Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30246
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.18
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.24
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.24
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 30 0.24
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.31
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.31
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.41
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 29 0.55
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 28 0.72
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 28 0.95
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 28 0.95
SPCC553.07c |mug40||DinB translesion DNA repair polymerase|Schiz... 28 0.95
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 27 1.3
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 27 1.7
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 1.7
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 2.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 2.9
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 26 2.9
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 2.9
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 26 3.8
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 3.8
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.1
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 25 5.1
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 25 5.1
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 25 6.7
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 25 6.7
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 6.7
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 25 6.7
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 25 6.7
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.18
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 334 RGSGTPLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQP 483
+ S + P +P P + R P+ PP P P S P PS+ P
Sbjct: 117 KSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.24
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 367 PIPNASATPFRTPSPLPPSWRGPESLPRSTPVPP 468
P+P + P P LPPS P SLP P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPS--APPSLPMGAPAAP 447
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 349 PLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPP 468
PL P +PI PLPP+ P P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 3.8
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Frame = +1
Query: 361 RSPIPNASATPFRTPSPLPPSWRGPESLP-----RSTPVPP 468
+ PI N S+ P P PP S+P RS P PP
Sbjct: 324 KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 358 PRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPP 468
P +P+ SA P P+PP G S P ++P P
Sbjct: 241 PPERVPSLSAP---APPPIPPPSNGTVSSPPNSPPRP 274
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.24
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 355 APRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPP 468
AP P+P+A A P PS P P +P STP P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAP-----PVPIPTSTPPVP 1053
Score = 27.9 bits (59), Expect = 0.95
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 355 APRSPIPN-ASATPFRTPSP-LPPSWRGPESLPRSTPVPPSQ 474
AP P+P+ A P T +P +P S G S P P P S+
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.24
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 247 RHEDAQNLFKNAPNQIKLVIQRDVEREGLR---GSGTPLA-PRSPIPNASATPFRTPSPL 414
R ++ N N PN+ + RD +E + S PL P P+P+ A P +
Sbjct: 390 RDQNQGNRAYNPPNRNQAFSARDSRQEKTQPTNASPAPLVTPSLPVPSIPAVPGMEAMAM 449
Query: 415 PPSWRGPESLPRSTPVP 465
PP ++P ++ +P
Sbjct: 450 PPGVTSSIAVPTTSSMP 466
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.31
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +1
Query: 340 SGTPLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQPQL 489
S P+ P+S P + P TP P P S P S P PPS P L
Sbjct: 1688 STPPVRPQSAAPPQMSAP--TPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 355 APRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQPQLDGEY 501
AP S +P + ++ PSP PP+ + P + S+ P P Y
Sbjct: 1514 APSSTLPPSQSSFAHVPSPAPPAPQHPSAAALSS-APADNSMPHRSSPY 1561
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 352 LAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQPQL 489
+AP P+ S P R S PP P P VPP P +
Sbjct: 1681 MAPAHPV---STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPM 1723
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 29.5 bits (63), Expect = 0.31
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 337 GSGTPLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQPQL 489
GS T PR+ P + PS PS+ P S P P PS+ P L
Sbjct: 73 GSSTGSTPRTASPAVGNQDYSKPSYSQPSYSQP-SQPPKEPALPSRGTPSL 122
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 29.1 bits (62), Expect = 0.41
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +1
Query: 391 PFRTPS---PLPPSWRGPESLPRSTPVP 465
PFR PS P PP G S+PRST +P
Sbjct: 22 PFRQPSMNLPTPPHDDGLPSIPRSTALP 49
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 28.7 bits (61), Expect = 0.55
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 368 PYPTQAPHHSGLQARCLRHGVVRNLCLAAHRCHLR 472
P+ T PHH L A ++ V R CL + R
Sbjct: 42 PFATGRPHHGHLLASTIKDSVTRYACLKGYHVERR 76
