Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30264
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor med... 82 3e-16
AF357878-1|AAK27716.1| 589|Caenorhabditis elegans receptor-medi... 80 8e-16
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 80 8e-16
AF357876-1|AAK27714.1| 576|Caenorhabditis elegans receptor-medi... 80 8e-16
AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor med... 80 8e-16
AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor med... 80 8e-16
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 80 8e-16
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 80 8e-16
AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor med... 80 8e-16
Z81117-12|CAB03320.2| 345|Caenorhabditis elegans Hypothetical p... 37 0.010
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 30 1.1
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 30 1.1
U39650-5|AAK39185.2| 632|Caenorhabditis elegans Hypothetical pr... 29 2.0
U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosy... 28 3.4
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 28 4.6
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 4.6
>AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform e protein.
Length = 613
Score = 81.8 bits (193), Expect = 3e-16
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Frame = +1
Query: 10 GEIPENLRSREHINQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLEGLYKYRD 189
GEI E + ++ + L ++S+ + + + V L+++Y+ + PLE +K+ D
Sbjct: 45 GEIEEGQKKKKTRSMFSWLGGDSSKKKN--KEVLETVSEGLRKIYKQKLLPLEEFHKFHD 102
Query: 190 LSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYLTGLEFTEWSLRTGAEPSPAYFNILMH 369
+ DP+ +KP++L +G +S GK++ + YL +F +R G EP+ F +MH
Sbjct: 103 FHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYLLESDFP--GIRIGPEPTTDRFIAVMH 160
Query: 370 GKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERLRGLKHPSKILEKVNIVE 516
G + + G L D F L FG R + P+++LE V IV+
Sbjct: 161 GDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRFQCSTLPNQVLESVTIVD 211
>AF357878-1|AAK27716.1| 589|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform I protein.
Length = 589
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 112 DIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYL 291
+ V L+++Y+ + PLE +K+ D + DP+ +KP++L +G +S GK++ + YL
Sbjct: 53 ETVSEGLRKIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYL 112
Query: 292 TGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERL 465
+F +R G EP+ F +MHG + + G L D F L FG R
Sbjct: 113 LESDFP--GIRIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRF 170
Query: 466 RGLKHPSKILEKVNIVE 516
+ P+++LE V IV+
Sbjct: 171 QCSTLPNQVLESVTIVD 187
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 112 DIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYL 291
+ V L+++Y+ + PLE +K+ D + DP+ +KP++L +G +S GK++ + YL
Sbjct: 299 ETVSEGLRKIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYL 358
Query: 292 TGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERL 465
+F +R G EP+ F +MHG + + G L D F L FG R
Sbjct: 359 LESDFP--GIRIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRF 416
Query: 466 RGLKHPSKILEKVNIVE 516
+ P+++LE V IV+
Sbjct: 417 QCSTLPNQVLESVTIVD 433
>AF357876-1|AAK27714.1| 576|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform IV protein.
Length = 576
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 112 DIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYL 291
+ V L+++Y+ + PLE +K+ D + DP+ +KP++L +G +S GK++ + YL
Sbjct: 35 ETVSEGLRKIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYL 94
Query: 292 TGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERL 465
+F +R G EP+ F +MHG + + G L D F L FG R
Sbjct: 95 LESDFP--GIRIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRF 152
Query: 466 RGLKHPSKILEKVNIVE 516
+ P+++LE V IV+
Sbjct: 153 QCSTLPNQVLESVTIVD 169
>AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform f protein.
Length = 555
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 112 DIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYL 291
+ V L+++Y+ + PLE +K+ D + DP+ +KP++L +G +S GK++ + YL
Sbjct: 19 ETVSEGLRKIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYL 78
Query: 292 TGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERL 465
+F +R G EP+ F +MHG + + G L D F L FG R
Sbjct: 79 LESDFP--GIRIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRF 136
Query: 466 RGLKHPSKILEKVNIVE 516
+ P+++LE V IV+
Sbjct: 137 QCSTLPNQVLESVTIVD 153
>AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform d protein.
