Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30261
(350 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 140 3e-34
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 140 3e-34
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 140 3e-34
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 140 3e-34
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 139 6e-34
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 139 6e-34
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 50 5e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 50 5e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 50 5e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 50 5e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 48 1e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 48 1e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 48 1e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 48 1e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 44 2e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 42 1e-04
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 42 2e-04
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 42 2e-04
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 42 2e-04
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 42 2e-04
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 42 2e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 41 3e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 41 3e-04
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 40 4e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 40 4e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 40 4e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 39 9e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 39 9e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 39 9e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 39 9e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 39 9e-04
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 39 0.001
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 39 0.001
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 38 0.002
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 38 0.002
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 37 0.004
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 36 0.011
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 36 0.011
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 36 0.011
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 35 0.014
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 35 0.014
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 35 0.014
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 35 0.014
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 35 0.019
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 35 0.019
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 35 0.019
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 34 0.025
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 34 0.025
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 34 0.025
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 34 0.025
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.033
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.033
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.033
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.076
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 32 0.10
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 32 0.10
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 32 0.10
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 32 0.13
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 32 0.13
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 32 0.13
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 31 0.18
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 0.18
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 31 0.18
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 31 0.18
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 31 0.18
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.31
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 31 0.31
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 31 0.31
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 0.31
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 30 0.41
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 30 0.41
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 30 0.54
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 30 0.54
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 30 0.54
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 30 0.54
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 0.54
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 1.2
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 29 1.2
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 28 1.6
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 27 2.9
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 27 2.9
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 27 2.9
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 27 2.9
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 27 2.9
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 3.8
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 27 3.8
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 27 3.8
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 27 3.8
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 27 5.0
U00033-4|AAC48305.2| 348|Caenorhabditis elegans Serpentine rece... 27 5.0
Z68114-8|CAA92162.1| 317|Caenorhabditis elegans Hypothetical pr... 26 6.6
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 26 6.6
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 26 6.6
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 26 6.6
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 26 8.7
U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol ... 26 8.7
U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol ... 26 8.7
U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol ... 26 8.7
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 26 8.7
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 140 bits (338), Expect = 3e-34
Identities = 71/117 (60%), Positives = 89/117 (76%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLK 176
G S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K
Sbjct: 249 GKSKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHK 307
Query: 177 SERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCF 344
+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GR KGFGFVCF
Sbjct: 308 AERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 364
Score = 91.5 bits (217), Expect = 2e-19
Identities = 51/116 (43%), Positives = 71/116 (61%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
G S+G+GFV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL
