Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30260
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117358-1|AAI17359.1|  397|Homo sapiens GATA binding protein 5 ...    30   5.5  
BC117356-1|AAI17357.1|  397|Homo sapiens GATA binding protein 5 ...    30   5.5  
BC047790-1|AAH47790.1|  417|Homo sapiens GATA5 protein protein.        30   5.5  
AL499627-1|CAC36001.1|  397|Homo sapiens GATA binding protein 5 ...    30   5.5  
AK130638-1|BAC85400.1|  226|Homo sapiens protein ( Homo sapiens ...    29   9.7  

>BC117358-1|AAI17359.1|  397|Homo sapiens GATA binding protein 5
           protein.
          Length = 397

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 141 SETPSSGSEDSECEQGPDPDDVALTEEWARELLADAGVVG 260
           +  PS  S  S CE  P P ++A    WA+   AD+   G
Sbjct: 37  ARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFG 76


>BC117356-1|AAI17357.1|  397|Homo sapiens GATA binding protein 5
           protein.
          Length = 397

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 141 SETPSSGSEDSECEQGPDPDDVALTEEWARELLADAGVVG 260
           +  PS  S  S CE  P P ++A    WA+   AD+   G
Sbjct: 37  ARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFG 76


>BC047790-1|AAH47790.1|  417|Homo sapiens GATA5 protein protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 141 SETPSSGSEDSECEQGPDPDDVALTEEWARELLADAGVVG 260
           +  PS  S  S CE  P P ++A    WA+   AD+   G
Sbjct: 57  ARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFG 96


>AL499627-1|CAC36001.1|  397|Homo sapiens GATA binding protein 5
           protein.
          Length = 397

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 141 SETPSSGSEDSECEQGPDPDDVALTEEWARELLADAGVVG 260
           +  PS  S  S CE  P P ++A    WA+   AD+   G
Sbjct: 37  ARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFG 76


>AK130638-1|BAC85400.1|  226|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27128 fis, clone SPL07659. ).
          Length = 226

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
 Frame = +3

Query: 342 CSGEQKSLPVVVKLPPRDP---FGRLFVAEAQFDTREILFYTELAPALNKLAENALGPG 509
           C     S P +  +PP  P   FG  F+  A  +TR  +F   L   L  L     GPG
Sbjct: 52  CLSVSLSSPFLSSVPPPPPLMQFGPSFLQPANLETRTWIFIGRLGDFLTALGLCEKGPG 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,225,993
Number of Sequences: 237096
Number of extensions: 1576553
Number of successful extensions: 3447
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3438
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)