Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30245
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   2.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   4.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +1

Query: 334  ISATTNAPEVLPAVIDSDSVAVPEPAPVTSESLVAP-VEVLAVC 462
            + A     E  P  + S +V VP P   T++SLV P  E   VC
Sbjct: 1785 VEAVEEEREEAPPSVHSSTV-VPPPQHSTTQSLVDPKSEFKVVC 1827


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 373 VIDSDSVAVPEPAPVTSESLVAPVEVLA 456
           V+ S S     P P + ESL  PV V++
Sbjct: 281 VLQSPSSTSSSPEPRSPESLFKPVTVIS 308


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 334 ISATTNAPEVLPAVIDSDS 390
           ISA  NAP V PA + S S
Sbjct: 187 ISALVNAPSVSPASLPSIS 205


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = +1

Query: 136 TSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIEDA 285
           T  P+   PP   S+      Q   +  + +PE  T     T T S  +A
Sbjct: 407 TPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTEA 456


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 161 GDNCLGGEVRGW 126
           GD  LGGEV  W
Sbjct: 513 GDGALGGEVCMW 524


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 385 DSVAVPEPAPVTSESLVAPV 444
           +SVA P P  V +E   +PV
Sbjct: 308 NSVATPTPTSVMTELYPSPV 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.305    0.121    0.331 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,564
Number of Sequences: 336
Number of extensions: 1963
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.1 bits)