Sbjct: 157 GFSKGYGFVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE-------- 207
Query: 183 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
T Q N+YVKN D + E L K FA FG ITS +VM +G+ KGFGFV F++
Sbjct: 208 --TAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFAN 261
Score = 56.4 bits (130), Expect = 5e-09
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S G+ +V F+ P AERA +N E + GKP+ + +Q+ +
Sbjct: 72 SLGYAYVNFQQPADAERAMDTMNF-EALHGKPMRIMWSQR----------------DPAM 114
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCFSS 350
R N+++KNLD ID++ + F+ FG I S KV + EDG KG+GFV F +
Sbjct: 115 RRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 169
Score = 54.0 bits (124), Expect = 3e-08
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 170
G S+GFGFV FE P+ A A E+N K +V KPLYV Q+K +R+ +L ++ Q
Sbjct: 354 GRSKGFGFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIGQRKEDRRAQLASQYMQ 408
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 140 bits (338), Expect = 3e-34
Identities = 71/117 (60%), Positives = 89/117 (76%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLK 176
G S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K
Sbjct: 189 GKSKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHK 247
Query: 177 SERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCF 344
+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GR KGFGFVCF
Sbjct: 248 AERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 304
Score = 66.9 bits (156), Expect = 4e-12
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK-AERQ--------KELKRK 161
S G+ +V F+ P AERA +N E + GKP+ + +Q+ A R+ K L +
Sbjct: 72 SLGYAYVNFQQPADAERAMDTMNF-EALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKV 130
Query: 162 FE---QLKSERL-----TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGR 317
F Q +++R T Q N+YVKN D + E L K FA FG ITS +VM +G+
Sbjct: 131 FVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGK 190
Query: 318 XKGFGFVCFSS 350
KGFGFV F++
Sbjct: 191 SKGFGFVAFAN 201
Score = 56.0 bits (129), Expect = 7e-09
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKS 179
G S+GFGFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S
Sbjct: 294 GRSKGFGFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLAS 352
Query: 180 ERL 188
R+
Sbjct: 353 MRM 355
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 140 bits (338), Expect = 3e-34
Identities = 71/117 (60%), Positives = 89/117 (76%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLK 176
G S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K
Sbjct: 186 GKSKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHK 244
Query: 177 SERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCF 344
+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GR KGFGFVCF
Sbjct: 245 AERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 301
Score = 91.1 bits (216), Expect = 2e-19
Identities = 51/116 (43%), Positives = 71/116 (61%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
G S+G+GFV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL
Sbjct: 94 GFSKGYGFVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE-------- 144
Query: 183 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
T Q N+YVKN D + E L K FA FG ITS +VM +G+ KGFGFV F++
Sbjct: 145 --TAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFAN 198
Score = 56.0 bits (129), Expect = 7e-09
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKS 179
G S+GFGFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S
Sbjct: 291 GRSKGFGFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLAS 349
Query: 180 ERL 188
R+
Sbjct: 350 MRM 352
Score = 49.2 bits (112), Expect = 8e-07
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +3
Query: 207 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCFSS 350
N+++KNLD ID++ + F+ FG I S KV + EDG KG+GFV F +
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 106
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 140 bits (338), Expect = 3e-34
Identities = 71/117 (60%), Positives = 89/117 (76%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLK 176
G S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K
Sbjct: 249 GKSKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHK 307
Query: 177 SERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCF 344
+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GR KGFGFVCF
Sbjct: 308 AERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 364
Score = 91.1 bits (216), Expect = 2e-19
Identities = 51/116 (43%), Positives = 71/116 (61%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
G S+G+GFV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL
Sbjct: 157 GFSKGYGFVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE-------- 207
Query: 183 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
T Q N+YVKN D + E L K FA FG ITS +VM +G+ KGFGFV F++
Sbjct: 208 --TAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFAN 261
Score = 56.4 bits (130), Expect = 5e-09
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S G+ +V F+ P AERA +N E + GKP+ + +Q+ +
Sbjct: 72 SLGYAYVNFQQPADAERAMDTMNF-EALHGKPMRIMWSQR----------------DPAM 114
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCFSS 350
R N+++KNLD ID++ + F+ FG I S KV + EDG KG+GFV F +
Sbjct: 115 RRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 169
Score = 56.0 bits (129), Expect = 7e-09
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKS 179
G S+GFGFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S
Sbjct: 354 GRSKGFGFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLAS 412
Query: 180 ERL 188
R+
Sbjct: 413 MRM 415
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 139 bits (336), Expect = 6e-34
Identities = 72/117 (61%), Positives = 89/117 (76%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLK 176
G +GFGFVAF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK
Sbjct: 275 GKPKGFGFVAFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALK 333
Query: 177 SERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCF 344
ER+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAKVM+ E+GR KGFGFVCF
Sbjct: 334 QERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCF 390
Score = 85.0 bits (201), Expect = 1e-17
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
GNS+G+GFV FE +A+ A ++NG L+ K +YVG+ Q +A+R KEL E
Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNGM-LLSDKKVYVGKFQPRAQRMKEL--------GE 232
Query: 183 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRXKGFGFVCFS 347
+Y N++VKN + +D E+L F+ FG ITSA VM + G+ KGFGFV F+
Sbjct: 233 SGLKY--TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286
Score = 55.2 bits (127), Expect = 1e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 170
G S+GFGFV FE P+ A A ++N K ++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 380 GRSKGFGFVCFEKPEEATAAVTDMNSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
Score = 54.0 bits (124), Expect = 3e-08
