Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30264
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05520.2 68417.m00839 calcium-binding EF hand family protein ... 79 1e-15
At4g05520.1 68417.m00838 calcium-binding EF hand family protein ... 79 1e-15
At3g20290.1 68416.m02571 calcium-binding EF hand family protein ... 76 1e-14
At2g06860.1 68415.m00768 Ulp1 protease family protein contains P... 36 0.021
At1g35770.1 68414.m04447 Ulp1 protease family protein contains P... 34 0.065
At4g04390.1 68417.m00627 Ulp1 protease family protein contains P... 33 0.086
At1g80080.1 68414.m09374 leucine-rich repeat family protein cont... 33 0.11
At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical ... 31 0.35
At3g05360.1 68416.m00584 disease resistance family protein / LRR... 31 0.46
At5g44900.1 68418.m05505 disease resistance protein (TIR class),... 31 0.61
At4g08340.1 68417.m01378 Ulp1 protease family protein contains P... 30 1.1
At1g72960.1 68414.m08438 root hair defective 3 GTP-binding (RHD3... 30 1.1
At4g13030.2 68417.m02034 expressed protein 29 1.4
At4g13030.1 68417.m02033 expressed protein 29 1.4
At3g42820.1 68416.m04484 hypothetical protein hypothetical prote... 29 1.4
At5g45160.1 68418.m05544 root hair defective 3 GTP-binding (RHD3... 29 1.9
At4g35120.1 68417.m04992 kelch repeat-containing F-box family pr... 28 4.3
At5g41140.1 68418.m05001 expressed protein 27 5.7
At3g04680.2 68416.m00502 pre-mRNA cleavage complex family protei... 27 5.7
At3g04680.1 68416.m00501 pre-mRNA cleavage complex family protei... 27 5.7
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 27 5.7
At1g54350.1 68414.m06196 ABC transporter family protein similar ... 27 5.7
At2g47750.1 68415.m05961 auxin-responsive GH3 family protein sim... 27 7.5
At1g51820.1 68414.m05841 leucine-rich repeat protein kinase, put... 27 9.9
>At4g05520.2 68417.m00839 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 545
Score = 79.4 bits (187), Expect = 1e-15
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Frame = +1
Query: 118 VLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYLTG 297
++ LKRLY +KPLE Y++ D ++ + +KP+V+ +G +S GK++ + +L G
Sbjct: 159 IVDGLKRLYTEKLKPLEVTYRFNDFASPVLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLG 218
Query: 298 LEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLA--ADWTFSGLQKFGQGLEERLRG 471
++ G EP+ F + M G D + + G +A AD F+GL FG +
Sbjct: 219 CDYP--GAHIGPEPTTDRFVVAMSGPDERTIPGNTMAVQADMPFNGLTSFGGAFLSKFEC 276
Query: 472 LKHPSKILEKVNIVE 516
+ P +L+++ +V+
Sbjct: 277 SQMPHPVLDQITLVD 291
>At4g05520.1 68417.m00838 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 546
Score = 79.4 bits (187), Expect = 1e-15
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Frame = +1
Query: 118 VLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVNYLTG 297
++ LKRLY +KPLE Y++ D ++ + +KP+V+ +G +S GK++ + +L G
Sbjct: 160 IVDGLKRLYTEKLKPLEVTYRFNDFASPVLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLG 219
Query: 298 LEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLA--ADWTFSGLQKFGQGLEERLRG 471
++ G EP+ F + M G D + + G +A AD F+GL FG +
Sbjct: 220 CDYP--GAHIGPEPTTDRFVVAMSGPDERTIPGNTMAVQADMPFNGLTSFGGAFLSKFEC 277
Query: 472 LKHPSKILEKVNIVE 516
+ P +L+++ +V+
Sbjct: 278 SQMPHPVLDQITLVD 292
>At3g20290.1 68416.m02571 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4 and {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 545
Score = 76.2 bits (179), Expect = 1e-14
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = +1
Query: 106 SADIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEIFSKPLVLFMGPWSGGKSSIVN 285
S ++ LKRLY +KPLE Y++ D + + + +KP+V+ +G +S GK++ +
Sbjct: 156 SVTSIVDGLKRLYIQKLKPLEVAYRFNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIK 215
Query: 286 YLTGLEFTEWSLRTGAEPSPAYFNILMHGKDPQVLDGTQLA--ADWTFSGLQKFGQGLEE 459
+L L+ T G EP+ F ++M G D + + G +A AD FSGL FG
