Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30264
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   10.0 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   10.0 

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -1

Query: 225 EYFRVTKMTIT*VSVFVKTF*WFDRILIESFQVP 124
           +YF +    +  V +   T+ WF+++ ++ F VP
Sbjct: 243 DYFDIPNELVLEVPLSHPTYDWFEKLELKWFAVP 276


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 250 GPWSGGKSSIVNYLTGLEFTEWSLRTG 330
           GP S G SS+++  TG+++     R G
Sbjct: 294 GPNSQGPSSVIDTNTGVDYFTQINRNG 320


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 483 GVFQAPESLLQSLTKLLQARERPIGGQLRTV 391
           GVF+  E L   L  L   R RP+  +L  +
Sbjct: 108 GVFERTEPLSPHLLNLEVERWRPLRSRLSPI 138


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 118 VLRDLKRLYENSIKPLEGLYK 180
           +L++ KR+Y +   P++ +YK
Sbjct: 18  ILKNDKRIYLSPRTPIKNVYK 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.138    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,808
Number of Sequences: 438
Number of extensions: 3057
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)