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S G+ +V F+ P AERA +N E++ G+P+ + +Q+ +
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNF-EVIHGRPMRIMWSQRDPAAR--------------- 140
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRXKGFGFVCFSS 350
R N+++KNLD ID++ + F+ FG I S KV +D G KG+GFV F +
Sbjct: 141 -RAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFET 194
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 139 bits (336), Expect = 6e-34
Identities = 72/117 (61%), Positives = 89/117 (76%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLK 176
G +GFGFVAF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK
Sbjct: 275 GKPKGFGFVAFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALK 333
Query: 177 SERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRXKGFGFVCF 344
ER+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAKVM+ E+GR KGFGFVCF
Sbjct: 334 QERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCF 390
Score = 85.0 bits (201), Expect = 1e-17
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
GNS+G+GFV FE +A+ A ++NG L+ K +YVG+ Q +A+R KEL E
Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNGM-LLSDKKVYVGKFQPRAQRMKEL--------GE 232
Query: 183 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRXKGFGFVCFS 347
+Y N++VKN + +D E+L F+ FG ITSA VM + G+ KGFGFV F+
Sbjct: 233 SGLKY--TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286
Score = 55.2 bits (127), Expect = 1e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 170
G S+GFGFV FE P+ A A ++N K ++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 380 GRSKGFGFVCFEKPEEATAAVTDMNSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
Score = 54.0 bits (124), Expect = 3e-08
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S G+ +V F+ P AERA +N E++ G+P+ + +Q+ +
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNF-EVIHGRPMRIMWSQRDPAAR--------------- 140
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRXKGFGFVCFSS 350
R N+++KNLD ID++ + F+ FG I S KV +D G KG+GFV F +
Sbjct: 141 -RAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFET 194
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 50.0 bits (114), Expect = 5e-07
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S+G+GFV++ + AERA ++NG+ L + + A +K Q++ E+ E
Sbjct: 62 SKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIY 120
Query: 189 TRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
+ G N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F +
Sbjct: 121 NQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDN 171
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 207 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
+++V +L +D+++LR+ F PFG ++ AKV+ + + KG+GFV +
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 50.0 bits (114), Expect = 5e-07
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S+G+GFV++ + AERA ++NG+ L + + A +K Q++ E+ E
Sbjct: 72 SKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIY 130
Query: 189 TRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
+ G N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F +
Sbjct: 131 NQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDN 181
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 207 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
+++V +L +D+++LR+ F PFG ++ AKV+ + + KG+GFV +
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 50.0 bits (114), Expect = 5e-07
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S+G+GFV++ + AERA ++NG+ L + + A +K Q++ E+ E
Sbjct: 175 SKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIY 233
Query: 189 TRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
+ G N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F +
Sbjct: 234 NQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDN 284
Score = 47.2 bits (107), Expect = 3e-06
Identities = 32/116 (27%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
G++ + FV F D A +A +N K L+ + + V A + ++Q ++
Sbjct: 81 GSNDPYAFVEFSDHGQASQALQTMN-KRLLLDREMKVNWAVEPGQQQSKIDT-------- 131
Query: 183 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
TR+ +++V +L +D+++LR+ F PFG ++ AKV+ + + KG+GFV +
Sbjct: 132 --TRH--FHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
Score = 35.1 bits (77), Expect = 0.014
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFS 347
LYV NLD T+ ++ + F G++T KV+ DG + FV FS
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIF-DGSNDPYAFVEFS 92
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 50.0 bits (114), Expect = 5e-07
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S+G+GFV++ + AERA ++NG+ L + + A +K Q++ E+ E
Sbjct: 143 SKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIY 201
Query: 189 TRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
+ G N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F +
Sbjct: 202 NQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDN 252
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 207 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
+++V +L +D+++LR+ F PFG ++ AKV+ + + KG+GFV +
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 311
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 48.4 bits (110), Expect = 1e-06
Identities = 29/97 (29%), Positives = 50/97 (51%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S+G+GFV+F + AE A +NGK + + A+K +E ++ K FEQ+ +
Sbjct: 175 SKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRD-KLTFEQVFNS-- 231
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 299
T+ ++YV N+ D LR F+ +G I ++
Sbjct: 232 TKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 18 FGFVAFEDPDAAERACIELNGKEL 89
+ FV +E + A +A +E+NGKE+
Sbjct: 274 YAFVRYEKKECATKAIMEMNGKEM 297
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 48.4 bits (110), Expect = 1e-06
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 191
RGF +V E+ A++A L + V+G+P+++ + +K + KF T
Sbjct: 632 RGFAYVVMENDQKAQQAL--LKDRVPVKGRPMFISAN----DPEKRVGFKFS-------T 678
Query: 192 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVMLEDGRXKGFGFVCFSS 350
+ ++V+N+ D+ L+ F+ FGT+TS +V +DG+ KG FV F +
Sbjct: 679 TLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDT 732
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 48.4 bits (110), Expect = 1e-06
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 6 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
N +GFGFV F + A+ A LN +L GKP+ V +A E+ ++
Sbjct: 52 NHQGFGFVEFMGEEDADYAIKILNMIKLY-GKPIKVNKASAH-EKNMDV----------- 98
Query: 186 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVM--LEDGRXKGFGFVCFSS 350
G N++V NLD +D++ L F+ FG I K+M ++ G KGF F+ F+S
Sbjct: 99 -----GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFAS 151
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKEL 89
G S+GF F+ F +A++ A +NG+ L
Sbjct: 139 GTSKGFAFINFASFEASDTALEAMNGQFL 167
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 48.4 bits (110), Expect = 1e-06
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 6 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