Sbjct: 216 HL--LKSTYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFSGLTTFGTAFLS 273
Query: 460 RLRGLKHPSKILEKVNIVE 516
+ + P +LE V V+
Sbjct: 274 KFECSQMPHPLLEHVTFVD 292
>At2g06860.1 68415.m00768 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 938
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +3
Query: 342 ARLL*YPNAWKRSSSFGRYATGRRLDVLWLAEVWSRIGGATQGLETPQQNIRKGEHCG 515
ARLL +PN S+SFG + GR+L+V E+W G + I G CG
Sbjct: 52 ARLLEFPNNPAWSASFGIFILGRQLEVTKPNEIWVLFAGTPIRFSLREFKIVTGLPCG 109
>At1g35770.1 68414.m04447 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 968
Score = 33.9 bits (74), Expect = 0.065
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 342 ARLL*YPNAWKRSSSFGRYATGRRLDVLWLAEVWSRIGG 458
ARLL +PN S+SFG + GR+L+V E+W G
Sbjct: 52 ARLLEFPNNHAWSASFGIFILGRQLEVTKPNEIWVLFAG 90
>At4g04390.1 68417.m00627 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 963
Score = 33.5 bits (73), Expect = 0.086
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 348 LL*YPNAWKRSSSFGRYATGRRLDVLWLAEVWSRIGGATQGLETPQQNIRKGEHCG 515
LL +PN S++FG Y GR+LD+ E+W G + ++ G CG
Sbjct: 54 LLDFPNKPAWSTTFGLYLLGRKLDIDKANEIWVVYAGTPVRFSLREFHLVTGLACG 109
>At1g80080.1 68414.m09374 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 496
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 4 LTGEIPENLRSREHINQILRLDEEASEAEITVERSADIVLRDLKRLYENS 153
LTGEIP R +H+++ LRL++ + + ER +R RLY N+
Sbjct: 363 LTGEIPLEFRDVKHLSE-LRLNDNSLTGPVPFERDTVWRMRRKLRLYNNA 411
>At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical to
root hair defective 3 (RHD3) GI:1839188 from
[Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)
Length = 802
Score = 31.5 bits (68), Expect = 0.35
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 226 SKPLVLFMGPWSGGKSSIVNYLTGLEFTE 312
S +V MGP S GKS+++N+L G F E
Sbjct: 36 SYAVVSIMGPQSSGKSTLLNHLFGTNFRE 64
>At3g05360.1 68416.m00584 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to
elicitor-inducible LRR receptor-like protein EILP
[Nicotiana tabacum] gi|6635236|dbj|BAA88636; similar to
Cf-2.2 [Lycopersicon pimpinellifolium]
gi|1184077|gb|AAC15780
Length = 786
Score = 31.1 bits (67), Expect = 0.46
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 100 ERSADIVLRDLKR-LYENSIKPLEGLYKYRDLSNRHFGDPEIFSK 231
+ S ++V DL L NS+KP GL+K + L N D ++ +
Sbjct: 82 DESGEVVSLDLSYVLLNNSLKPTSGLFKLQQLQNLTLSDCHLYGE 126
>At5g44900.1 68418.m05505 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 274
Score = 30.7 bits (66), Expect = 0.61
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +1
Query: 34 SREHINQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLEGLY--KYRDLSNRHF 207
S+ N LDE A E + S ++ K + + +K L+G + +RDL H
Sbjct: 78 SKNFTNSRWCLDELAKIKECVDQESLTVIPIFFK-MKTDDVKKLKGNFGDNFRDLKLTHR 136
Query: 208 GDPEIFS--KPLVLFMGPWSGGKSSIVNYLTGL 300
G+PE + K +L++ +G SS Y +GL
Sbjct: 137 GEPETYRRWKDAILYVSKKTGLSSS--RYRSGL 167
>At4g08340.1 68417.m01378 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 988
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 336 TIARLL*YPNAWKRSSSFGRYATGRRLDVLWLAEVWSRIGGATQGLETPQQNIRKGEHCG 515
+ RLL +P S+SF + GR+L+V E+W G + I G CG
Sbjct: 20 SFGRLLEFPKLLAWSASFRIFILGRQLEVAKPNEIWVLFAGTPIRFSLREFKIVIGLQCG 79
>At1g72960.1 68414.m08438 root hair defective 3 GTP-binding (RHD3)
family protein contains Pfam profile: PF05879 root hair
defective 3 GTP-binding protein (RHD3)
Length = 748
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 247 MGPWSGGKSSIVNYLTGLEFTE 312
MGP S GKS+++N+L G F E
Sbjct: 1 MGPQSSGKSTLLNHLFGTNFME 22
>At4g13030.2 68417.m02034 expressed protein
Length = 479
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +1
Query: 43 HINQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEI 222
H+ + R ++ E + +S D++LR KR + + Y S+ D I
Sbjct: 47 HVTDLRRREKAYQE----ILQSHDLLLRTSKRKLRQARNEILS-YTPGSWSDVKLSDYNI 101
Query: 223 FSKPLVLFMGPWSGGKSSIVNYLT 294
++ +GP GKSS+VN +T
