302 SQMPHPLLDHITFVD 316
>04_04_1528 +
34172149-34172233,34172335-34172414,34172621-34172689,
34172780-34172837,34173296-34173357,34173441-34173554,
34173862-34173964,34174085-34174134,34174335-34174724,
34174918-34175244,34175360-34175689
Length = 555
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/89 (25%), Positives = 45/89 (50%)
Frame = +1
Query: 103 RSADIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIV 282
RS ++ LK+ Y ++PLE Y++ D + + +KP+V+ +G +S GK++ +
Sbjct: 122 RSVTSIIDGLKKSYIEKLRPLEKTYQFDDFVSPLLTSSDFDAKPMVMLLGQYSTGKTTFI 181
Query: 283 NYLTGLEFTEWSLRTGAEPSPAYFNILMH 369
+L + G EP+ F ++ H
Sbjct: 182 KHLLKTNYP--GAHIGPEPTTDRFVVITH 208
>06_03_0588 + 22567820-22570802,22570917-22571269
Length = 1111
Score = 34.7 bits (76), Expect = 0.045
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +1
Query: 4 LTGEIPENLRSREHINQILRLDEEAS-EAEITVERSADIVLRDLK-RLYENSIKPLEGL- 174
LTGEIPE+L S + + ++ ++ S + + + + ++ DLK + SI P+ +
Sbjct: 209 LTGEIPESLASSKSLQVLVLMNNALSGQLPVALFNCSSLIDLDLKHNSFLGSIPPITAIS 268
Query: 175 --YKYRDLSNRHF 207
KY DL + HF
Sbjct: 269 LQMKYLDLEDNHF 281
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 34.3 bits (75), Expect = 0.059
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Frame = +1
Query: 31 RSREHINQI-LRLDE-EASEAEITVERSADIVLRDLKRLYENSIKPLEGLYKYRDLSNRH 204
R R+ ++Q+ + L + E + +E + R L L +I LEGL SN+
Sbjct: 123 RFRDRLDQVGIELPKIEVRYQHLDIEADVHVGKRALPTLLNATINTLEGLVSLFISSNKR 182
Query: 205 ----FGDPEIFSKP--LVLFMGPWSGGKSSIVNYLTG 297
D KP + L +GP S GKS+++ LTG
Sbjct: 183 KLKILNDVNGIIKPSRMTLLLGPPSSGKSTLMRALTG 219
>12_02_1032 +
25542420-25542573,25543511-25543577,25543816-25543918,
25544435-25544505,25544639-25544702,25545260-25545316,
25545435-25545593,25545967-25546035,25546111-25546202,
25546579-25546657,25546923-25547088,25547480-25547604,
25547737-25548078,25548271-25548432,25548520-25548624,
25548766-25548860,25548948-25549044,25549848-25550165,
25550228-25550296
Length = 797
Score = 30.3 bits (65), Expect = 0.96
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 226 SKPLVLFMGPWSGGKSSIVNYLTGLEFTE 312
S +V MGP S GKS+++N L G F E
Sbjct: 39 SYAVVSIMGPQSSGKSTLLNQLFGTNFRE 67
>11_06_0197 +
21149453-21149630,21149930-21149996,21150142-21150244,
21150901-21150971,21151091-21151154,21151239-21151304,
21151416-21151463,21151544-21151606,21151680-21151736,
21151884-21151950,21151969-21152042,21152176-21152244,
21152323-21152414,21152782-21152860,21153233-21153398,
21153826-21153950,21154089-21154351,21154473-21154569,
21154659-21154820,21154904-21155008,21155935-21156180
Length = 753
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 226 SKPLVLFMGPWSGGKSSIVNYLTGLEFTEWSLRTG 330
S +V +GP GKS+++N L G FTE G
Sbjct: 47 SYAVVSIVGPQGSGKSTLLNQLFGTSFTEMDALKG 81
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 100 ERSADIVLRDLKRLYENSIKPLEGLYKYRDL-SNRHFGDPEIFSKPLVLFMGPWSGGKSS 276
E+ ++ R L+ K LE + K+R L NR P P+V +G + GKS+
Sbjct: 213 EKQIEVDKRILRTQISALRKELESVRKHRKLYRNRRQSVPI----PVVSLVGYTNAGKST 268
Query: 277 IVNYLTGLE 303
++N LTG +