N +GFGFV F + A+ A LN +L GKP+ V +A E+ ++
Sbjct: 62 NHQGFGFVEFMGEEDADYAIKILNMIKLY-GKPIKVNKASAH-EKNMDV----------- 108
Query: 186 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVM--LEDGRXKGFGFVCFSS 350
G N++V NLD +D++ L F+ FG I K+M ++ G KGF F+ F+S
Sbjct: 109 -----GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFAS 161
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKEL 89
G S+GF F+ F +A++ A +NG+ L
Sbjct: 149 GTSKGFAFINFASFEASDTALEAMNGQFL 177
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 44.4 bits (100), Expect = 2e-05
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Frame = +3
Query: 18 FGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRY 197
+ FV F D + A A NG+EL+E K ++V A E + E +R+
Sbjct: 80 YAFVEFSDHNQATLALQSHNGRELLE-KEMHVTWA-------FEPREPGENRSKPETSRH 131
Query: 198 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRXKGFGFVCF 344
+++V +L ID +LR+ F FG ++ AK++ ++ + KG+GFV +
Sbjct: 132 --FHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 33.1 bits (72), Expect = 0.057
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFS 347
L+V NLD I DE L F G + AK++ E G + FV FS
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE-GLNDPYAFVEFS 86
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNG 80
+G+GFV++ + AERA E+NG
Sbjct: 173 KGYGFVSYPRREDAERAIDEMNG 195
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 41.9 bits (94), Expect = 1e-04
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
S GFGFV F A+ A ++ G EL++G L + + ++ + LKRK + K +
Sbjct: 688 SMGFGFVQFYTAFDAKTALKDMQG-ELLDGHSLELKISHRENADKGALKRKEVKQKEQG- 745
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRX---KGFGFVCFSS 350
+ L V+NL + + F FG + + ++ + G+ +GFGFV F S
Sbjct: 746 ---ECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFIS 799
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRXKGFGFVCF 344
L VKNL T +++LRK F +G I+ A + ++G+ +GF FV F
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGF 50
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 161
RGFGFV F D A RA L + G+ L + A K E +EL+ K
Sbjct: 790 RGFGFVDFISADEAHRAFDSLVHSTHLYGRRLVLEWA-KDDETVEELREK 838
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRXKGFGFVCF 344
L+++NL ++ L+ F +G ++ +V+++ G KGF V F
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 41.5 bits (93), Expect = 2e-04
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 63 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 116
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
YV + + ++ L + F +GT+T ++++L+ + +GFGFV F
Sbjct: 117 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCFS 347
++V L D+ +R+ ++ FG IT VM + R +GFGFV FS
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 72
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
RGFGFV F+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 155 RGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 210
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 41.5 bits (93), Expect = 2e-04
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 25 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 78
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
YV + + ++ L + F +GT+T ++++L+ + +GFGFV F
Sbjct: 79 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
RGFGFV F+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 117 RGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 172
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 252 LRKEFAPFGTITSAKVMLEDG--RXKGFGFVCFS 347
+R+ ++ FG IT VM + R +GFGFV FS
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 34
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 41.5 bits (93), Expect = 2e-04
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 25 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 78
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
YV + + ++ L + F +GT+T ++++L+ + +GFGFV F
Sbjct: 79 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
RGFGFV F+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 117 RGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 172
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 252 LRKEFAPFGTITSAKVMLEDG--RXKGFGFVCFS 347
+R+ ++ FG IT VM + R +GFGFV FS
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 34
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 41.5 bits (93), Expect = 2e-04
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 63 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 116
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
YV + + ++ L + F +GT+T ++++L+ + +GFGFV F
Sbjct: 117 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCFS 347
++V L D+ +R+ ++ FG IT VM + R +GFGFV FS
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 72
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
RGFGFV F+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 155 RGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 210
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 41.5 bits (93), Expect = 2e-04
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
SRGFGFV F + A + +++GK + K+A + + R + ++RL
Sbjct: 63 SRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL 116
Query: 189 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCF 344
YV + + ++ L + F +GT+T ++++L+ + +GFGFV F
Sbjct: 117 --------YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCFS 347
++V L D+ +R+ ++ FG IT VM + R +GFGFV FS
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 72
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
RGFGFV F+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 155 RGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 210
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 120 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 299
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 300 MLE--DGRXKGFGFVCFSS 350
++ + K FGFV + +
Sbjct: 461 FVDRATNQSKCFGFVSYDN 479
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 120 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 299
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 300 MLE--DGRXKGFGFVCFSS 350
++ + K FGFV + +
Sbjct: 461 FVDRATNQSKCFGFVSYDN 479
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQK 146
S+GFGFV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 64
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQK 146
S+GFGFV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 182
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFV 338
L+V N+ + L F G + +++ + KGFGFV
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFV 144
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQK 146
S+GFGFV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 182
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFV 338
L+V N+ + L F G + +++ + KGFGFV
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFV 144
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 39.5 bits (88), Expect = 7e-04
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
G S G+GFV + + A RA NG L + K +K + + ++