Length = 576
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 112 DIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYL 291
+ V L+++Y+ + PLE +K+ D + DP+ +KP++L +G +S GK++ + YL
Sbjct: 35 ETVSEGLRKIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYL 94
Query: 292 TGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERL 465
+F +R G EP+ F +MHG + + G L D F L FG R
Sbjct: 95 LESDFP--GIRIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRF 152
Query: 466 RGLKHPSKILEKVNIVE 516
+ P+++LE V IV+
Sbjct: 153 QCSTLPNQVLESVTIVD 169
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 112 DIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYL 291
+ V L+++Y+ + PLE +K+ D + DP+ +KP++L +G +S GK++ + YL
Sbjct: 250 ETVSEGLRKIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYL 309
Query: 292 TGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERL 465
+F +R G EP+ F +MHG + + G L D F L FG R
Sbjct: 310 LESDFP--GIRIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRF 367
Query: 466 RGLKHPSKILEKVNIVE 516
+ P+++LE V IV+
Sbjct: 368 QCSTLPNQVLESVTIVD 384
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 112 DIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYL 291
+ V L+++Y+ + PLE +K+ D + DP+ +KP++L +G +S GK++ + YL
Sbjct: 299 ETVSEGLRKIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYL 358
Query: 292 TGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERL 465
+F +R G EP+ F +MHG + + G L D F L FG R
Sbjct: 359 LESDFP--GIRIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRF 416
Query: 466 RGLKHPSKILEKVNIVE 516
+ P+++LE V IV+
Sbjct: 417 QCSTLPNQVLESVTIVD 433
>AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform c protein.
Length = 589
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 112 DIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYL 291
+ V L+++Y+ + PLE +K+ D + DP+ +KP++L +G +S GK++ + YL
Sbjct: 53 ETVSEGLRKIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYL 112
Query: 292 TGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLAAD--WTFSGLQKFGQGLEERL 465
+F +R G EP+ F +MHG + + G L D F L FG R
Sbjct: 113 LESDFP--GIRIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRF 170
Query: 466 RGLKHPSKILEKVNIVE 516
+ P+++LE V IV+
Sbjct: 171 QCSTLPNQVLESVTIVD 187
>Z81117-12|CAB03320.2| 345|Caenorhabditis elegans Hypothetical
protein T06E6.5 protein.
Length = 345
Score = 36.7 bits (81), Expect = 0.010
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 79 SEAEITVERSADIVLRDLKRLY-ENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLV 240
SEA IT+++ + L+ LK+ + NSI P YR SN H EIF KPL+
Sbjct: 234 SEARITLDKISLDNLKFLKQHFTSNSINPFNIAISYRQRSNEHI--DEIFGKPLI 286
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 64 LDEEASEAEITVERSADIVLRDLKRLYENSIKPLEG-------LY--KYRDLSNRHFGDP 216
L+ EA+E + + D++ + YE+ I +G +Y ++ + +H P
Sbjct: 53 LELEAAENGVKYDEKEDLLNVQIPPKYEDQISDPDGNRMIILNIYVENFKSYAGKHILGP 112
Query: 217 EIFSKPLVLFMGPWSGGKSSIVNYL 291
F K L + +GP GKS++++ L
Sbjct: 113 --FHKNLTMILGPNGSGKSNVIDAL 135
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 64 LDEEASEAEITVERSADIVLRDLKRLYENSIKPLEG-------LY--KYRDLSNRHFGDP 216
L+ EA+E + + D++ + YE+ I +G +Y ++ + +H P
Sbjct: 53 LELEAAENGVKYDEKEDLLNVQIPPKYEDQISDPDGNRMIILNIYVENFKSYAGKHILGP 112
Query: 217 EIFSKPLVLFMGPWSGGKSSIVNYL 291
F K L + +GP GKS++++ L
Sbjct: 113 --FHKNLTMILGPNGSGKSNVIDAL 135
>U39650-5|AAK39185.2| 632|Caenorhabditis elegans Hypothetical
protein C25A11.2 protein.