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 28.3 bits (60), Expect = 0.72
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 145 PLIVTRVTPGTPAGRDLVRGDIIAKIDDYDARDLRHEDAQNLFKNAPNQIK 297
P + P T +D + G ++K DD D H + + K+ PN ++
Sbjct: 1108 PHVNVSAVPNTGNLKDALEGSAVSKTDDVDNVVSGHSNVNGVSKSRPNIVE 1158
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 27.9 bits (59), Expect = 0.95
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 340 SGTPL-APRSP-IPNASATPF---RTPSPLPPSWRGPESLPRSTPVPPSQFQPQLDGEYR 504
S PL A R+P P + +T +PSPLP S+R P + PS QPQ + R
Sbjct: 333 SSIPLPAERNPKTPQSFSTNIVQCASPSPLPLSFRSPVP-NKDYEYIPSSLQPQYSAQLR 391
Query: 505 TYL 513
L
Sbjct: 392 RVL 394
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.9 bits (59), Expect = 0.95
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 209 ISPRTKSLPAGVPGVTLVTMSGVARSAPPTSRSPQLISRES 87
ISP+T G+ ++ V +SG+ R + + +P LI S
Sbjct: 3275 ISPQTSVFELGLDSISAVALSGLLRKSGYDNANPSLILTSS 3315
>SPCC553.07c |mug40||DinB translesion DNA repair
polymerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 0.95
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 206 SPRTKSLPAGVPGVTLVTMSGVARSAPPTSRSPQLISRE 90
+P+ KSLP V L T + VAR S P+ I+R+
Sbjct: 149 NPKLKSLPMAVGKSVLCTANYVARKFGVRSAMPEFIARK 187
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 340 SGTPLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQP 483
S + + S I +S+TP P S ++P ++PVP + P
Sbjct: 81 SSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTP 128
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 370 IPNASATPFRTPSPLPPSWRGPESLPRSTPVPPS 471
I N+ +PF + S P + P L STP PP+
Sbjct: 209 ISNSHISPFASGSFSPFATSSPNFLSTSTPAPPN 242
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 373 PNASAT--PFRTPSPLPPSWRGPESLPRSTPVPPS 471
PNAS + P R P+P+P P+ TP+P S
Sbjct: 581 PNASPSVIPPRVPTPVPGRTLSPKPTRIPTPIPSS 615
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 352 LAPRSPIPNASATPFR-TPSPLPPSWRGPESLPRSTPVP 465
LAP S +P A +TP R T SP PP + PR P
Sbjct: 400 LAPTSNVP-AYSTPARPTESPPPPPISSSSTTPRPDDKP 437
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 2.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 346 TPLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQP 483
TP+AP+SP+ AS +P+ P + P ++ ST P ++P
Sbjct: 958 TPVAPQSPVAAASRIS-SSPNMPPSNPYTPIAVASSTVNPAHTYKP 1002
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 2.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 382 SATPFRTPS--PLPPSWRGPESLPRSTPVPPSQFQPQLD 492
SA TPS P+P + S +STPV P+ Q + D
Sbjct: 329 SAVDLTTPSSPPIPRHTKPKLSTTQSTPVKPASLQSEED 367
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Frame = +1
Query: 325 EGLRGSGTPLAPRSPIPNASATP-------FRTPSPLPPSWRGPESLPRSTPVPP 468
E GS +P +P+ S T ++P P PP+ P P PVPP
Sbjct: 699 ESFSGSEISSSPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPP 753
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.8 bits (54), Expect = 3.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 364 SPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQPQLDGEY 501
SP+P+AS SP PP+ S+ S V S+ P + +Y
Sbjct: 442 SPLPSASVPALGDGSPDPPA---APSIQNSLSVHESEMPPHVTRDY 484
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 403 PSPLPPSWRGPESLPRSTPVPPSQFQP 483
PS L PS P S P+PP+ F P
Sbjct: 474 PSNLVPSQNAPFIPGTSAPLPPTTFAP 500
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -3
Query: 493 RPVVAGIAK----VAPVCCEAEIPDHAMTEATGLES*MVWR 383
RP+ G +K VAPV C+ E DH + + E ++++
Sbjct: 4 RPLEIGFSKALTEVAPVTCQCECWDHNLCSSQASEMDLIYQ 44
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 364 SPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQP 483
SP +SA SP+ + +LP+ +P+PPS P
Sbjct: 183 SPDMKSSAAVTANVSPIQNVAQHVSTLPKISPIPPSNPPP 222
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 406 SPLPPSWRGPESLPRSTPVPPSQ 474
+PL W +S+P + P PPSQ
Sbjct: 107 APLNYYWPSYQSVPSAAPPPPSQ 129
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +1
Query: 283 PNQIKLVIQRDVEREGLRGSGTPLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPV 462
P ++ + V +G P A + P A FR PS PP + G P
Sbjct: 541 PTEVTAFTTQSVLASSAPSAGRPAAAQISRP---AQLFRIPSTNPPPFDGDVCPPACNTP 597
Query: 463 PPS 471
PP+
Sbjct: 598 PPN 600
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 352 LAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVP 465
L P+SPIP + +P PS R +S VP
Sbjct: 423 LQPKSPIPATKSYSATIQTPRSPSLRRADSTSHIIKVP 460
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.0 bits (52), Expect = 6.7
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 205 DIIAKIDDYDARDLRHEDAQNLFKNAPNQIKLVIQRDVEREGLRGSGTPLAPRSP 369
+ I K D D D ED++++ N+P+ + + + R++E E T +AP P
Sbjct: 2045 EFINKYPDIDI-DFEIEDSEDVHANSPSVLIVQLTRELE-EDEEVDTTVIAPYFP 2097
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 223 DDYDARDLRHEDAQNLFKNAPNQIKLVIQRDVEREG 330
++YD + D+ N KNA N IK + ++ EG
Sbjct: 408 NNYDNEIIEKVDSANSNKNATNDIKDLQTEEIVEEG 443
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 298 LVIQRDVEREGLRGSGTPLAPRSPIP 375
+VI V+ L G G P+ P PIP
Sbjct: 697 IVIVATVQALKLHGGGPPVGPGKPIP 722
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,321,026
Number of Sequences: 5004
Number of extensions: 49539
Number of successful extensions: 235
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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