Sbjct: 80 GQSLGYGFVNYVREEDALRAVSSFNGLRL----------------QNKTIKVSYARPSND 123
Query: 183 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRXKGFGFVCF 344
++ +G NLYV + ++ L F PFG I +++++ ++ G KG GFV F
Sbjct: 124 QI---KGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNG 80
G S+G GFV F+ D A+ A LNG
Sbjct: 166 GLSKGVGFVRFDKKDEADVAIKTLNG 191
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 39.1 bits (87), Expect = 9e-04
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 201 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRXKGFGFVCFSS 350
G NL++ +L D L FAPFG I SAKV ++ K FGFV + +
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 385
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.1 bits (87), Expect = 9e-04
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 201 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRXKGFGFVCFSS 350
G NL++ +L D L FAPFG I SAKV ++ K FGFV + +
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEG--KPLYVGRAQKKAERQKELKRK 161
G SRG FV F + A A E++ + +EG PL V A ++ K++K K
Sbjct: 179 GKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.1 bits (87), Expect = 9e-04
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 201 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRXKGFGFVCFSS 350
G NL++ +L D L FAPFG I SAKV ++ K FGFV + +
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEG--KPLYVGRAQKKAERQKELKRK 161
G SRG FV F + A A E++ + +EG PL V A ++ K++K K
Sbjct: 179 GKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.1 bits (87), Expect = 9e-04
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 201 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRXKGFGFVCFSS 350
G NL++ +L D L FAPFG I SAKV ++ K FGFV + +
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 478
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEG--KPLYVGRAQKKAERQKELKRK 161
G SRG FV F + A A E++ + +EG PL V A ++ K++K K
Sbjct: 179 GKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.1 bits (87), Expect = 9e-04
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 201 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRXKGFGFVCFSS 350
G NL++ +L D L FAPFG I SAKV ++ K FGFV + +
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEG--KPLYVGRAQKKAERQKELKRK 161
G SRG FV F + A A E++ + +EG PL V A ++ K++K K
Sbjct: 179 GKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQK 146
S+GFGFV E P AERA EL+G ++EG+ + V A + +K
Sbjct: 191 SKGFGFVTMERPQDAERARQELHG-SMIEGRKIEVNCATARVHSKK 235
Score = 33.1 bits (72), Expect = 0.057
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFV 338
L+V N+ D L+ F FG ++ +++ + KGFGFV
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFV 197
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQK 146
S+GFGFV E P AERA EL+G ++EG+ + V A + +K
Sbjct: 191 SKGFGFVTMERPQDAERARQELHG-SMIEGRKIEVNCATARVHSKK 235
Score = 33.1 bits (72), Expect = 0.057
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFV 338
L+V N+ D L+ F FG ++ +++ + KGFGFV
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFV 197
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 128
G RGF F+ F + +A+RA ++NG E G+PL V A K
Sbjct: 43 GRPRGFAFIEFAEEGSAQRAVEQMNGAEF-NGRPLRVNLANK 83
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 37.9 bits (84), Expect = 0.002
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKEL-VEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
+RGFGF+ F DP + ++ LN +E ++GK + K K + K
Sbjct: 85 ARGFGFITFVDPSSVDKV---LNNREHELDGKKI-----DPKVAFPKRTQAKL------- 129
Query: 186 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCFSS 350
+T+ + V ++ L T E +++ F +G + A +M + R +GFGFV F S
Sbjct: 130 VTKTKKV--FIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDS 184
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 131
RGFGFV F+ + A++ C E++ E + GK + +AQ K
Sbjct: 175 RGFGFVTFDSDEVADKVC-EIHFHE-INGKMVECKKAQPK 212
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 37.9 bits (84), Expect = 0.002
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKEL-VEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
+RGFGF+ F DP + ++ LN +E ++GK + K K + K
Sbjct: 85 ARGFGFITFVDPSSVDKV---LNNREHELDGKKI-----DPKVAFPKRTQAKL------- 129
Query: 186 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RXKGFGFVCFSS 350
+T+ + V ++ L T E +++ F +G + A +M + R +GFGFV F S
Sbjct: 130 VTKTKKV--FIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDS 184
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 131
RGFGFV F+ + A++ C E++ E + GK + +AQ K
Sbjct: 175 RGFGFVTFDSDEVADKVC-EIHFHE-INGKMVECKKAQPK 212
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 37.1 bits (82), Expect = 0.004
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 198 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRXKGFGFVCFSS 350
Q V+L V +D DE +K F GT+ ++ + DG KGFGFV SS
Sbjct: 171 QPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS 222
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKEL 152
RGF FV +AAER I G V G + + AQ + E + +
Sbjct: 302 RGFAFVTLSSAEAAER--IVSKGSLTVNGLSVGLSIAQPREENNQSV 346
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
G RG GFV +ED ++A+R +G+ +V + + V K KR Q S+
Sbjct: 181 GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGSTYWKRPQSQSHSQ 240
Query: 183 R 185
R
Sbjct: 241 R 241
Score = 33.1 bits (72), Expect = 0.057
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 6 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
+SRGFGFV F +AE A + K + GK + RA + + + F +
Sbjct: 88 HSRGFGFVTFASIFSAESAMNDRPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA- 144
Query: 186 LTRYQGVNLYVKNLDDTIDD-ERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCF 344
G L + + + + + LR F FGT+ +++ G+ +G GFV +
Sbjct: 145 ----PGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL---GQPRGLGFVIY 191
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
G RG GFV +ED ++A+R +G+ +V + + V K KR Q S+
Sbjct: 201 GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGSTYWKRPQSQSHSQ 260
Query: 183 R 185
R
Sbjct: 261 R 261
Score = 33.1 bits (72), Expect = 0.057
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 6 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
+SRGFGFV F +AE A + K + GK + RA + + + F +
Sbjct: 108 HSRGFGFVTFASIFSAESAMNDRPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA- 164
Query: 186 LTRYQGVNLYVKNLDDTIDD-ERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCF 344
G L + + + + + LR F FGT+ +++ G+ +G GFV +
Sbjct: 165 ----PGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL---GQPRGLGFVIY 211
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 182
G RG GFV +ED ++A+R +G+ +V + + V K KR Q S+
Sbjct: 202 GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGSTYWKRPQSQSHSQ 261
Query: 183 R 185
R
Sbjct: 262 R 262
Score = 33.1 bits (72), Expect = 0.057
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 6 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
+SRGFGFV F +AE A + K + GK + RA + + + F +
Sbjct: 109 HSRGFGFVTFASIFSAESAMNDRPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA- 165
