Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30253
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0545 - 4756266-4757510                                           31   0.55 
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158...    27   6.8  
03_02_0080 + 5498638-5498699,5499121-5499190,5499551-5500711,550...    27   6.8  
03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413...    27   6.8  

>05_01_0545 - 4756266-4757510
          Length = 414

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 411 CKPS**YLRWRRQCS*VYRTSPR*CASFQ-QLYVPAP 304
           C P+  Y R  RQC+  Y   P  CA+FQ + +VP+P
Sbjct: 346 CLPNRPYQRTPRQCAAFYAAPPVDCAAFQCKPFVPSP 382


>09_01_0102 +
           1582793-1582898,1582988-1583093,1584115-1584172,
           1584676-1584745,1585132-1585197,1586374-1586429,
           1587992-1588078,1588819-1589139,1589827-1589946,
           1590747-1590881,1591529-1591605,1591681-1591756,
           1592800-1592874,1592971-1593075,1593299-1593374,
           1594482-1594617,1594702-1594804,1595186-1595298,
           1596907-1597111,1597173-1597301,1597403-1597517,
           1597710-1597795,1599108-1599203,1599615-1599751,
           1600374-1600476,1601809-1601888,1602013-1602091,
           1602241-1602298,1602489-1602586,1602673-1602767,
           1602861-1602918
          Length = 1074

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 402 RVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 512
           R+C    E+IA +E E  D+E I+ ++  ++   N +
Sbjct: 649 RLCTSLGEKIAEMESEIADMERIISQRTRDMKKPNDK 685


>03_02_0080 +
           5498638-5498699,5499121-5499190,5499551-5500711,
           5500940-5501029,5501147-5501464
          Length = 566

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 313 NVKLLKGGASSRRGAVNLRTLTTPT 387
           N K  KGGAS+ + A + RT T PT
Sbjct: 504 NGKAKKGGASTPKKAAHRRTTTVPT 528


>03_01_0555 +
           4132630-4132923,4133514-4133771,4134125-4134249,
           4134789-4134990,4135172-4135297,4135404-4135660,
           4135968-4136075,4136142-4136310,4136378-4136543,
           4136967-4136998,4137256-4137579,4137683-4137757,
           4138093-4138162,4138228-4138385,4138872-4139021
          Length = 837

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 390 DTIKRVCKDYHERIARLEDEKFDLEYIV 473
           +T  ++C+ Y E  A  +  KFDL YIV
Sbjct: 643 ETGPKICQKYIECPALFQGRKFDLRYIV 670


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,388,535
Number of Sequences: 37544
Number of extensions: 152769
Number of successful extensions: 454
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)