Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30255
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor...   251   6e-66
UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA...    51   2e-05
UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila pseudoobscu...    40   0.034
UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gamb...    38   0.14 
UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-P...    38   0.18 
UniRef50_UPI0000D56366 Cluster: PREDICTED: similar to CG30042-PA...    36   0.55 
UniRef50_Q7M4F2 Cluster: Endocuticle structural glycoprotein SgA...    32   6.8  
UniRef50_Q29QJ2 Cluster: IP05065p; n=6; Diptera|Rep: IP05065p - ...    32   8.9  
UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;...    32   8.9  

>UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor;
           n=1; Bombyx mori|Rep: Larval cuticle protein LCP-30
           precursor - Bombyx mori (Silk moth)
          Length = 239

 Score =  251 bits (615), Expect = 6e-66
 Identities = 123/171 (71%), Positives = 123/171 (71%)
 Frame = +3

Query: 3   LAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYNXXXX 182
           LAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN    
Sbjct: 15  LAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYNGDRG 74

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXKEDLSKYLGDAYKGSSIXXXXXXXXXXXXXXXXXX 362
                                    KEDLSKYLGDAYKGSSI                  
Sbjct: 75  DRGAAGGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLPVVKPTIPVPVTPTY 134

Query: 363 XASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENKI 515
            ASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENKI
Sbjct: 135 VASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENKI 185


>UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 275

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
 Frame = +3

Query: 390 YVASKVVPPSGAGY--DYKYGIIRYDNDVAPEGYHYLYETENKI 515
           YVA+ V   SGAGY  +  Y IIR +  V P+GYHY+YETENKI
Sbjct: 158 YVATPV-QGSGAGYYDNRNYAIIRKEEQVEPDGYHYVYETENKI 200



 Score = 31.9 bits (69), Expect = 8.9
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 129 NSGRYIPDNSGAYN 170
           N GRY PDNSGAYN
Sbjct: 25  NDGRYYPDNSGAYN 38


>UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila
           pseudoobscura|Rep: GA15599-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 264

 Score = 39.9 bits (89), Expect = 0.034
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 441 YGIIRYDNDVAPEGYHYLYETENKI 515
           + IIR ++DV  +GYHYLYETEN I
Sbjct: 164 WAIIRLEDDVEQDGYHYLYETENGI 188


>UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000023169 - Anopheles gambiae
           str. PEST
          Length = 232

 Score = 37.9 bits (84), Expect = 0.14
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = +3

Query: 375 VVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENKI 515
           V T   +A   V P  A     + IIR +N V  +GYHY++ETEN I
Sbjct: 151 VPTLARIAQVKVAPKPAYAPDGWKIIRLENQVENDGYHYVFETENGI 197


>UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 259

 Score = 37.5 bits (83), Expect = 0.18
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +3

Query: 441 YGIIRYDNDVAPEGYHYLYETENKI 515
           + IIR ++DV  +GYHYL+ETEN I
Sbjct: 159 WAIIRQEDDVEVDGYHYLWETENGI 183


>UniRef50_UPI0000D56366 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 210

 Score = 35.9 bits (79), Expect = 0.55
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 438 KYGIIRYDNDVAPEGYHYLYETENKI 515
           K+ IIR   DV  +GYH+ YETENKI
Sbjct: 110 KWKIIRQLGDVDTDGYHWEYETENKI 135


>UniRef50_Q7M4F2 Cluster: Endocuticle structural glycoprotein
           SgAbd-8; n=14; Neoptera|Rep: Endocuticle structural
           glycoprotein SgAbd-8 - Schistocerca gregaria (Desert
           locust)
          Length = 139

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 414 PSGAGYDYKYGIIRYDNDVAPEG-YHYLYETENKI 515
           PS +G      IIRY N+++P+G Y + YET N I
Sbjct: 8   PSYSGNTSPIPIIRYSNEISPDGSYAWSYETGNGI 42


>UniRef50_Q29QJ2 Cluster: IP05065p; n=6; Diptera|Rep: IP05065p -
           Drosophila melanogaster (Fruit fly)
          Length = 150

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 411 PPSGAGYDYKYGIIRYDNDVAPEG-YHYLYETENKI 515
           PP G  +D    I++ + D+ P+G Y Y YET N I
Sbjct: 46  PPRGNSFDANAVILKQNFDLNPDGSYQYNYETSNGI 81


>UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 645

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 402 CWQRMWV*PPCWQRMWV*LAREW*ASRRAGEQCW 301
           CWQR+ V   CWQR+ V +   W  +   GE CW
Sbjct: 78  CWQRVGVEEECWQRV-VAVEESWQRAGVVGE-CW 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,126,386
Number of Sequences: 1657284
Number of extensions: 6587187
Number of successful extensions: 20652
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20586
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)