Query: 186 LTRYQGVNLYVKNLDDTIDD-ERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCF 344
G L + + + + + LR F FGT+ +++ G+ +G GFV +
Sbjct: 166 ----PGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL---GQPRGLGFVIY 212
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 35.1 bits (77), Expect = 0.014
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Frame = +3
Query: 6 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
N +G+GFV FE P AA A LN EG + + Q++ +
Sbjct: 146 NCKGYGFVDFESPQAAAAAVDGLN----TEGVQAQMAKLQQQEQ---------------- 185
Query: 186 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRXKGFGFVCFSS 350
NLY+ NL ++ L E FG + S +++ D + +G GF S
Sbjct: 186 ----DPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDS 237
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 35.1 bits (77), Expect = 0.014
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Frame = +3
Query: 6 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
N +G+GFV FE P AA A LN EG + + Q++ +
Sbjct: 120 NCKGYGFVDFESPQAAAAAVDGLN----TEGVQAQMAKLQQQEQ---------------- 159
Query: 186 LTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRXKGFGFVCFSS 350
NLY+ NL ++ L E FG + S +++ D + +G GF S
Sbjct: 160 ----DPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDS 211
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.1 bits (77), Expect = 0.014
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 201 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 308
G NL++ +L D L FAPFG I SAKV ++
Sbjct: 75 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 110
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 35.1 bits (77), Expect = 0.014
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK 176
S+G+GFV+F D + RA E++GK V +P+ + ++ K +K+K +Q K
Sbjct: 243 SKGYGFVSFRDSEDYVRAMREMDGK-YVGNRPIKLRKSAWKERNIDVIKQKRKQKK 297
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
+YV N+ + ++ L F +G + S +++ D KGFGFV S
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDS 99
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRA 122
S+GFGFV + ++ E+A L+ + V+G+ + V RA
Sbjct: 89 SKGFGFVTLDSIESCEKARAALH-ESHVQGRIIEVRRA 125
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 34.7 bits (76), Expect = 0.019
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRXKGFGFVCF 344
LYV + + ++ L F PFG + + + + E G+ +GFGFV F
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
Score = 31.1 bits (67), Expect = 0.23
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYV--GRAQKKAER-QKELKRKFEQL 173
G RGFGFV F+ + A A +N EL GK + V R K ER QK + E L
Sbjct: 49 GKHRGFGFVEFDMAEDAAMAIDNMNESELF-GKTIRVNFARPPKATERSQKPVWADDEWL 107
Query: 174 K 176
K
Sbjct: 108 K 108
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCFSS 350
+YV N+ + ++ L F +G + S +++ D KGFGFV S
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDS 99
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRA 122
S+GFGFV + ++ E+A L+ + V+G+ + V RA
Sbjct: 89 SKGFGFVTLDSIESCEKARAALH-ESHVQGRIIEVRRA 125
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 34.3 bits (75), Expect = 0.025
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 131
G RGF FV F + AA+RA + NG + G+ L V AQ +
Sbjct: 42 GRPRGFAFVEFTEEAAAQRAVDQFNGVDF-NGRALRVNLAQNR 83
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3
Query: 15 GFGFVAFEDPDAAERACIELNGKEL 89
GFGFV F+D AE A +LNGKEL
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKEL 61
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3
Query: 15 GFGFVAFEDPDAAERACIELNGKEL 89
GFGFV F+D AE A +LNGKEL
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKEL 61
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3
Query: 15 GFGFVAFEDPDAAERACIELNGKEL 89
GFGFV F+D AE A +LNGKEL
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKEL 61
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.033
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKS 179
G+ + F FV +E P+AA A +NG +++ G+ L V + R + + + +
Sbjct: 140 GHHKTFAFVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDM 198
Query: 180 ERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGR-XKGFGFVCFSS 350
+ + +YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 199 VQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 33.1 bits (72), Expect = 0.057
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 129 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 308
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 309 --DGRXKGFGFV 338
G K F FV
Sbjct: 137 PATGHHKTFAFV 148
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.033
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKS 179
G+ + F FV +E P+AA A +NG +++ G+ L V + R + + + +
Sbjct: 140 GHHKTFAFVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDM 198
Query: 180 ERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGR-XKGFGFVCFSS 350
+ + +YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 199 VQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 33.1 bits (72), Expect = 0.057
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 129 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 308
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 309 --DGRXKGFGFV 338
G K F FV
Sbjct: 137 PATGHHKTFAFV 148
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.9 bits (74), Expect = 0.033
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKS 179
G+ + F FV +E P+AA A +NG +++ G+ L V + R + + + +
Sbjct: 140 GHHKTFAFVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDM 198
Query: 180 ERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGR-XKGFGFVCFSS 350
+ + +YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 199 VQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 33.1 bits (72), Expect = 0.057
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 129 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 308
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 309 --DGRXKGFGFV 338
G K F FV
Sbjct: 137 PATGHHKTFAFV 148
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 32.7 bits (71), Expect = 0.076
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 15 GFGFVAFEDPDAAERACIELNGKEL 89
GFGFV F+D A+ A +LNGKEL
Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKEL 60
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 32.3 bits (70), Expect = 0.10
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 207 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRXKGFGFVCF 344
+++V N+ + ++ +R F+ G + S K++ E G+ KG+GF+ F
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRA 122
G +G+GF+ F D AE A LNG EL G+ L V A
Sbjct: 56 GKPKGYGFIEFPDIQTAEVAIRNLNGYEL-SGRILRVDSA 94
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 128
G RGF FV F + A+RA +LNG G+ L V A K
Sbjct: 44 GRPRGFAFVEFSEEAGAQRAVEQLNGVAF-NGRNLRVNYANK 84
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRA 122
SRG+GFV +D +AERAC + N +++G+ V A
Sbjct: 75 SRGYGFVTMKDRASAERACKDPN--PIIDGRKANVNLA 110
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 15 GFGFVAFEDPDAAERACIELNGKELVEGKPL 107