Sbjct: 269 LLNRLTGAD 277
>11_06_0702 + 26432798-26432890,26434021-26434416
Length = 162
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 367 HGKDPQVLDGTQ--LAADWTFSGLQKFGQGLEERLRGLKHPSKILE 498
HG+ P G + DW K G G+EE G+K P ILE
Sbjct: 115 HGRRPWKAAGEDAGVPGDWGHDSRGKLG-GIEEDSMGIKTPESILE 159
>10_08_0979 - 22000645-22000923,22000991-22001896
Length = 394
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 377 ILKFWTVRNWPPIGRSLACRSLVKDW 454
+ + W +R+ P+ R+L CR L + W
Sbjct: 33 VCRLWRLRSVDPLSRALDCRFLPRRW 58
>09_04_0748 + 19901687-19902460
Length = 257
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 313 WSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD 414
W ++ G P PAYF+++M + DG +LA D
Sbjct: 201 WFIKVGPGPYPAYFDLVM-----KQFDGLELADD 229
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 67 DEEASEAEITVERSADIVLRDLKRLYE 147
DEE +EAE+ VE +V+ D + YE
Sbjct: 79 DEEEAEAEVVVEEEEVVVVEDEEEEYE 105
>08_01_0099 +
709377-709493,710055-710099,710482-710553,712413-712484,
712763-712839,713040-713169,713250-713360,713443-713568
Length = 249
Score = 27.5 bits (58), Expect = 6.8
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +1
Query: 22 ENLRSREHINQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLEGLYKYRDLSNR 201
E +R+ E ++LD + +A + + L + L E IK LE L L R
Sbjct: 58 EWVRAEEDCRTAIQLDSHSVKAHYML----GLALLNKDELAEG-IKELEKLQLKFCL--R 110
Query: 202 HFGDPEIFSKPLVLFMGPWSGG--KSSIVNY 288
HF D IF+ P+V G W G K ++ NY
Sbjct: 111 HFTDDPIFTNPVV---GAWKGEACKEALRNY 138
>07_03_0563 -
19542116-19542217,19542631-19542712,19543823-19544595,
19545207-19545296,19545612-19545689,19546112-19546207,
19546285-19546365,19546587-19546787,19546875-19546967,
19547052-19547116,19547684-19547715,19548844-19548956
Length = 601
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 43 HINQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLEGLYKYRDL 192
H N I +D EAS AE+ V+ + L DLK + + G Y+ R++
Sbjct: 542 HFNYIFYVDFEASTAEVRVQNA----LNDLKVQQRATFLRVLGCYQMREV 587
>01_06_1145 - 34883948-34884168,34884283-34884573,34884625-34885117
Length = 334
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 235 LVLFMGPWSGGKSSIVNYLTGL---EFTEWSLRTGAEPSPAYFNILMHGKDPQVL 390
LVL G S GKS I N LTG EF E GAE +L+ G+ V+
Sbjct: 100 LVLRFGGVSLGKSGISNGLTGARAREFGELGRDDGAEEGAELRPLLVTGRPMDVM 154
>08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895
Length = 227
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 145 ENSIKPLEGLYKYRDLSNRHFGDPEIFSKP 234
EN + LE ++ + + +RHFG+ FS P
Sbjct: 127 ENELAILEFIHLFVETMDRHFGNVVFFSNP 156
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 217 EIFSKPLVLFMGPWSGGKSSIVNYLTGLEFTEWSLRTG 330
E+ K +L MGP GK+S++ L GL W+ TG
Sbjct: 1403 ELKEKDHLLVMGPSGSGKTSLLRALAGL----WTSGTG 1436
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.138 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,739,742
Number of Sequences: 37544
Number of extensions: 285078
Number of successful extensions: 750
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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