Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30246
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.61 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   0.81 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   1.9  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    23   1.9  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    23   1.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.7  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   5.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   10.0 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   10.0 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   10.0 

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 415  PPSWR-GPESLPRSTPVPPSQFQPQL 489
            PP++  G  S+P+   +PPS  QP+L
Sbjct: 1269 PPAYSCGTVSVPQQQQLPPSSPQPRL 1294


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 403 PSPLPPSWRGPESLPRSTPVPPSQFQP 483
           P P P   + P++  R +P  PSQ  P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPP 47



 Score = 24.2 bits (50), Expect = 0.81
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 355 APRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQP 483
           AP  PIPN S       S +PP    P S+P + P  PS   P
Sbjct: 415 APMPPIPNMS-----NMSGMPPLPNMPGSMP-TMPTMPSMAGP 451


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 370 IPNASATPFRTPSPLPPSWRGPES 441
           +P      F T   LPP W G ES
Sbjct: 210 VPTLEELGFDTEGLLPPVWVGGES 233


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 264 LCVLVSKVTCVIIVDLRDDI 205
           +CVL +   C++I DL D++
Sbjct: 36  VCVLQANRACILIKDLFDNV 55


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 264 LCVLVSKVTCVIIVDLRDDI 205
           +CVL +   C++I DL D++
Sbjct: 19  VCVLQANRACILIKDLFDNV 38


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 376 NASATPFRTPSPLPPSWRGPES 441
           ++   P   P P PPS  GP+S
Sbjct: 334 DSDTPPKPAPPPPPPSSSGPDS 355


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 174  TWRHPCDNEWSGEV 133
            TW+ P   +W+GE+
Sbjct: 996  TWKPPPREDWNGEI 1009


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/62 (22%), Positives = 23/62 (37%)
 Frame = +3

Query: 303 HTKGRGTRRTERFRHATSATFAHTQRKRHTIQDSKPVASVMAWSGISASQHTGATFAIPA 482
           H K R  R+ +      +    HTQ + H    S P  S  + +  S    T +  +   
Sbjct: 644 HKKFRALRQKDSAEAEPAVIVQHTQSQLHLHLTSPPARSPSSQAQASQCPQTASLLSSTH 703

Query: 483 TT 488
           +T
Sbjct: 704 ST 705


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 352 LAPRSPIPNASATPFRTPSPLPP 420
           L+PR+PI N       T + L P
Sbjct: 27  LSPRTPIKNVYKNNIETKNQLSP 49


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 319 EREGLRGSGTPLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQP 483
           +R  +  +   LA +   P++ A+P   P       +     P +T V   + QP
Sbjct: 104 QRYNIAAANPLLAEKLAAPSSQASPTSIPYATRAEIKTESIQPETTKVDTREVQP 158


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 150 EWSGEVCAAHKP*SPVDLARIPPQGHYERMQSAHCVR 40
           EWS  V AA      V L R+  +   + + S +C+R
Sbjct: 392 EWSATVKAAISEVQRVVLGRLCEKVAKQLVNSVNCLR 428


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 150 EWSGEVCAAHKP*SPVDLARIPPQGHYERMQSAHCVR 40
           EWS  V AA      V L R+  +   + + S +C+R
Sbjct: 430 EWSATVKAAISEVQRVVLGRLCEKVAKQLVNSVNCLR 466


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 224 TIMTHVTFDTRT 259
           TI TH+  DTRT
Sbjct: 320 TIATHMGLDTRT 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,812
Number of Sequences: 438
Number of extensions: 4225
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)