GF FV FED AE AC +L+GK + EG +
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 15 GFGFVAFEDPDAAERACIELNGKELVEGKPL 107
GF FV FED AE AC +L+GK + EG +
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 15 GFGFVAFEDPDAAERACIELNGKELVEGKPL 107
GF FV FED AE AC +L+GK + EG +
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER 140
GNS+G+ F + DP ++A LNG +L + K L V A +R
Sbjct: 328 GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGD-KQLVVQLACANQQR 372
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 54 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 170
E A IE +E E + L + A+K+AERQ+E+KRK E+
Sbjct: 945 ELAEIERKRRESEEKERLEI-EAKKEAERQREIKRKLEE 982
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER 140
GNS+G+ F + DP ++A LNG +L + K L V A +R
Sbjct: 328 GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGD-KQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER 140
GNS+G+ F + DP ++A LNG +L + K L V A +R
Sbjct: 303 GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGD-KQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER 140
GNS+G+ F + DP ++A LNG +L + K L V A +R
Sbjct: 306 GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGD-KQLVVQLACANQQR 350
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 311
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 30.7 bits (66), Expect = 0.31
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQ 125
S+GFGFV F + AE A +GK LV+G+ L V A+
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGK-LVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 30.7 bits (66), Expect = 0.31
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQ 125
S+GFGFV F + AE A +GK LV+G+ L V A+
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGK-LVDGRELRVTLAK 96
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYV 113
G SRG+ FV + + + A A +G E+ GKPL V
Sbjct: 238 GASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKV 274
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRXKGFGFVCFSS 350
++V + + LR+ F F + K++ DG+ KG+GF+ F +
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET 115
Score = 29.1 bits (62), Expect = 0.94
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKEL-VEGKPLYVGRAQKK 131
G S+G+GF+ FE D AE +L K+L + L +G A +K
Sbjct: 103 GQSKGYGFITFETEDQAEE-IRKLTPKQLEFRSRKLNLGPAIRK 145
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRXKGFGFVCFSS 350
++V + + LR+ F F + K++ DG+ KG+GF+ F +
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET 116
Score = 29.1 bits (62), Expect = 0.94
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKEL-VEGKPLYVGRAQKK 131
G S+G+GF+ FE D AE +L K+L + L +G A +K
Sbjct: 104 GQSKGYGFITFETEDQAEE-IRKLTPKQLEFRSRKLNLGPAIRK 146
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 29.9 bits (64), Expect = 0.54
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELN 77
G +GF FV FE D A RA ELN
Sbjct: 214 GLPKGFAFVTFESRDDAARAIAELN 238
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 29.9 bits (64), Expect = 0.54
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNG 80
+GFGFV F + +A+ +C LNG
Sbjct: 119 QGFGFVQFNEAGSADESCRSLNG 141
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 29.9 bits (64), Expect = 0.54
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 17/93 (18%)
Frame = +3
Query: 117 RAQKKAERQKELKRK-------FEQLKSERLTRYQGVN-LYVKNLDDTIDDERLRKEFAP 272
+AQK+ E +KE KRK E K L V+ +YV NL + I DE +K +
Sbjct: 142 KAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSK 201
Query: 273 FGTI------TSAKVML---EDGRXKGFGFVCF 344
G I K L E+G+ KG G C+
Sbjct: 202 CGVIQPDIRTNKPKCKLYREENGKLKGDGRCCY 234
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSER 185
+RGF + F + D A+++C +LN EL G+ + + + + +A K+ + Q +
Sbjct: 166 NRGFATITFRNADDAQKSCEQLNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDD 224
Query: 186 LTRYQGVNL 212
+ QG +L
Sbjct: 225 VGDRQGFSL 233
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSER 185
+RGF + F + D A+++C +LN EL G+ + + + + +A K+ + Q +
Sbjct: 311 NRGFATITFRNADDAQKSCEQLNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDD 369
Query: 186 LTRYQGVNL 212
+ QG +L
Sbjct: 370 VGDRQGFSL 378
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 12 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER 140
+G F+ F +AAERA K ++GK L + + +A+R
Sbjct: 274 KGCAFIEFTTREAAERAAERSFNKTFIKGKRLTIRWGEPQAKR 316
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 45 DAAERACIELNGKELVEGKPLYVGR--AQKKAERQKELKRKFEQLKSERLTRYQGVNLYV 218
+ A R C+E NG + + +P Y + + Q EL E ER Y +
Sbjct: 157 EMALRKCLEENGSAIKKSRPYYERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRAL 216
Query: 219 KNLDDTIDDER 251
+ + D I ER
Sbjct: 217 EQISDQIHQER 227
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 15 GFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 170
G+GFV F+ A++ +E++GK L GK + V A+ +K + E+
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTL-NGKLISVSWARPDTVGRKRKRPMSEE 181
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 131
G+ +GF +V FE+ A LNG + + L V RAQ++
Sbjct: 50 GSFKGFAYVTFENEQQMNTAISGLNGADF-GNRVLKVNRAQQR 91
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 117 RAQKKAERQKEL-KRKFEQLKSERLTR 194
RAQ+KA+ QKEL R+ EQ + E L R
Sbjct: 1257 RAQQKAQTQKELAARQAEQARVEELAR 1283
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Frame = +3
Query: 3 GNSRGFGFVAF---EDPDAA-ERAC-IELNGKEL 89
GNSRGFGF+ F ED AA ++ C +L+G ++
Sbjct: 114 GNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKI 147
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 135 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED- 311
ER+ L + KS T +Y+ L + + + F+ +G + + ++ +
Sbjct: 15 ERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKD 74
Query: 312 -GRXKGFGFVCF 344
G+ KGF F+C+
Sbjct: 75 TGKSKGFAFLCY 86
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEG--KPLYVGRAQKKAERQKELKRK 161
G SRG FV F + A A E++ + +EG PL V A ++ K++K K
Sbjct: 179 GKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 201 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 299
G++L TID E L EF FGT T A++
Sbjct: 81 GIHLRHGITKGTIDSEELISEFLNFGTTTPAQI 113
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 123 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 263
Q+ ER+K++ FE+ K E+L R + L+ KN + E+ +E
Sbjct: 256 QQNQEREKQINDDFEKRKLEKLQREK---LFEKNKQAKLQREKAHQE 299
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 123 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 248
Q+ ER+K++ FE+ E+L R + + + + I+D+
Sbjct: 227 QQNQEREKQINEDFEKRNQEKLKREEEIKQQNQEREKQINDD 268
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKS 179
G+S+G GFV F + + A +E++ + V G + + A + ER + R+F+ ++
Sbjct: 193 GSSKGSGFVRFGNQTDQQMALVEMH-RTKVGGCRIILKLAGSRGERLDRGESRQFKSQRN 251
Query: 180 ER 185
+R
Sbjct: 252 DR 253
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 81 KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 188
KE+VE K + +KK E+++E K K+E K E L
Sbjct: 349 KEIVEEK-----KEEKKEEKKEEKKEKYEDDKKEEL 379
>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical protein
ZK970.5 protein.
