Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30260
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.8  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   2.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   4.9  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   4.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -2

Query: 146 LRHCCTIYSSSLHLIYYFCMH 84
           L  CC     ++HL++  C++
Sbjct: 266 LLFCCAFIIFTMHLLFLLCIY 286



 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = -2

Query: 146 LRHCCTIYSSSLHLIYYFCM 87
           L  CC     ++HL++  C+
Sbjct: 180 LLFCCAFIFFNMHLLFLLCL 199


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 337 MSAVVNKNPCP*SSNYPRGIRSEDCSWLKP 426
           + +++    C   + Y R +  E C++LKP
Sbjct: 73  LKSLIGSEDCLTLNVYTRDLPKEGCNFLKP 102


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 48  CSVFYHCGKFSSVHTEIIDQMQAG 119
           CS+FY+C  ++     +  +  AG
Sbjct: 434 CSIFYYCLAYNGGFVPLEQRCNAG 457


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 220 NGPENY*RTRVWW 258
           +GP  Y + RVWW
Sbjct: 156 HGPLMYGQPRVWW 168


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 462 LAPALNKLAENALGPGTG 515
           + P+L  LA    GPG G
Sbjct: 380 MGPSLTPLASPGCGPGQG 397


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 462 LAPALNKLAENALGPGTG 515
           + P+L  LA    GPG G
Sbjct: 380 MGPSLTPLASPGCGPGQG 397


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 153 SSGSEDSECEQGPDPDDV 206
           SSGS DS  +   DP  V
Sbjct: 381 SSGSTDSSSQSVEDPQQV 398


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 325 SQYAMSAVVNKNPCP 369
           S+Y +S  V+ NP P
Sbjct: 169 SKYVLSVTVSANPLP 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,390
Number of Sequences: 336
Number of extensions: 2157
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)