Length = 632
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 10 GEIPENLRSR-EHINQIL--RLDEEASEAEITVERSADIVLRDLKRLYENSI 156
G E+L + EH+N + + E+ + EITV +DIVL L +Y S+
Sbjct: 473 GVCKEHLANNSEHLNMLFFNTVFEDCGKNEITVNEDSDIVLDALDIIYHRSL 524
>U88311-5|AAB42343.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein25 protein.
Length = 531
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/42 (23%), Positives = 28/42 (66%)
Frame = +1
Query: 43 HINQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLE 168
++ ++ + +EA + ++ V+++ D+V+ + L ++ IKPL+
Sbjct: 48 NVTFVVPVADEARKGQLGVKKTKDVVIVEQDELMKSEIKPLD 89
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 178 KYRDLSNRHFGDPEIFSKPLVLF-MGPWSGGKSSIVN-YLTGL-EFTEWSLRTGAEPSPA 348
K + L RHF +S F + P K+++ N +++GL E + +L TG + P
Sbjct: 1264 KKQSLVFRHFNTLLGYSSTEKCFTIPPARLRKAAVCNAFISGLPEILDMNLHTGNQLLPT 1323
Query: 349 YFNILMHGKDPQVLDGTQLAADWTFS 426
+L+H PQ L Q +++ +
Sbjct: 1324 VAQLLIHLPSPQKLASDQNVTNYSLA 1349
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 178 KYRDLSNRHFGDPEIFSKPLVLF-MGPWSGGKSSIVN-YLTGL-EFTEWSLRTGAEPSPA 348
K + L RHF +S F + P K+++ N +++GL E + +L TG + P
Sbjct: 45 KKQSLVFRHFNTLLGYSSTEKCFTIPPARLRKAAVCNAFISGLPEILDMNLHTGNQLLPT 104
Query: 349 YFNILMHGKDPQVLDGTQLAADWTFS 426
+L+H PQ L Q +++ +
Sbjct: 105 VAQLLIHLPSPQKLASDQNVTNYSLA 130
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 178 KYRDLSNRHFGDPEIFSKPLVLF-MGPWSGGKSSIVN-YLTGL-EFTEWSLRTGAEPSPA 348
K + L RHF +S F + P K+++ N +++GL E + +L TG + P
Sbjct: 1264 KKQSLVFRHFNTLLGYSSTEKCFTIPPARLRKAAVCNAFISGLPEILDMNLHTGNQLLPT 1323
Query: 349 YFNILMHGKDPQVLDGTQLAADWTFS 426
+L+H PQ L Q +++ +
Sbjct: 1324 VAQLLIHLPSPQKLASDQNVTNYSLA 1349
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 178 KYRDLSNRHFGDPEIFSKPLVLF-MGPWSGGKSSIVN-YLTGL-EFTEWSLRTGAEPSPA 348
K + L RHF +S F + P K+++ N +++GL E + +L TG + P
Sbjct: 45 KKQSLVFRHFNTLLGYSSTEKCFTIPPARLRKAAVCNAFISGLPEILDMNLHTGNQLLPT 104
Query: 349 YFNILMHGKDPQVLDGTQLAADWTFS 426
+L+H PQ L Q +++ +
Sbjct: 105 VAQLLIHLPSPQKLASDQNVTNYSLA 130
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 178 KYRDLSNRHFGDPEIFSKPLVLF-MGPWSGGKSSIVN-YLTGL-EFTEWSLRTGAEPSPA 348
K + L RHF +S F + P K+++ N +++GL E + +L TG + P
Sbjct: 1267 KKQSLVFRHFNTLLGYSSTEKCFTIPPARLRKAAVCNAFISGLPEILDMNLHTGNQLLPT 1326
Query: 349 YFNILMHGKDPQVLDGTQLAADWTFS 426
+L+H PQ L Q +++ +
Sbjct: 1327 VAQLLIHLPSPQKLASDQNVTNYSLA 1352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.138 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,629,820
Number of Sequences: 27780
Number of extensions: 237928
Number of successful extensions: 652
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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