Length = 1143
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 156 RKFEQLKSERLTRY--QGVNLYVKNLDDTIDDERLRK 260
RK LT Y + V+ YV+NL D DDE +R+
Sbjct: 1097 RKIASFTDSELTNYSFRSVSPYVENLSDN-DDEEIRR 1132
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 27.1 bits (57), Expect = 3.8
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 DAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKN 224
++ E+A I+ +E V+G+P GR AER +E+ +K ++ + R + KN
Sbjct: 172 NSEEKALIQ---QEAVKGEPKNRGRPCGAAERSREVVKKLQKQPPRKRGRPLKI---AKN 225
Query: 225 LDDTIDDERLRKE--FAPFGTITS 290
++ I+ ++ K+ P T+ S
Sbjct: 226 MEPEINQKKDTKQVHVCPICTLAS 249
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +3
Query: 120 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD 245
A+KKA+R ++++FE++K++R R+Q + + +TIDD
Sbjct: 1087 ARKKAKR---IRQQFEKVKTDRYRRFQD---FFDPVANTIDD 1122
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +3
Query: 198 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGR 317
+ +YV NL + +E+L + + +GT+ ++ + GR
Sbjct: 817 EAATVYVDNLPEGCSEEKLLRLCSCYGTVVEVRISKKGGR 856
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 108 YVGRAQKKAERQKELKRKFEQLKSER 185
Y + QK+ +RQ+E +RK E L +ER
Sbjct: 392 YSNQVQKQMQRQRENRRKQELLIAER 417
>U00033-4|AAC48305.2| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 7 protein.
Length = 348
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = -3
Query: 198 DNELGVQISVVQTYASTPFDVQLSFVHVQHREAYPQLAL 82
++ L + + + Y+ST F + + FVHV +Y + +
Sbjct: 221 NSTLAAKFQLEEVYSSTKFSISVIFVHVTFFGSYTTITI 259
>Z68114-8|CAA92162.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.11 protein.
Length = 317
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -1
Query: 323 FXTSIF*HYLRRRNSPKWCKFFAQTFIINCIIQVLNIQINTLI 195
F T IF + + SPK+ + NCI Q +++ + L+
Sbjct: 18 FPTQIFLFVVVVKYSPKYMQTLRNVLFCNCIFQTISVVLLCLL 60
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 123 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 248
Q+ ER+K++ FE+ K E+L R + + + + I D+
Sbjct: 228 QQNQEREKQINDDFEKRKQEKLQREEEMKQQNQEREKLIADD 269
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGF 335
+YV N + +D+E L + F G + KV+L D R F
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPV--VKVILRDVRDSNAKF 54
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 210 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRXKGFGFVCF 344
LY+KNL I E + + F FG + +V +G FV +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG-NTAETRGTAFVVY 64
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Frame = +3
Query: 45 DAAERACIELNGKE---------LVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
DAAE A + G+E + E K A+K+AE ++ K+K EQL+ E+
Sbjct: 713 DAAENAVKQEGGEENPAAFIAPSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEK 768
>U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform e protein.
Length = 919
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 114 GRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTID 242
G A++ Q+ + + L+ + L RY V YV+ +D D
Sbjct: 382 GVAERTCNPQENVLQLVRNLRKDSLRRYHVVRFYVQEKEDPHD 424
>U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform b protein.
Length = 952
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 114 GRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTID 242
G A++ Q+ + + L+ + L RY V YV+ +D D
Sbjct: 415 GVAERTCNPQENVLQLVRNLRKDSLRRYHVVRFYVQEKEDPHD 457
>U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform a protein.
Length = 950
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 114 GRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTID 242
G A++ Q+ + + L+ + L RY V YV+ +D D
Sbjct: 413 GVAERTCNPQENVLQLVRNLRKDSLRRYHVVRFYVQEKEDPHD 455
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Frame = +3
Query: 45 DAAERACIELNGKE---------LVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 185
DAAE A + G+E + E K A+K+AE ++ K+K EQL+ E+
Sbjct: 713 DAAENAVKQEGGEENPAAFIAPSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEK 768
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,360,816
Number of Sequences: 27780
Number of extensions: 106545
Number of successful extensions: 733
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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