Sbjct: 102 PKTTSIMLVGPKGAGKSSLVNKIT 125
>At4g13030.1 68417.m02033 expressed protein
Length = 481
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +1
Query: 43 HINQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLEGLYKYRDLSNRHFGDPEI 222
H+ + R ++ E + +S D++LR KR + + Y S+ D I
Sbjct: 49 HVTDLRRREKAYQE----ILQSHDLLLRTSKRKLRQARNEILS-YTPGSWSDVKLSDYNI 103
Query: 223 FSKPLVLFMGPWSGGKSSIVNYLT 294
++ +GP GKSS+VN +T
Sbjct: 104 PKTTSIMLVGPKGAGKSSLVNKIT 127
>At3g42820.1 68416.m04484 hypothetical protein hypothetical proteins
- Arabidopsis thaliana
Length = 906
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 336 TIARLL*YPNAWKRSSSFGRYATGRRLDVLWLAEVW 443
+ RLL +P S+SFG + R+LDV+ E+W
Sbjct: 50 SFGRLLEFPKLPSLSASFGIFILDRQLDVVKPNEIW 85
>At5g45160.1 68418.m05544 root hair defective 3 GTP-binding (RHD3)
family protein contains Pfam profile: PF05879 root hair
defective 3 GTP-binding protein (RHD3) family
Length = 834
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 226 SKPLVLFMGPWSGGKSSIVNYLTGLEFTEWSLRTG 330
S +V MGP S GKS+++N+L F E G
Sbjct: 39 SYAVVAIMGPQSSGKSTLLNHLFKTSFREMDAFAG 73
>At4g35120.1 68417.m04992 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 389
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 214 PEIFSKPLVLFMGPWSGGKSSIVNYLTG 297
P++ S L GPWSGG ++ +TG
Sbjct: 248 PDVGSVDLQPITGPWSGGIEKVMKPITG 275
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 22 ENLRSR--EHINQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLEGLYKYRD 189
ENLR + + +++ + +EE + E E SAD + + +R E+ IK LEG K ++
Sbjct: 805 ENLRKQVVQVRSELEKKEEEMANLE-NREASADNITKTEQRSNEDRIKQLEGQIKLKE 861
>At3g04680.2 68416.m00502 pre-mRNA cleavage complex family protein
similar to Pre-mRNA cleavage complex II protein Clp1
(Swiss-Prot:Q92989) [Homo sapiens]
Length = 444
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 211 DPEIFSKPLVLFMGPWSGGKSSIVNYLTGLEFTEWSLRTGAEPS 342
DPE P V+ +GP GKS++ L W+ + G P+
Sbjct: 124 DPESSQGPRVIVVGPTDSGKSTLTKML-----LSWAAKQGWRPT 162
>At3g04680.1 68416.m00501 pre-mRNA cleavage complex family protein
similar to Pre-mRNA cleavage complex II protein Clp1
(Swiss-Prot:Q92989) [Homo sapiens]
Length = 444
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 211 DPEIFSKPLVLFMGPWSGGKSSIVNYLTGLEFTEWSLRTGAEPS 342
DPE P V+ +GP GKS++ L W+ + G P+
Sbjct: 124 DPESSQGPRVIVVGPTDSGKSTLTKML-----LSWAAKQGWRPT 162
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 238 VLFMGPWSGGKSSIVNYLTGL 300
VL GP S GK+S+V YL +
Sbjct: 1075 VLLQGPTSSGKTSLVKYLAAI 1095
>At1g54350.1 68414.m06196 ABC transporter family protein similar to
hypothetical ABC transporter ATP-binding protein
GI:9955395 from [Microcystis aeruginosa]
Length = 706
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 217 EIFSKPLVLFMGPWSGGKSSIVNYLTGL 300
+++ K +L MGP GK+S++ + GL
Sbjct: 453 DVYDKDHLLIMGPSGSGKTSLLRAMAGL 480
>At2g47750.1 68415.m05961 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 585
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 49 NQILRLDEEASEAEITVERSADIVLRDLKRLYENSIKPLEGLYKYR 186
N L D + E ++ ++ D+V L R YE + GLY+YR
Sbjct: 365 NGTLSFDLDDDE-QVPCDKVVDLVNVKLGRYYELVVTTFAGLYRYR 409
>At1g51820.1 68414.m05841 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase GI:1321686 from (Arabidopsis thaliana); contains
leucine rich repeat (LRR) domains, Pfam:PF00560;
contains protein kinase domain, Pfam:PF00069
Length = 885
Score = 26.6 bits (56), Expect = 9.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 284 FTILDFPPLQGPMKSTKGLENISGS 210
FT++DFP ++ G++N+ G+
Sbjct: 344 FTVIDFPQMETNENDVAGIKNVQGT 368
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.138 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,223,383
Number of Sequences: 28952
Number of extensions: 234097
Number of successful extensions: 761
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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