Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30258
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 25 1.1
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 25 1.1
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 25 1.1
AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related ... 25 1.1
AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein. 23 4.6
AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein. 23 4.6
AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein. 23 4.6
AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein. 23 4.6
AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein. 23 6.1
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 6.1
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 6.1
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 23 8.1
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 23 8.1
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 25.4 bits (53), Expect = 1.1
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 266 SGQSYELGEFQTTRFVGVDLLNKFLEDFLVEWL---PHHSQDISHEVTG 129
+GQ+ + +F RF DL++KF+ + E+L P H + +G
Sbjct: 130 AGQNIAITQFFGYRFTEKDLIHKFVSSWWSEYLDARPEHVRKYPSSYSG 178
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 25.4 bits (53), Expect = 1.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 482 HELVEVDGAASVSVDLLDEAIEFIVSQLLVQFPEDLAQA 366
H + E+ AA+VSV+++ EAI +L Q + QA
Sbjct: 274 HTVEELAAAANVSVEVIKEAIRVRQQELRAQKQYEKQQA 312
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 25.4 bits (53), Expect = 1.1
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 482 HELVEVDGAASVSVDLLDEAIEFIVSQLLVQFPEDLAQA 366
H + E+ AA+VSV+++ EAI V Q ++ PE + +A
Sbjct: 281 HTVEELAAAANVSVEVIKEAIR--VRQQELRGPEAVREA 317
>AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related 1
protein protein.
Length = 178
Score = 25.4 bits (53), Expect = 1.1
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 266 SGQSYELGEFQTTRFVGVDLLNKFLEDFLVEWL---PHHSQDISHEVTG 129
+GQ+ + +F RF DL++KF+ + E+L P H + +G
Sbjct: 130 AGQNIAITQFFGYRFTEKDLIHKFVSSWWSEYLDARPEHVRKYPSSYSG 178
>AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.4 bits (48), Expect = 4.6
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 234 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 371
++ P +T+ +F + + + A +K +++ F K G G PTSS+
Sbjct: 54 IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100
>AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.4 bits (48), Expect = 4.6
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 234 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 371
++ P +T+ +F + + + A +K +++ F K G G PTSS+
Sbjct: 54 IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100
>AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.4 bits (48), Expect = 4.6
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 234 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 371
++ P +T+ +F + + + A +K +++ F K G G PTSS+
Sbjct: 54 IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100
>AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.4 bits (48), Expect = 4.6
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 234 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 371
++ P +T+ +F + + + A +K +++ F K G G PTSS+
Sbjct: 54 IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100
>AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.0 bits (47), Expect = 6.1
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 234 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 371
++ P +T+ +F + + + A +K +++ F K G G PTSS+
Sbjct: 54 IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGATPTSSI 100
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.0 bits (47), Expect = 6.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 379 SSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSS 480
SSGNW++S + + S+ +T T P +S SS
Sbjct: 488 SSGNWSASSESGRTSIGSEITT-TNTHPKSSASS 520
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.0 bits (47), Expect = 6.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 379 SSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSS 480
SSGNW++S + + S+ +T T P +S SS
Sbjct: 489 SSGNWSASSESGRTSIGSEITT-TNTHPKSSASS 521
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.6 bits (46), Expect = 8.1
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -2
Query: 266 SGQSYELGEFQTTRFVGVDLLNKFLEDFLVEWLPHHSQDISHEV 135
S Q++ + + T F+G D L +FL ++ +H + +S ++
Sbjct: 334 SPQTHRMAPWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDL 377
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.6 bits (46), Expect = 8.1
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -2
Query: 266 SGQSYELGEFQTTRFVGVDLLNKFLEDFLVEWLPHHSQDISHEV 135
S Q++ + + T F+G D L +FL ++ +H + +S ++
Sbjct: 334 SPQTHRMAPWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDL 377
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,618
Number of Sequences: 2352
Number of extensions: 8057
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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